SW 982 Gene Set

Dataset Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles
Category genomics
Type cell line
Description disease: synovial sarcoma (Cell Line Ontology, CLO_0009206)
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Genes

152 genes mutated in the SW 982 cell line from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.

Symbol Name
ACAD11 acyl-CoA dehydrogenase family, member 11
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6
ADCK4 aarF domain containing kinase 4
ANKRD39 ankyrin repeat domain 39
ARFIP1 ADP-ribosylation factor interacting protein 1
ARHGAP23 Rho GTPase activating protein 23
ARMC4 armadillo repeat containing 4
ASXL2 additional sex combs like transcriptional regulator 2
AXIN1 axin 1
B9D2 B9 protein domain 2
BCORL1 BCL6 corepressor-like 1
BHLHE40 basic helix-loop-helix family, member e40
BLOC1S4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
BOD1L1 biorientation of chromosomes in cell division 1-like 1
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRSK1 BR serine/threonine kinase 1
C10ORF54 chromosome 10 open reading frame 54
C8ORF31 chromosome 8 open reading frame 31
C8ORF58 chromosome 8 open reading frame 58
CACUL1 CDK2-associated, cullin domain 1
CAPN10 calpain 10
CBX8 chromobox homolog 8
CD320 CD320 molecule
CDC40 cell division cycle 40
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3
CERKL ceramide kinase-like
CLIP2 CAP-GLY domain containing linker protein 2
CLK1 CDC-like kinase 1
CMSS1 cms1 ribosomal small subunit homolog (yeast)
COL4A5 collagen, type IV, alpha 5
COL5A1 collagen, type V, alpha 1
COL5A2 collagen, type V, alpha 2
COPB1 coatomer protein complex, subunit beta 1
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
DICER1 dicer 1, ribonuclease type III
DNLZ DNL-type zinc finger
DYRK4 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
EDRF1 erythroid differentiation regulatory factor 1
EFCAB2 EF-hand calcium binding domain 2
EPB41 erythrocyte membrane protein band 4.1
EPHB2 EPH receptor B2
EXT1 exostosin glycosyltransferase 1
FAM200B family with sequence similarity 200, member B
FBXO30 F-box protein 30
FOXP4 forkhead box P4
GNA13 guanine nucleotide binding protein (G protein), alpha 13
GPAM glycerol-3-phosphate acyltransferase, mitochondrial
GSTCD glutathione S-transferase, C-terminal domain containing
HAUS5 HAUS augmin-like complex, subunit 5
HCP5 HLA complex P5 (non-protein coding)
HELLS helicase, lymphoid-specific
HSF1 heat shock transcription factor 1
HSPA1L heat shock 70kDa protein 1-like
HTT huntingtin
IDO1 indoleamine 2,3-dioxygenase 1
IFIT1B interferon-induced protein with tetratricopeptide repeats 1B
IFNAR2 interferon (alpha, beta and omega) receptor 2
IGF2R insulin-like growth factor 2 receptor
ILVBL ilvB (bacterial acetolactate synthase)-like
IMP4 IMP4, U3 small nucleolar ribonucleoprotein
INPP5A inositol polyphosphate-5-phosphatase, 40kDa
INTS1 integrator complex subunit 1
IQCC IQ motif containing C
IRF9 interferon regulatory factor 9
IRS2 insulin receptor substrate 2
ITCH itchy E3 ubiquitin protein ligase
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8
KDM2A lysine (K)-specific demethylase 2A
KDM4B lysine (K)-specific demethylase 4B
KIAA1109 KIAA1109
KIAA2018 KIAA2018
KIF15 kinesin family member 15
KIF26B kinesin family member 26B
KMT2D lysine (K)-specific methyltransferase 2D
KPNA5 karyopherin alpha 5 (importin alpha 6)
KRTAP1-3 keratin associated protein 1-3
KXD1 KxDL motif containing 1
LONP1 lon peptidase 1, mitochondrial
MAML2 mastermind-like 2 (Drosophila)
MARCH4 membrane-associated ring finger (C3HC4) 4, E3 ubiquitin protein ligase
MARS methionyl-tRNA synthetase
MECOM MDS1 and EVI1 complex locus
MKL2 MKL/myocardin-like 2
MRPS5 mitochondrial ribosomal protein S5
MRVI1 murine retrovirus integration site 1 homolog
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYO18A myosin XVIIIA
NALCN sodium leak channel, non selective
NEIL3 nei endonuclease VIII-like 3 (E. coli)
NKIRAS2 NFKB inhibitor interacting Ras-like 2
NOP2 NOP2 nucleolar protein
NOTCH3 notch 3
NPRL3 nitrogen permease regulator-like 3 (S. cerevisiae)
NRP1 neuropilin 1
OARD1 O-acyl-ADP-ribose deacylase 1
OPTN optineurin
OSBPL7 oxysterol binding protein-like 7
PAPPA pregnancy-associated plasma protein A, pappalysin 1
PBDC1 polysaccharide biosynthesis domain containing 1
PCBP4 poly(rC) binding protein 4
PHLDB3 pleckstrin homology-like domain, family B, member 3
PLSCR1 phospholipid scramblase 1
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D
PPP1R13B protein phosphatase 1, regulatory subunit 13B
PRKCSH protein kinase C substrate 80K-H
PRMT9 protein arginine methyltransferase 9
PRR12 proline rich 12
PTK2B protein tyrosine kinase 2 beta
PTPRA protein tyrosine phosphatase, receptor type, A
PTX3 pentraxin 3, long
PVRL4 poliovirus receptor-related 4
PXDN peroxidasin
RBSN rabenosyn, RAB effector
RGL2 ral guanine nucleotide dissociation stimulator-like 2
RPGRIP1L RPGRIP1-like
RTN2 reticulon 2
RUSC2 RUN and SH3 domain containing 2
S1PR1 sphingosine-1-phosphate receptor 1
SBNO2 strawberry notch homolog 2 (Drosophila)
SCAF1 SR-related CTD-associated factor 1
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
SESN1 sestrin 1
SF1 splicing factor 1
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
SIRPB1 signal-regulatory protein beta 1
SLC25A35 solute carrier family 25, member 35
SOS2 son of sevenless homolog 2 (Drosophila)
SPEG SPEG complex locus
ST5 suppression of tumorigenicity 5
STARD9 StAR-related lipid transfer (START) domain containing 9
STAU2 staufen double-stranded RNA binding protein 2
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
TECPR2 tectonin beta-propeller repeat containing 2
THSD4 thrombospondin, type I, domain containing 4
TIMM21 translocase of inner mitochondrial membrane 21 homolog (yeast)
TK2 thymidine kinase 2, mitochondrial
TLL1 tolloid-like 1
TMEM184B transmembrane protein 184B
TMEM80 transmembrane protein 80
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFRSF25 tumor necrosis factor receptor superfamily, member 25
TRANK1 tetratricopeptide repeat and ankyrin repeat containing 1
UBR5 ubiquitin protein ligase E3 component n-recognin 5
VASN vasorin
WDPCP WD repeat containing planar cell polarity effector
ZFHX3 zinc finger homeobox 3
ZNF496 zinc finger protein 496
ZNF512B zinc finger protein 512B
ZNF804A zinc finger protein 804A
ZRANB1 zinc finger, RAN-binding domain containing 1
ZSWIM6 zinc finger, SWIM-type containing 6