SW 900 Gene Set

Dataset Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles
Category genomics
Type cell line
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Genes

141 genes mutated in the SW 900 cell line from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.

Symbol Name
ACACB acetyl-CoA carboxylase beta
ACADSB acyl-CoA dehydrogenase, short/branched chain
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9
ADAP1 ArfGAP with dual PH domains 1
ADNP2 ADNP homeobox 2
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
AHCTF1 AT hook containing transcription factor 1
AHNAK AHNAK nucleoprotein
AK5 adenylate kinase 5
AKAP6 A kinase (PRKA) anchor protein 6
ALKBH4 alkB, alkylation repair homolog 4 (E. coli)
ANK1 ankyrin 1, erythrocytic
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
ASPSCR1 alveolar soft part sarcoma chromosome region, candidate 1
ATM ATM serine/threonine kinase
ATR ATR serine/threonine kinase
BOP1 block of proliferation 1
BTBD7 BTB (POZ) domain containing 7
C12ORF29 chromosome 12 open reading frame 29
C19ORF40 chromosome 19 open reading frame 40
CAPNS1 calpain, small subunit 1
CCDC132 coiled-coil domain containing 132
CCDC15 coiled-coil domain containing 15
CCDC88A coiled-coil domain containing 88A
CDC7 cell division cycle 7
CEP295 centrosomal protein 295kDa
CIAO1 cytosolic iron-sulfur assembly component 1
CMTM4 CKLF-like MARVEL transmembrane domain containing 4
CNTRL centriolin
COG7 component of oligomeric golgi complex 7
COL12A1 collagen, type XII, alpha 1
CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe)
DDHD1 DDHD domain containing 1
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DOCK1 dedicator of cytokinesis 1
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
EPHB4 EPH receptor B4
ERCC6 excision repair cross-complementation group 6
ERV3-1 endogenous retrovirus group 3, member 1
EXOC6 exocyst complex component 6
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase)
FAM20C family with sequence similarity 20, member C
FBXO45 F-box protein 45
FBXO6 F-box protein 6
FLRT2 fibronectin leucine rich transmembrane protein 2
FOXL1 forkhead box L1
GIGYF2 GRB10 interacting GYF protein 2
GPR87 G protein-coupled receptor 87
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa
HEATR3 HEAT repeat containing 3
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
HID1 HID1 domain containing
HLA-DRB4 major histocompatibility complex, class II, DR beta 4
HMX1 H6 family homeobox 1
HOXA9 homeobox A9
HPN hepsin
IL22RA1 interleukin 22 receptor, alpha 1
IL7R interleukin 7 receptor
INADL InaD-like (Drosophila)
INTS1 integrator complex subunit 1
ITGB4 integrin, beta 4
KDM3B lysine (K)-specific demethylase 3B
KIAA0368 KIAA0368
KIAA0825 KIAA0825
KIAA1324L KIAA1324-like
KIAA1683 KIAA1683
KMT2D lysine (K)-specific methyltransferase 2D
KRAS Kirsten rat sarcoma viral oncogene homolog
LDLRAD3 low density lipoprotein receptor class A domain containing 3
LIPE lipase, hormone-sensitive
LMTK3 lemur tyrosine kinase 3
LZTS1 leucine zipper, putative tumor suppressor 1
MAMLD1 mastermind-like domain containing 1
MAP10 microtubule-associated protein 10
MAP3K4 mitogen-activated protein kinase kinase kinase 4
MED1 mediator complex subunit 1
MIOS missing oocyte, meiosis regulator, homolog (Drosophila)
MPDZ multiple PDZ domain protein
MPP3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
MROH1 maestro heat-like repeat family member 1
MTMR4 myotubularin related protein 4
NARF nuclear prelamin A recognition factor
NAV2 neuron navigator 2
NBAS neuroblastoma amplified sequence
NEK1 NIMA-related kinase 1
NINL ninein-like
NIPAL4 NIPA-like domain containing 4
NPEPL1 aminopeptidase-like 1
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
OSBPL8 oxysterol binding protein-like 8
OXR1 oxidation resistance 1
PBLD phenazine biosynthesis-like protein domain containing
PDE12 phosphodiesterase 12
PEAK1 pseudopodium-enriched atypical kinase 1
PIGO phosphatidylinositol glycan anchor biosynthesis, class O
PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
PITRM1 pitrilysin metallopeptidase 1
PLCG1 phospholipase C, gamma 1
PLXND1 plexin D1
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
PPP2R1A protein phosphatase 2, regulatory subunit A, alpha
PTPN6 protein tyrosine phosphatase, non-receptor type 6
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1
RDH10 retinol dehydrogenase 10 (all-trans)
RIF1 replication timing regulatory factor 1
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
SAMD11 sterile alpha motif domain containing 11
SAV1 salvador family WW domain containing protein 1
SEC14L1 SEC14-like 1 (S. cerevisiae)
SFRP4 secreted frizzled-related protein 4
SH3BP1 SH3-domain binding protein 1
SLC25A27 solute carrier family 25, member 27
SLC37A2 solute carrier family 37 (glucose-6-phosphate transporter), member 2
SLFN13 schlafen family member 13
SMAD3 SMAD family member 3
SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SPAG5 sperm associated antigen 5
SPOCK3 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
SPRYD7 SPRY domain containing 7
SRCAP Snf2-related CREBBP activator protein
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
SYNE2 spectrin repeat containing, nuclear envelope 2
TBC1D8B TBC1 domain family, member 8B (with GRAM domain)
TENM3 teneurin transmembrane protein 3
TENM4 teneurin transmembrane protein 4
TMX1 thioredoxin-related transmembrane protein 1
TNK2 tyrosine kinase, non-receptor, 2
TNRC18 trinucleotide repeat containing 18
TP53 tumor protein p53
TRAM1 translocation associated membrane protein 1
TRPS1 trichorhinophalangeal syndrome I
TRPV1 transient receptor potential cation channel, subfamily V, member 1
UBE2H ubiquitin-conjugating enzyme E2H
WDR34 WD repeat domain 34
ZC3HC1 zinc finger, C3HC-type containing 1
ZMYM3 zinc finger, MYM-type 3
ZNF318 zinc finger protein 318
ZNF585B zinc finger protein 585B
ZNF621 zinc finger protein 621