NCI-H630 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: carcinoma (rectum primary) (Cell Line Ontology, CLO_0008099)
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Genes

22 genes with high or low copy number in NCI-H630 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
WDR66 WD repeat domain 66 3.12177
LINC00934 long intergenic non-protein coding RNA 934 2.93899
TMEM233 transmembrane protein 233 2.93899
CCDC60 coiled-coil domain containing 60 2.93899
MGAT4C MGAT4 family, member C 2.93899
SCN8A sodium channel, voltage gated, type VIII alpha subunit 2.93899
CAND1 cullin-associated and neddylation-dissociated 1 2.49065
LOH12CR1 loss of heterozygosity, 12, chromosomal region 1 2.44392
CREBL2 cAMP responsive element binding protein-like 2 2.10177
GPR19 G protein-coupled receptor 19 2.10038
DUSP16 dual specificity phosphatase 16 2.09431
DNM1L dynamin 1-like 2.06626
YARS2 tyrosyl-tRNA synthetase 2, mitochondrial 2.06473
LRMP lymphoid-restricted membrane protein 2.05242
CASC1 cancer susceptibility candidate 1 2.0521
LYRM5 LYR motif containing 5 2.0521
KRAS Kirsten rat sarcoma viral oncogene homolog 2.05093

low copy number

Symbol Name Standardized Value
BRCA1 breast cancer 1, early onset -3.24687
MACROD2-AS1 MACROD2 antisense RNA 1 -2.81384
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1 -2.80688
OR2T11 olfactory receptor, family 2, subfamily T, member 11 (gene/pseudogene) -2.78432
OR2T10 olfactory receptor, family 2, subfamily T, member 10 -2.78237