NCI-H64 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

154 genes with high or low copy number in NCI-H64 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
CCL3L1 chemokine (C-C motif) ligand 3-like 1 3.12177
TBC1D3B TBC1 domain family, member 3B 3.12177
CCL3L3 chemokine (C-C motif) ligand 3-like 3 3.12177
NTF3 neurotrophin 3 2.76305
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5 2.76305
KCNA6 potassium channel, voltage gated shaker related subfamily A, member 6 2.64759
LOC100507424 uncharacterized LOC100507424 2.64759
CACNA1C-AS1 CACNA1C antisense RNA 1 2.64759
ITFG2 integrin alpha FG-GAP repeat containing 2 2.64759
LOC283440 uncharacterized LOC283440 2.64759
NRIP2 nuclear receptor interacting protein 2 2.64759
RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 2.64759
FOXM1 forkhead box M1 2.64759
FKBP4 FK506 binding protein 4, 59kDa 2.64759
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1 2.64759
TULP3 tubby like protein 3 2.59653
NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa 2.59653
TEAD4 TEA domain family member 4 2.59653
TSPAN9 tetraspanin 9 2.59653
GALNT8 polypeptide N-acetylgalactosaminyltransferase 8 2.59653
AKAP3 A kinase (PRKA) anchor protein 3 2.59653
FGF6 fibroblast growth factor 6 2.49065
DYRK4 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 2.49065
C12ORF4 chromosome 12 open reading frame 4 2.49065
RAD51AP1 RAD51 associated protein 1 2.49065
CACNA1C-IT3 CACNA1C intronic transcript 3 2.44392
FGF23 fibroblast growth factor 23 2.44392
WNK1 WNK lysine deficient protein kinase 1 2.41451
TIGAR TP53 induced glycolysis regulatory phosphatase 2.41451
CCND2 cyclin D2 2.41451
CACNA1C-AS4 CACNA1C antisense RNA 4 2.41451
RAD52 RAD52 homolog (S. cerevisiae) 2.41451
FBXL14 F-box and leucine-rich repeat protein 14 2.39327
MIR3649 microRNA 3649 2.39327
LINC00942 long intergenic non-protein coding RNA 942 2.39327
WNT5B wingless-type MMTV integration site family, member 5B 2.39327
LINC00940 long intergenic non-protein coding RNA 940 2.36889
DCP1B decapping mRNA 1B 2.36889
ADIPOR2 adiponectin receptor 2 2.36889
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 2.36889
CACNA2D4 calcium channel, voltage-dependent, alpha 2/delta subunit 4 2.35236
LRTM2 leucine-rich repeats and transmembrane domains 2 2.35236
DROSHA drosha, ribonuclease type III 2.20053
C5ORF22 chromosome 5 open reading frame 22 2.20053
TARS threonyl-tRNA synthetase 2.20053
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit 2.19863
NPR3 natriuretic peptide receptor 3 2.19863
TTC33 tetratricopeptide repeat domain 33 2.19863
LOC100506548 uncharacterized LOC100506548 2.19863
RPL37 ribosomal protein L37 2.19863
SUB1 SUB1 homolog (S. cerevisiae) 2.19863
SNORD72 small nucleolar RNA, C/D box 72 2.19863
RXFP3 relaxin/insulin-like family peptide receptor 3 2.19863
CARD6 caspase recruitment domain family, member 6 2.19863
LOC340113 uncharacterized LOC340113 2.19863
C1QTNF3 C1q and tumor necrosis factor related protein 3 2.19301
AMACR alpha-methylacyl-CoA racemase 2.19301
SLC45A2 solute carrier family 45, member 2 2.19301
MROH2B maestro heat-like repeat family member 2B 2.19301
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3 2.19301
PTGER4 prostaglandin E receptor 4 (subtype EP4) 2.19301
C7 complement component 7 2.19301
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 2.18778
RICTOR RPTOR independent companion of MTOR, complex 2 2.18778
SPEF2 sperm flagellar 2 2.18778
MIR3650 microRNA 3650 2.18778
GDNF glial cell derived neurotrophic factor 2.18778
EGFLAM EGF-like, fibronectin type III and laminin G domains 2.18778
NUP155 nucleoporin 155kDa 2.18778
EGFLAM-AS4 EGFLAM antisense RNA 4 2.18778
C9 complement component 9 2.18778
WDR70 WD repeat domain 70 2.18778
GDNF-AS1 GDNF antisense RNA 1 (head to head) 2.18778
C5ORF42 chromosome 5 open reading frame 42 2.18778
EGFLAM-AS2 EGFLAM antisense RNA 2 2.18778
C6 complement component 6 2.18778
IL7R interleukin 7 receptor 2.18778
FYB FYN binding protein 2.18778
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 2.18778
LIFR leukemia inhibitory factor receptor alpha 2.18778
ZNF131 zinc finger protein 131 2.18124
LOC648987 uncharacterized LOC648987 2.18124
LOC153684 uncharacterized LOC153684 2.18124
CAPSL calcyphosine-like 2.18124
LOC100506639 uncharacterized LOC100506639 2.18124
FBXO4 F-box protein 4 2.18124
GHR growth hormone receptor 2.18124
ANXA2R annexin A2 receptor 2.18124
LOC100132356 uncharacterized LOC100132356 2.18124
C5ORF51 chromosome 5 open reading frame 51 2.18124
LOC646719 2.18124
NIPBL Nipped-B homolog (Drosophila) 2.18124
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 2.18124
CCL28 chemokine (C-C motif) ligand 28 2.18124
OXCT1 3-oxoacid CoA transferase 1 2.18124
OSMR oncostatin M receptor 2.18124
MRPS30 mitochondrial ribosomal protein S30 2.17694
C5ORF34 chromosome 5 open reading frame 34 2.17694
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1 2.17694
UGT3A2 UDP glycosyltransferase 3 family, polypeptide A2 2.17694
CCDC152 coiled-coil domain containing 152 2.17694
PAIP1 poly(A) binding protein interacting protein 1 2.17694
RANBP3L RAN binding protein 3-like 2.17694
SEPP1 selenoprotein P, plasma, 1 2.17694
C5ORF28 chromosome 5 open reading frame 28 2.17694
LMBRD2 LMBR1 domain containing 2 2.17694
MIR580 microRNA 580 2.17694
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 2.17694
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 2.16947
BRIX1 BRX1, biogenesis of ribosomes 2.16947
RAD1 RAD1 checkpoint DNA exonuclease 2.16947
FGF10 fibroblast growth factor 10 2.16947
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 2.16947
RAI14 retinoic acid induced 14 2.16947
PRLR prolactin receptor 2.16947
AGXT2 alanine--glyoxylate aminotransferase 2 2.16947
TTC23L tetratricopeptide repeat domain 23-like 2.16947
NNT nicotinamide nucleotide transhydrogenase 2.16816
LOC340107 uncharacterized LOC340107 2.16307
PRMT8 protein arginine methyltransferase 8 2.09431
PARP11 poly (ADP-ribose) polymerase family, member 11 2.09431
SLCO1C1 solute carrier organic anion transporter family, member 1C1 2.07822
AEBP2 AE binding protein 2 2.07776
PDE3A phosphodiesterase 3A, cGMP-inhibited 2.07558
LOC100506393 uncharacterized LOC100506393 2.07558
ERC1 ELKS/RAB6-interacting/CAST family member 1 2.0752
PLEKHA5 pleckstrin homology domain containing, family A member 5 2.0752
SLCO1B3 solute carrier organic anion transporter family, member 1B3 2.07346
SLCO1B7 solute carrier organic anion transporter family, member 1B7 (non-functional) 2.07338
SLCO1B1 solute carrier organic anion transporter family, member 1B1 2.07338
IAPP islet amyloid polypeptide 2.07018
PYROXD1 pyridine nucleotide-disulphide oxidoreductase domain 1 2.06989
GOLT1B golgi transport 1B 2.06989
RECQL RecQ helicase-like 2.06989
SLCO1A2 solute carrier organic anion transporter family, member 1A2 2.06707
LDHB lactate dehydrogenase B 2.06626
GYS2 glycogen synthase 2 (liver) 2.06626
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8 2.06316
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 2.0615
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase 2.06105
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 2.06105
ETNK1 ethanolamine kinase 1 2.05973
C2CD5 C2 calcium-dependent domain containing 5 2.05965
ZFR zinc finger RNA binding protein 2.05311
MTMR12 myotubularin related protein 12 2.05311
MIR4279 microRNA 4279 2.05311
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 2.05242
PDZD2 PDZ domain containing 2 2.0521
GOLPH3 golgi phosphoprotein 3 (coat-protein) 2.0521
LSP1P3 lymphocyte-specific protein 1 pseudogene 3 2.05072
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 2.05045
CDH9 cadherin 9, type 2 (T1-cadherin) 2.04969

low copy number

Symbol Name Standardized Value
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -3.40381
HCG4B HLA complex group 4B (non-protein coding) -2.75184