NCI-H69 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description Human Caucasian lung small cell carcinoma cell line. (BRENDA Tissue and Enzyme Source Ontology, BTO_0003022)
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Genes

37 genes with high or low copy number in NCI-H69 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
ASB3 ankyrin repeat and SOCS box containing 3 3.12177
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 2.18124
MYCNOS MYCN opposite strand 2.18124
FGD4 FYVE, RhoGEF and PH domain containing 4 2.07338
KIAA1551 KIAA1551 2.06989
H3F3C H3 histone, family 3C 2.06989
RNU6-78P RNA, U6 small nuclear 78, pseudogene 2.06989
METTL20 methyltransferase like 20 2.06626
AMN1 antagonist of mitotic exit network 1 homolog (S. cerevisiae) 2.06626
DENND5B-AS1 DENND5B antisense RNA 1 2.06626
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 2.06473
BICD1 bicaudal D homolog 1 (Drosophila) 2.06473
TSPAN11 tetraspanin 11 2.06473
DENND5B DENN/MADD domain containing 5B 2.06473
DDX11-AS1 DDX11 antisense RNA 1 2.06473
FAM60A family with sequence similarity 60, member A 2.06316
LINC00941 long intergenic non-protein coding RNA 941 2.06316
OVOS2 ovostatin 2 2.06316
FLJ13224 uncharacterized LOC79857 2.06316
SNORA75 small nucleolar RNA, H/ACA box 75 2.06233
IPO8 importin 8 2.0622
CAPRIN2 caprin family member 2 2.0622

low copy number

Symbol Name Standardized Value
ZNF503 zinc finger protein 503 -3.38669
ZNF503-AS2 ZNF503 antisense RNA 2 -3.38669
MIR4799 microRNA 4799 -3.2703
SCN2A sodium channel, voltage gated, type II alpha subunit -3.12964
SNORA70F small nucleolar RNA, H/ACA box 70F -3.12964
SCN3A sodium channel, voltage gated, type III alpha subunit -3.12964
GRB14 growth factor receptor-bound protein 14 -3.12964
CSRNP3 cysteine-serine-rich nuclear protein 3 -3.11641
LOC100272216 uncharacterized LOC100272216 -3.11641
GTF2H2C GTF2H2 family member C -3.11641
GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 -3.11641
GUSBP3 glucuronidase, beta pseudogene 3 -3.11641
SLC38A11 solute carrier family 38, member 11 -3.05881
COBLL1 cordon-bleu WH2 repeat protein-like 1 -3.05881
WWOX WW domain containing oxidoreductase -2.94448