NCI-H522 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

135 genes with high or low copy number in NCI-H522 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
PXT1 peroxisomal, testis specific 1 3.12177
PNPLA1 patatin-like phospholipase domain containing 1 3.12177
MRS2 MRS2 magnesium transporter 3.12177
NRSN1 neurensin 1 3.12177
KCTD20 potassium channel tetramerization domain containing 20 3.12177
ZSCAN16 zinc finger and SCAN domain containing 16 3.12177
HIST1H2AM histone cluster 1, H2am 3.12177
C6ORF222 chromosome 6 open reading frame 222 3.12177
MIR3925 microRNA 3925 3.12177
RAB44 RAB44, member RAS oncogene family 3.12177
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1 3.12177
ZNF165 zinc finger protein 165 3.12177
ZKSCAN8 zinc finger with KRAB and SCAN domains 8 3.12177
MAPK14 mitogen-activated protein kinase 14 3.12177
MAPK13 mitogen-activated protein kinase 13 3.12177
SRSF3 serine/arginine-rich splicing factor 3 3.12177
HIST1H3J histone cluster 1, H3j 3.12177
OR2B6 olfactory receptor, family 2, subfamily B, member 6 3.12177
STK38 serine/threonine kinase 38 3.12177
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 3.12177
DCDC2 doublecortin domain containing 2 3.12177
KAAG1 kidney associated antigen 1 3.12177
HIST1H2BO histone cluster 1, H2bo 3.12177
GPLD1 glycosylphosphatidylinositol specific phospholipase D1 3.12177
BRPF3 bromodomain and PHD finger containing, 3 3.12177
ETV7 ets variant 7 3.12177
ZNF192P1 zinc finger protein 192 pseudogene 1 3.12177
PPARD peroxisome proliferator-activated receptor delta 2.93899
PI16 peptidase inhibitor 16 2.93899
HIST1H2AA histone cluster 1, H2aa 2.93899
HIST1H2BA histone cluster 1, H2ba 2.93899
KIAA0319 KIAA0319 2.93899
CCDC167 coiled-coil domain containing 167 2.93899
TBC1D22B TBC1 domain family, member 22B 2.93899
GMNN geminin, DNA replication inhibitor 2.93899
PPIL1 peptidylprolyl isomerase (cyclophilin)-like 1 2.93899
ZFAND3 zinc finger, AN1-type domain 3 2.93899
BMP5 bone morphogenetic protein 5 2.93899
RNF8 ring finger protein 8, E3 ubiquitin protein ligase 2.93899
DEF6 differentially expressed in FDCP 6 homolog (mouse) 2.93899
HIST1H2APS1 histone cluster 1, H2a, pseudogene 1 2.93899
RPL10A ribosomal protein L10a 2.93899
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2 2.93899
TMEM217 transmembrane protein 217 2.93899
SLC26A8 solute carrier family 26 (anion exchanger), member 8 2.93899
SCGN secretagogin, EF-hand calcium binding protein 2.93899
LRRC16A leucine rich repeat containing 16A 2.93899
SRPK1 SRSF protein kinase 1 2.93899
TDP2 tyrosyl-DNA phosphodiesterase 2 2.93899
ACOT13 acyl-CoA thioesterase 13 2.93899
FANCE Fanconi anemia, complementation group E 2.93899
MTCH1 mitochondrial carrier 1 2.93899
SLC17A3 solute carrier family 17 (organic anion transporter), member 3 2.93899
SLC17A2 solute carrier family 17, member 2 2.93899
SLC17A1 solute carrier family 17 (organic anion transporter), member 1 2.93899
SLC17A4 solute carrier family 17, member 4 2.93899
ZNF76 zinc finger protein 76 2.93899
TEAD3 TEA domain family member 3 2.93899
MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 2.93899
CLPSL2 colipase-like 2 2.93899
CLPSL1 colipase-like 1 2.93899
FGD2 FYVE, RhoGEF and PH domain containing 2 2.93899
C6ORF62 chromosome 6 open reading frame 62 2.93899
CLPS colipase, pancreatic 2.93899
CMAHP cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene 2.93899
ALDH5A1 aldehyde dehydrogenase 5 family, member A1 2.93899
MIR4462 microRNA 4462 2.93899
LHFPL5 lipoma HMGIC fusion partner-like 5 2.93899
RNF144B ring finger protein 144B 2.76305
LGSN lengsin, lens protein with glutamine synthetase domain 2.76305
GMPR guanosine monophosphate reductase 2.76305
ATXN1 ataxin 1 2.76305
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 2.76305
GFOD1 glucose-fructose oxidoreductase domain containing 1 2.76305
NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 2.76305
FAM65B family with sequence similarity 65, member B 2.76305
PIM1 Pim-1 proto-oncogene, serine/threonine kinase 2.76305
MIR548A1 microRNA 548a-1 2.76305
MIR586 microRNA 586 2.76305
C6ORF89 chromosome 6 open reading frame 89 2.76305
SCUBE3 signal peptide, CUB domain, EGF-like 3 2.76305
KDM1B lysine (K)-specific demethylase 1B 2.76305
BTBD9 BTB (POZ) domain containing 9 2.76305
TPMT thiopurine S-methyltransferase 2.76305
DEK DEK proto-oncogene 2.76305
STMND1 stathmin domain containing 1 2.64759
NUP153 nucleoporin 153kDa 2.64759
MBOAT1 membrane bound O-acyltransferase domain containing 1 2.64759
RANBP9 RAN binding protein 9 2.64759
FAM8A1 family with sequence similarity 8, member A1 2.64759
CD83 CD83 molecule 2.64759
RBM24 RNA binding motif protein 24 2.64759
RNF182 ring finger protein 182 2.64759
NOL7 nucleolar protein 7, 27kDa 2.64759
KIF13A kinesin family member 13A 2.64759
CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 2.64759
MCUR1 mitochondrial calcium uniporter regulator 1 2.64759
SIRT5 sirtuin 5 2.64759
GLP1R glucagon-like peptide 1 receptor 2.59653
TBC1D7 TBC1 domain family, member 7 2.59653
DNAH8 dynein, axonemal, heavy chain 8 2.59653
ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein 2.59653
LOC100130357 uncharacterized LOC100130357 2.59653
GLO1 glyoxalase I 2.59653
KCNK5 potassium channel, two pore domain subfamily K, member 5 2.59653
HDGFL1 hepatoma derived growth factor-like 1 2.59653
PRL prolactin 2.59653
SAYSD1 SAYSVFN motif domain containing 1 2.59653
KCNK17 potassium channel, two pore domain subfamily K, member 17 2.59653
KCNK16 potassium channel, two pore domain subfamily K, member 16 2.59653
LOC100131047 uncharacterized LOC100131047 2.59653
SOX4 SRY (sex determining region Y)-box 4 2.59653
DAAM2 dishevelled associated activator of morphogenesis 2 2.49065
MOCS1 molybdenum cofactor synthesis 1 2.49065
E2F3 E2F transcription factor 3 2.49065
PTP4A1 protein tyrosine phosphatase type IVA, member 1 2.49065
KIF6 kinesin family member 6 2.44392
PDGFC platelet derived growth factor C 2.14116
CPNE5 copine V 2.14116
OR2B2 olfactory receptor, family 2, subfamily B, member 2 2.14116
TULP1 tubby like protein 1 2.12703
ARMC12 armadillo repeat containing 12 2.12703
MIR5690 microRNA 5690 2.12703
LOC285847 uncharacterized LOC285847 2.12703
GLRB glycine receptor, beta 2.12703
FKBP5 FK506 binding protein 5 2.12703
RUNX2 runt-related transcription factor 2 2.12225
JARID2 jumonji, AT rich interactive domain 2 2.10177
DTNBP1 dystrobrevin binding protein 1 2.10038
PHACTR1 phosphatase and actin regulator 1 2.09431
PHF3 PHD finger protein 3 2.09431
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 2.09161
EYS eyes shut homolog (Drosophila) 2.08391
TRPS1 trichorhinophalangeal syndrome I 2.05422

low copy number

Symbol Name Standardized Value
RHD Rh blood group, D antigen -3.17091