NCI-H508 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: colorectal adenocarcinoma (Cell Line Ontology, CLO_0008091)
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Genes

446 genes with high or low copy number in NCI-H508 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
SIAH3 siah E3 ubiquitin protein ligase family member 3 4.51153
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 4.51153
ZC3H13 zinc finger CCCH-type containing 13 4.51153
MED4 mediator complex subunit 4 4.51153
CPB2 carboxypeptidase B2 (plasma) 4.51153
SLC25A30 solute carrier family 25, member 30 4.51153
LRRC63 leucine rich repeat containing 63 4.51153
SPERT spermatid associated 4.51153
LINC00563 long intergenic non-protein coding RNA 563 4.51153
NUDT15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 4.51153
KIAA0226L KIAA0226-like 4.51153
CPB2-AS1 CPB2 antisense RNA 1 4.51153
LCP1 lymphocyte cytosolic protein 1 (L-plastin) 4.51153
TPT1 tumor protein, translationally-controlled 1 4.51153
TPT1-AS1 TPT1 antisense RNA 1 4.51153
COG3 component of oligomeric golgi complex 3 4.51153
SUCLA2 succinate-CoA ligase, ADP-forming, beta subunit 4.51153
MED4-AS1 MED4 antisense RNA 1 4.51153
UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast) 3.12177
PROSER1 proline and serine rich 1 3.12177
UFM1 ubiquitin-fold modifier 1 3.12177
CKAP2 cytoskeleton associated protein 2 3.12177
SLAIN1 SLAIN motif family, member 1 3.12177
MIR320D1 microRNA 320d-1 3.12177
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 3.12177
TSC22D1-AS1 TSC22D1 antisense RNA 1 3.12177
LINC00457 long intergenic non-protein coding RNA 457 3.12177
IRG1 immunoresponsive 1 homolog (mouse) 3.12177
LINC00284 long intergenic non-protein coding RNA 284 3.12177
MRPS31 mitochondrial ribosomal protein S31 3.12177
LINC00282 long intergenic non-protein coding RNA 282 3.12177
NHLRC3 NHL repeat containing 3 3.12177
MIR548F5 microRNA 548f-5 3.12177
VWA8-AS1 VWA8 antisense RNA 1 (head to head) 3.12177
EFNB2 ephrin-B2 3.12177
SERP2 stress-associated endoplasmic reticulum protein family member 2 3.12177
LINC00330 long intergenic non-protein coding RNA 330 3.12177
LINC00366 long intergenic non-protein coding RNA 366 3.12177
DCLK1 doublecortin-like kinase 1 3.12177
LINC00460 long intergenic non-protein coding RNA 460 3.12177
LINC00548 long intergenic non-protein coding RNA 548 3.12177
DLEU7-AS1 DLEU7 antisense RNA 1 3.12177
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) 3.12177
EDNRB endothelin receptor type B 3.12177
WDFY2 WD repeat and FYVE domain containing 2 3.12177
NEK5 NIMA-related kinase 5 3.12177
NEK3 NIMA-related kinase 3 3.12177
FBXL3 F-box and leucine-rich repeat protein 3 3.12177
MIR621 microRNA 621 3.12177
BTF3P11 basic transcription factor 3 pseudogene 11 3.12177
RNASEH2B-AS1 RNASEH2B antisense RNA 1 3.12177
EXOSC8 exosome component 8 3.12177
CCDC122 coiled-coil domain containing 122 3.12177
THSD1 thrombospondin, type I, domain containing 1 3.12177
INTS6 integrator complex subunit 6 3.12177
LINC00551 long intergenic non-protein coding RNA 551 3.12177
MYCBP2-AS1 MYCBP2 antisense RNA 1 3.12177
FAM124A family with sequence similarity 124A 3.12177
ARGLU1 arginine and glutamate rich 1 3.12177
STOML3 stomatin (EPB72)-like 3 3.12177
CLN5 ceroid-lipofuscinosis, neuronal 5 3.12177
ALG11 ALG11, alpha-1,2-mannosyltransferase 3.12177
SMIM2-IT1 SMIM2 intronic transcript 1 3.12177
COG6 component of oligomeric golgi complex 6 3.12177
SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 3.12177
MIR4305 microRNA 4305 3.12177
HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 3.12177
TPTE2P3 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3 3.12177
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 3.12177
GUCY1B2 guanylate cyclase 1, soluble, beta 2 (pseudogene) 3.12177
LINC00443 long intergenic non-protein coding RNA 443 3.12177
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase 3.12177
TRPC4 transient receptor potential cation channel, subfamily C, member 4 3.12177
LINC00332 long intergenic non-protein coding RNA 332 3.12177
MIR5693 microRNA 5693 3.12177
LHFP lipoma HMGIC fusion partner 3.12177
CCDC70 coiled-coil domain containing 70 3.12177
FREM2 FRAS1 related extracellular matrix protein 2 3.12177
DLEU7 deleted in lymphocytic leukemia, 7 3.12177
DHRS12 dehydrogenase/reductase (SDR family) member 12 3.12177
MRPS31P5 mitochondrial ribosomal protein S31 pseudogene 5 3.12177
POU4F1 POU class 4 homeobox 1 3.12177
KCTD12 potassium channel tetramerization domain containing 12 3.12177
LINC00371 long intergenic non-protein coding RNA 371 3.12177
RNASEH2B ribonuclease H2, subunit B 3.12177
LACC1 laccase (multicopper oxidoreductase) domain containing 1 3.12177
SCEL sciellin 3.12177
MIR4703 microRNA 4703 3.12177
ATP7B ATPase, Cu++ transporting, beta polypeptide 3.12177
POSTN periostin, osteoblast specific factor 3.12177
TSC22D1 TSC22 domain family, member 1 3.12177
NBEA neurobeachin 3.12177
MIR3665 microRNA 3665 3.12177
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 3.12177
FOXO1 forkhead box O1 2.93899
LINC00598 long intergenic non-protein coding RNA 598 2.93899
ELF1 E74-like factor 1 (ets domain transcription factor) 2.93899
DGKH diacylglycerol kinase, eta 2.93899
SLC46A3 solute carrier family 46, member 3 2.93899
UBL3 ubiquitin-like 3 2.93899
LINC00347 long intergenic non-protein coding RNA 347 2.93899
MIR5006 microRNA 5006 2.93899
OR7E37P olfactory receptor, family 7, subfamily E, member 37 pseudogene 2.93899
LINC00331 long intergenic non-protein coding RNA 331 2.93899
EPSTI1 epithelial stromal interaction 1 (breast) 2.93899
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 2.93899
ENOX1 ecto-NOX disulfide-thiol exchanger 1 2.93899
MTUS2 microtubule associated tumor suppressor candidate 2 2.93899
KBTBD6 kelch repeat and BTB (POZ) domain containing 6 2.93899
RGCC regulator of cell cycle 2.93899
VWA8 von Willebrand factor A domain containing 8 2.93899
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 2.93899
KBTBD7 kelch repeat and BTB (POZ) domain containing 7 2.93899
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit 2.93899
FAM216B family with sequence similarity 216, member B 2.93899
LINC00381 long intergenic non-protein coding RNA 381 2.93899
TPTE2P5 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 2.93899
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 2.93899
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11 2.93899
SUGT1P3 SUGT1 pseudogene 3 2.93899
MTRF1 mitochondrial translational release factor 1 2.93899
WBP4 WW domain binding protein 4 2.93899
RNF219 ring finger protein 219 2.93899
MTUS2-AS1 MTUS2 antisense RNA 1 2.93899
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 2.76305
LINC00544 long intergenic non-protein coding RNA 544 2.76305
LMO7 LIM domain 7 2.76305
NALCN-AS1 NALCN antisense RNA 1 2.76305
PARP4 poly (ADP-ribose) polymerase family, member 4 2.76305
CDK8 cyclin-dependent kinase 8 2.76305
MIR2681 microRNA 2681 2.76305
MTMR6 myotubularin related protein 6 2.76305
RXFP2 relaxin/insulin-like family peptide receptor 2 2.76305
RFC3 replication factor C (activator 1) 3, 38kDa 2.76305
HMGB1 high mobility group box 1 2.76305
PAN3-AS1 PAN3 antisense RNA 1 2.76305
SNORD37 small nucleolar RNA, C/D box 37 2.76305
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2 2.76305
BIVM basic, immunoglobulin-like variable motif containing 2.76305
KATNAL1 katanin p60 subunit A-like 1 2.76305
LNX2 ligand of numb-protein X 2 2.76305
RNF6 ring finger protein (C3H2C3 type) 6 2.76305
TEX26-AS1 TEX26 antisense RNA 1 2.76305
MIR548AS microRNA 548as 2.76305
HSPH1 heat shock 105kDa/110kDa protein 1 2.76305
B3GALTL beta 1,3-galactosyltransferase-like 2.76305
SHISA2 shisa family member 2 2.76305
CENPJ centromere protein J 2.76305
GSX1 GS homeobox 1 2.76305
NDFIP2-AS1 NDFIP2 antisense RNA 1 2.76305
DAOA-AS1 DAOA antisense RNA 1 2.76305
BORA bora, aurora kinase A activator 2.76305
MZT1 mitotic spindle organizing protein 1 2.76305
RNF17 ring finger protein 17 2.76305
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 2.76305
FLT3 fms-related tyrosine kinase 3 2.76305
POLR1D polymerase (RNA) I polypeptide D, 16kDa 2.76305
MEDAG mesenteric estrogen-dependent adipogenesis 2.76305
METTL21C methyltransferase like 21C 2.76305
POMP proteasome maturation protein 2.76305
LINC00297 long intergenic non-protein coding RNA 297 2.76305
COMMD6 COMM domain containing 6 2.76305
METTL21EP methyltransferase like 21E, pseudogene 2.76305
USP12 ubiquitin specific peptidase 12 2.76305
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 2.76305
PABPC3 poly(A) binding protein, cytoplasmic 3 2.76305
TPTE2P6 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6 2.76305
MIR4705 microRNA 4705 2.76305
NUPL1 nucleoporin like 1 2.76305
RBM26-AS1 RBM26 antisense RNA 1 2.76305
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 2.76305
ABHD13 abhydrolase domain containing 13 2.76305
RASL11A RAS-like, family 11, member A 2.76305
GPR12 G protein-coupled receptor 12 2.76305
MTIF3 mitochondrial translational initiation factor 3 2.76305
LINC00398 long intergenic non-protein coding RNA 398 2.76305
TPP2 tripeptidyl peptidase II 2.76305
ZAR1L zygote arrest 1-like 2.76305
LINC00426 long intergenic non-protein coding RNA 426 2.76305
MIR2276 microRNA 2276 2.76305
ERCC5 excision repair cross-complementation group 5 2.76305
RPL21 ribosomal protein L21 2.76305
FRY furry homolog (Drosophila) 2.76305
RBM26 RNA binding motif protein 26 2.76305
LINC00343 long intergenic non-protein coding RNA 343 2.76305
DAOA D-amino acid oxidase activator 2.76305
AMER2 APC membrane recruitment protein 2 2.76305
SPATA13 spermatogenesis associated 13 2.76305
BIVM-ERCC5 BIVM-ERCC5 readthrough 2.76305
C1QTNF9 C1q and tumor necrosis factor related protein 9 2.76305
TEX26 testis expressed 26 2.76305
GTF3A general transcription factor IIIA 2.76305
SNORD102 small nucleolar RNA, C/D box 102 2.76305
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 2.76305
NDFIP2 Nedd4 family interacting protein 2 2.76305
LIG4 ligase IV, DNA, ATP-dependent 2.76305
SPATA13-AS1 SPATA13 antisense RNA 1 2.76305
ALOX5AP arachidonate 5-lipoxygenase-activating protein 2.76305
CCDC168 coiled-coil domain containing 168 2.64759
CDX2 caudal type homeobox 2 2.64759
CTAGE11P CTAGE family, member 11, pseudogene 2.64759
MINOS1P1 mitochondrial inner membrane organizing system 1 pseudogene 1 2.64759
BRCA2 breast cancer 2, early onset 2.64759
SNORA27 small nucleolar RNA, H/ACA box 27 2.64759
N4BP2L2 NEDD4 binding protein 2-like 2 2.64759
N4BP2L2-IT2 N4BPL2 intronic transcript 2 2.64759
N4BP2L1 NEDD4 binding protein 2-like 1 2.64759
PDX1 pancreatic and duodenal homeobox 1 2.64759
KLF12 Kruppel-like factor 12 2.64759
TBC1D4 TBC1 domain family, member 4 2.64759
ATP5EP2 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2 2.64759
ATP8A2 ATPase, aminophospholipid transporter, class I, type 8A, member 2 2.64759
KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1 2.64759
TEX30 testis expressed 30 2.64759
KLF5 Kruppel-like factor 5 (intestinal) 2.59653
MYO16 myosin XVI 2.59653
KL klotho 2.59653
LINC00423 long intergenic non-protein coding RNA 423 2.59653
STARD13-AS STARD13 antisense RNA 2.59653
STARD13 StAR-related lipid transfer (START) domain containing 13 2.59653
PIBF1 progesterone immunomodulatory binding factor 1 2.59653
PDS5B PDS5 cohesin associated factor B 2.59653
MIR4306 microRNA 4306 2.59653
FKSG29 FKSG29 2.59653
MYO16-AS1 MYO16 antisense RNA 1 2.59653
MIR623 microRNA 623 2.59653
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 2.49065
SOX21 SRY (sex determining region Y)-box 21 2.49065
E2F1 E2F transcription factor 1 2.49065
CLDN10 claudin 10 2.49065
ACTL10 actin-like 10 2.49065
C20ORF144 chromosome 20 open reading frame 144 2.49065
CHMP4B charged multivesicular body protein 4B 2.49065
NECAB3 N-terminal EF-hand calcium binding protein 3 2.49065
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 2.49065
DZIP1 DAZ interacting zinc finger protein 1 2.49065
TM9SF2 transmembrane 9 superfamily member 2 2.49065
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 2.49065
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 2.44392
ZNF341 zinc finger protein 341 2.44392
PXMP4 peroxisomal membrane protein 4, 24kDa 2.44392
RALY RALY heterogeneous nuclear ribonucleoprotein 2.41451
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 2.41451
MIR4755 microRNA 4755 2.41451
GPC5-AS1 GPC5 antisense RNA 1 2.41451
ASIP agouti signaling protein 2.41451
IRS2 insulin receptor substrate 2 2.41451
G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2.39327
LINC00410 long intergenic non-protein coding RNA 410 2.36889
AHCY adenosylhomocysteinase 2.36889
COCH cochlin 2.36889
SCFD1 sec1 family domain containing 1 2.36889
LOC100506071 uncharacterized LOC100506071 2.36889
LINC01551 long intergenic non-protein coding RNA 1551 2.35236
FOXG1 forkhead box G1 2.35236
PRKD1 protein kinase D1 2.35236
MIR548AI microRNA 548ai 2.3178
STRN3 striatin, calmodulin binding protein 3 2.3178
LINC00379 long intergenic non-protein coding RNA 379 2.30944
ITCH itchy E3 ubiquitin protein ligase 2.30944
AKAP6 A kinase (PRKA) anchor protein 6 2.283
MIR17HG miR-17-92 cluster host gene 2.283
GPR33 G protein-coupled receptor 33 (gene/pseudogene) 2.283
MIR19B1 microRNA 19b-1 2.283
DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2.283
HEATR5A HEAT repeat containing 5A 2.283
ARHGAP5 Rho GTPase activating protein 5 2.26395
NUBPL nucleotide binding protein-like 2.26395
GPC5 glypican 5 2.26395
ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head) 2.26395
SNORA31 small nucleolar RNA, H/ACA box 31 2.16564
RB1 retinoblastoma 1 2.15834
LPAR6 lysophosphatidic acid receptor 6 2.15825
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 2.15807
LINC00441 long intergenic non-protein coding RNA 441 2.15726
CYSLTR2 cysteinyl leukotriene receptor 2 2.15648
MIR5007 microRNA 5007 2.15648
LINC00462 long intergenic non-protein coding RNA 462 2.15593
LINC00558 long intergenic non-protein coding RNA 558 2.15529
FNDC3A fibronectin type III domain containing 3A 2.15529
MIR1297 microRNA 1297 2.15529
CDADC1 cytidine and dCMP deaminase domain containing 1 2.15529
CAB39L calcium binding protein 39-like 2.15529
PHF11 PHD finger protein 11 2.15465
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 2.15465
SETDB2 SET domain, bifurcated 2 2.15465
MLNR motilin receptor 2.15465
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 2.15402
ITM2B integral membrane protein 2B 2.15402
CCNA1 cyclin A1 2.15316
SERTM1 serine-rich and transmembrane domain containing 1 2.15316
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 2.15316
ESD esterase D 2.15316
SPG20-AS1 SPG20 antisense RNA 1 2.15316
LINC00348 long intergenic non-protein coding RNA 348 2.15316
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa 2.15316
KCTD4 potassium channel tetramerization domain containing 4 2.15316
GJA3 gap junction protein, alpha 3, 46kDa 2.14626
PRR20D proline rich 20D 2.14626
PRR20B proline rich 20B 2.14626
DLEU1 deleted in lymphocytic leukemia 1 (non-protein coding) 2.14626
PRR20E proline rich 20E 2.14626
DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding) 2.14508
GJB6 gap junction protein, beta 6, 30kDa 2.14508
ARL11 ADP-ribosylation factor-like 11 2.14508
EBPL emopamil binding protein-like 2.14508
CRYL1 crystallin, lambda 1 2.14508
KPNA3 karyopherin alpha 3 (importin alpha 4) 2.14508
GJB2 gap junction protein, beta 2, 26kDa 2.14508
MIR16-1 microRNA 16-1 2.14311
CTAGE10P CTAGE family, member 10, pseudogene 2.14311
MIR3613 microRNA 3613 2.14311
SPRYD7 SPRY domain containing 7 2.14311
KCNRG potassium channel regulator 2.14311
TDRD3 tudor domain containing 3 2.14311
TRIM13 tripartite motif containing 13 2.14311
OLFM4 olfactomedin 4 2.14311
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3 2.14135
RFXAP regulatory factor X-associated protein 2.14116
MIR4499 microRNA 4499 2.14116
PCDH9-AS3 PCDH9 antisense RNA 3 2.14116
LINC00547 long intergenic non-protein coding RNA 547 2.14116
MIR759 microRNA 759 2.14116
CCDC169-SOHLH2 CCDC169-SOHLH2 readthrough 2.14116
LECT1 leukocyte cell derived chemotaxin 1 2.14116
DIAPH3-AS2 DIAPH3 antisense RNA 2 2.14116
RNF219-AS1 RNF219 antisense RNA 1 2.14116
LINC00446 long intergenic non-protein coding RNA 446 2.14116
CCDC169 coiled-coil domain containing 169 2.14116
CSNK1A1L casein kinase 1, alpha 1-like 2.14116
LINC00571 long intergenic non-protein coding RNA 571 2.14116
ATXN8OS ATXN8 opposite strand (non-protein coding) 2.14116
SPG20 spastic paraplegia 20 (Troyer syndrome) 2.14116
PCDH8 protocadherin 8 2.14116
PCDH20 protocadherin 20 2.14116
DIAPH3 diaphanous-related formin 3 2.14116
KLHL1 kelch-like family member 1 2.14116
DACH1 dachshund family transcription factor 1 2.14116
MIR3169 microRNA 3169 2.14116
DIAPH3-AS1 DIAPH3 antisense RNA 1 2.14116
PCDH9-AS2 PCDH9 antisense RNA 2 2.14116
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) 2.14116
SMAD9 SMAD family member 9 2.14116
ST13P4 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 4 2.14116
PSPC1 paraspeckle component 1 2.13646
ZMYM2 zinc finger, MYM-type 2 2.13646
ZMYM5 zinc finger, MYM-type 5 2.13622
MPHOSPH8 M-phase phosphoprotein 8 2.13622
LATS2 large tumor suppressor kinase 2 2.1339
LINC00333 long intergenic non-protein coding RNA 333 2.1316
SLITRK1 SLIT and NTRK-like family, member 1 2.1316
IFT88 intraflagellar transport 88 2.1316
PCDH17 protocadherin 17 2.12931
SLITRK6 SLIT and NTRK-like family, member 6 2.12931
N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative) 2.12931
LINC00424 long intergenic non-protein coding RNA 424 2.12931
IL17D interleukin 17D 2.12931
XPO4 exportin 4 2.12931
FGF9 fibroblast growth factor 9 2.12931
BASP1P1 brain abundant, membrane attached signal protein 1 pseudogene 1 2.12703
LINC00550 long intergenic non-protein coding RNA 550 2.12703
SACS-AS1 SACS antisense RNA 1 2.12703
LINC00327 long intergenic non-protein coding RNA 327 2.12703
ZDHHC20 zinc finger, DHHC-type containing 20 2.12703
AKAP11 A kinase (PRKA) anchor protein 11 2.12703
SACS sacsin molecular chaperone 2.12703
SKA3 spindle and kinetochore associated complex subunit 3 2.12703
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 2.12703
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 2.12703
SNORD31 small nucleolar RNA, C/D box 31 2.12703
MIPEPP3 mitochondrial intermediate peptidase pseudogene 3 2.12703
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) 2.12703
MICU2 mitochondrial calcium uptake 2 2.12703
SAP18 Sin3A-associated protein, 18kDa 2.12703
LINC00421 long intergenic non-protein coding RNA 421 2.12527
OR7E156P olfactory receptor, family 7, subfamily E, member 156 pseudogene 2.12439
LINC00351 long intergenic non-protein coding RNA 351 2.12439
GGACT gamma-glutamylamine cyclotransferase 2.12439
LOC647264 keratin-associated protein 6-2 2.12439
PCDH9 protocadherin 9 2.12439
FGF14-IT1 FGF14 intronic transcript 1 2.12225
LINC00433 long intergenic non-protein coding RNA 433 2.12225
PAN3 PAN3 poly(A) specific ribonuclease subunit 2.12225
C1QTNF9B C1q and tumor necrosis factor related protein 9B 2.12225
MIPEP mitochondrial intermediate peptidase 2.12225
WASF3 WAS protein family, member 3 2.12225
MBNL2 muscleblind-like splicing regulator 2 2.12225
USPL1 ubiquitin specific peptidase like 1 2.12225
FGF14-AS2 FGF14 antisense RNA 2 2.12225
RAP2A RAP2A, member of RAS oncogene family 2.12225
FLT1 fms-related tyrosine kinase 1 2.12225
C1QTNF9B-AS1 C1QTNF9B antisense RNA 1 2.12225
ANKRD20A19P ankyrin repeat domain 20 family, member A19, pseudogene 2.12225
NALCN sodium leak channel, non selective 2.12225
PCCA-AS1 PCCA antisense RNA 1 2.12225
TMTC4 transmembrane and tetratricopeptide repeat containing 4 2.12225
ANKRD26P3 ankyrin repeat domain 26 pseudogene 3 2.11467
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 2.11435
PCCA propionyl CoA carboxylase, alpha polypeptide 2.11344
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 2.11344
RNF113B ring finger protein 113B 2.11344
STK24 serine/threonine kinase 24 2.11167
IPO5 importin 5 2.11167
MIR3170 microRNA 3170 2.11167
FGF14 fibroblast growth factor 14 2.10992
MIR4500HG MIR4500 host gene 2.10992
ZIC2 Zic family member 2 2.10992
LINC00353 long intergenic non-protein coding RNA 353 2.10992
LINC00359 long intergenic non-protein coding RNA 359 2.10992
SLITRK5 SLIT and NTRK-like family, member 5 2.10992
ZIC5 Zic family member 5 2.10992
MIR4500 microRNA 4500 2.10992
OXGR1 oxoglutarate (alpha-ketoglutarate) receptor 1 2.10992
RNU6-52P RNA, U6 small nuclear 52, pseudogene 2.10548
LINC00442 long intergenic non-protein coding RNA 442 2.10548
DOCK9 dedicator of cytokinesis 9 2.10317
COL4A1 collagen, type IV, alpha 1 2.10038
SLC15A1 solute carrier family 15 (oligopeptide transporter), member 1 2.10038
MIR548AN microRNA 548an 2.10038
UBAC2-AS1 UBAC2 antisense RNA 1 2.10038
CLYBL citrate lyase beta like 2.10038
FAM155A family with sequence similarity 155, member A 2.10038
GPR183 G protein-coupled receptor 183 2.10038
GPR18 G protein-coupled receptor 18 2.10038
UBAC2 UBA domain containing 2 2.10038
TUBA3C tubulin, alpha 3c 2.09826
SPRY2 sprouty homolog 2 (Drosophila) 2.09431
HS6ST3 heparan sulfate 6-O-sulfotransferase 3 2.09431
GPC6-AS2 GPC6 antisense RNA 2 2.09431
CLDN10-AS1 CLDN10 antisense RNA 1 2.09431
TGDS TDP-glucose 4,6-dehydratase 2.09073
GPR180 G protein-coupled receptor 180 2.09073
DCT dopachrome tautomerase 2.09073
LINC00559 long intergenic non-protein coding RNA 559 2.08712
MIR622 microRNA 622 2.08334
GPC6 glypican 6 2.07851
SNORA9 small nucleolar RNA, H/ACA box 9 2.07851
SNORD112 small nucleolar RNA, C/D box 112 2.04693

low copy number

Symbol Name Standardized Value
FCGR1C Fc fragment of IgG, high affinity Ic, receptor (CD64), pseudogene -3.17926
LOC388692 uncharacterized LOC388692 -3.04886
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 -2.84635
CCSER1 coiled-coil serine-rich protein 1 -2.82606
MACROD2 MACRO domain containing 2 -2.81481
MACROD2-AS1 MACROD2 antisense RNA 1 -2.81384
OR2T11 olfactory receptor, family 2, subfamily T, member 11 (gene/pseudogene) -2.78432
OR2T10 olfactory receptor, family 2, subfamily T, member 10 -2.78237