NCI-H82 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

47 genes with high or low copy number in NCI-H82 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
GREB1L growth regulation by estrogen in breast cancer-like 2.93899
SLC7A8 solute carrier family 7 (amino acid transporter light chain, L system), member 8 2.76305
EXOC5 exocyst complex component 5 2.76305
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 2.76305
AP5M1 adaptor-related protein complex 5, mu 1 subunit 2.76305
BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2.64759
KCNH5 potassium channel, voltage gated eag related subfamily H, member 5 2.64759
PELI2 pellino E3 ubiquitin protein ligase family member 2 2.64759
C14ORF105 chromosome 14 open reading frame 105 2.64759
PPP1R3E protein phosphatase 1, regulatory subunit 3E 2.64759
HOMEZ homeobox and leucine zipper encoding 2.64759
MIR208A microRNA 208a 2.64759
PABPN1 poly(A) binding protein, nuclear 1 2.64759
NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2.64759
EFS embryonal Fyn-associated substrate 2.64759
SLC22A17 solute carrier family 22, member 17 2.64759
MYH6 myosin, heavy chain 6, cardiac muscle, alpha 2.64759
MYH7 myosin, heavy chain 7, cardiac muscle, beta 2.64759
C14ORF37 chromosome 14 open reading frame 37 2.64759
ACTR10 actin-related protein 10 homolog (S. cerevisiae) 2.64759
CMTM5 CKLF-like MARVEL transmembrane domain containing 5 2.64759
SLC35F4 solute carrier family 35, member F4 2.64759
BCL2L2 BCL2-like 2 2.64759
IL25 interleukin 25 2.64759
SDC2 syndecan 2 2.3178
CPQ carboxypeptidase Q 2.3178
CD8A CD8a molecule 2.14116
ANAPC1P1 anaphase promoting complex subunit 1 pseudogene 1 2.14116
CD8B CD8b molecule 2.14116
TRAC T cell receptor alpha constant 2.12595
OTX2 orthodenticle homeobox 2 2.12225
CCDC175 coiled-coil domain containing 175 2.12225
TMEM260 transmembrane protein 260 2.12225
OTX2-AS1 OTX2 antisense RNA 1 (head to head) 2.12225
TRD T cell receptor delta locus 2.1181
TRA T cell receptor alpha locus 2.11484
TRAV12-1 T cell receptor alpha variable 12-1 2.11435
RTN1 reticulon 1 2.10992
LRRC9 leucine rich repeat containing 9 2.10992
CCAT1 colon cancer associated transcript 1 (non-protein coding) 2.0614
POU5F1B POU class 5 homeobox 1B 2.05836
MIR1204 microRNA 1204 2.04661
PVT1 Pvt1 oncogene (non-protein coding) 2.04585

low copy number

Symbol Name Standardized Value
BANK1 B-cell scaffold protein with ankyrin repeats 1 -5.12655
FAM86DP family with sequence similarity 86, member D, pseudogene -2.84592
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3 -2.80776
CES1P1 carboxylesterase 1 pseudogene 1 -2.74485