NCI-N87 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Similar Terms
Downloads & Tools

Genes

49 genes with high or low copy number in NCI-N87 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
ARHGAP23 Rho GTPase activating protein 23 2.39327
MIR4727 microRNA 4727 2.39327
MIR4726 microRNA 4726 2.39327
LINC00672 long intergenic non-protein coding RNA 672 2.39327
LASP1 LIM and SH3 protein 1 2.39327
MIR4734 microRNA 4734 2.39327
C17ORF96 chromosome 17 open reading frame 96 2.39327
C17ORF98 chromosome 17 open reading frame 98 2.39327
SNORA21 small nucleolar RNA, H/ACA box 21 2.39327
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 2.39327
SRCIN1 SRC kinase signaling inhibitor 1 2.39327
RPL23 ribosomal protein L23 2.39327
CISD3 CDGSH iron sulfur domain 3 2.36889
PCGF2 polycomb group ring finger 2 2.36889
CWC25 CWC25 spliceosome-associated protein homolog (S. cerevisiae) 2.36889
LRRC37A11P leucine rich repeat containing 37, member A11, pseudogene 2.36889
PIP4K2B phosphatidylinositol-5-phosphate 4-kinase, type II, beta 2.36889
FBXO47 F-box protein 47 2.36889
PSMB3 proteasome (prosome, macropain) subunit, beta type, 3 2.36889
LOC100131347 RAD52 motif containing 1 pseudogene 2.35236
ARL5C ADP-ribosylation factor-like 5C 2.3178
PLXDC1 plexin domain containing 1 2.30944
CACNB1 calcium channel, voltage-dependent, beta 1 subunit 2.283
RPL19 ribosomal protein L19 2.283
STAC2 SH3 and cysteine rich domain 2 2.283
MED1 mediator complex subunit 1 2.24845
FBXL20 F-box and leucine-rich repeat protein 20 2.24845
GSDMB gasdermin B 2.22793
CDK12 cyclin-dependent kinase 12 2.22558
ZPBP2 zona pellucida binding protein 2 2.22291
NEUROD2 neuronal differentiation 2 2.22123
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 2.21258
STARD3 StAR-related lipid transfer (START) domain containing 3 2.21096
TCAP titin-cap 2.20309
PNMT phenylethanolamine N-methyltransferase 2.20309
ERBB2 erb-b2 receptor tyrosine kinase 2 2.20053
MIEN1 migration and invasion enhancer 1 2.20053
PGAP3 post-GPI attachment to proteins 3 2.20053
MIR4728 microRNA 4728 2.20053
GRB7 growth factor receptor-bound protein 7 2.20053
IKZF3 IKAROS family zinc finger 3 (Aiolos) 2.19863

low copy number

Symbol Name Standardized Value
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) -3.15836
ECRP ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) pseudogene -3.15836
PAXIP1 PAX interacting (with transcription-activation domain) protein 1 -3.14331
PTPRG protein tyrosine phosphatase, receptor type, G -3.06578
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28 -3.04299
FAM86DP family with sequence similarity 86, member D, pseudogene -2.84592
SMAD4 SMAD family member 4 -2.82872
LOC649352 ubiquitin carboxyl-terminal hydrolase 17-like protein 2-like -2.80262