NCI-H441 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Similar Terms
Downloads & Tools

Genes

307 genes with high or low copy number in NCI-H441 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
GPX3 glutathione peroxidase 3 4.51153
CCDC69 coiled-coil domain containing 69 4.51153
ZNF300P1 zinc finger protein 300 pseudogene 1 (functional) 4.51153
TNIP1 TNFAIP3 interacting protein 1 4.51153
ANXA6 annexin A6 4.51153
CD109 CD109 molecule 3.12177
CEP68 centrosomal protein 68kDa 2.93899
FLJ16124 2.93899
LOC339807 uncharacterized LOC339807 2.93899
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 2.93899
SERTAD2 SERTA domain containing 2 2.93899
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 2.93899
IFT20 intraflagellar transport 20 2.93899
PPY2P pancreatic polypeptide 2, pseudogene 2.93899
RAB1A RAB1A, member RAS oncogene family 2.93899
SPRED2 sprouty-related, EVH1 domain containing 2 2.93899
TMEM97 transmembrane protein 97 2.93899
TBK1 TANK-binding kinase 1 2.93899
KRT18P55 keratin 18 pseudogene 55 2.93899
LOC400958 uncharacterized LOC400958 2.93899
SEBOX SEBOX homeobox 2.76305
MIR548Z microRNA 548z 2.76305
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 2.76305
MIR4723 microRNA 4723 2.76305
GNS glucosamine (N-acetyl)-6-sulfatase 2.76305
NLK nemo-like kinase 2.76305
PRELID2 PRELI domain containing 2 2.76305
SLC46A1 solute carrier family 46 (folate transporter), member 1 2.76305
TMEM199 transmembrane protein 199 2.76305
MIR548C microRNA 548c 2.76305
PYY2 peptide YY, 2 (pseudogene) 2.76305
RASSF3 Ras association (RalGDS/AF-6) domain family member 3 2.76305
POLDIP2 polymerase (DNA-directed), delta interacting protein 2 2.76305
GRXCR2 glutaredoxin, cysteine rich 2 2.76305
SARM1 sterile alpha and TIR motif containing 1 2.76305
VTN vitronectin 2.76305
LARS leucyl-tRNA synthetase 2.64759
NEK8 NIMA-related kinase 8 2.64759
RPL23A ribosomal protein L23a 2.64759
PROCA1 protein interacting with cyclin A1 2.64759
SLC13A2 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 2.64759
TLCD1 TLC domain containing 1 2.64759
TRAF4 TNF receptor-associated factor 4 2.64759
RAB34 RAB34, member RAS oncogene family 2.64759
LINC00662 long intergenic non-protein coding RNA 662 2.64759
SNORD42B small nucleolar RNA, C/D box 42B 2.64759
PLAC8L1 PLAC8-like 1 2.64759
SNORD4A small nucleolar RNA, C/D box 4A 2.64759
KIAA0100 KIAA0100 2.64759
PIPOX pipecolic acid oxidase 2.64759
SNORD42A small nucleolar RNA, C/D box 42A 2.64759
SNORD4B small nucleolar RNA, C/D box 4B 2.64759
TIAF1 TGFB1-induced anti-apoptotic factor 1 2.64759
NARR nine-amino acid residue-repeats 2.64759
SH3RF2 SH3 domain containing ring finger 2 2.64759
HYAL4 hyaluronoglucosaminidase 4 2.59653
SPAG5 sperm associated antigen 5 2.59653
SLC13A1 solute carrier family 13 (sodium/sulfate symporter), member 1 2.59653
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1 2.59653
MIR451B microRNA 451b 2.59653
SPAG5-AS1 SPAG5 antisense RNA 1 2.59653
TAS2R16 taste receptor, type 2, member 16 2.59653
SGK494 uncharacterized serine/threonine-protein kinase SgK494 2.59653
POT1 protection of telomeres 1 2.59653
SPTLC3 serine palmitoyltransferase, long chain base subunit 3 2.59653
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 2.59653
SDF2 stromal cell-derived factor 2 2.59653
FLOT2 flotillin 2 2.59653
FOXN1 forkhead box N1 2.59653
MIR4732 microRNA 4732 2.59653
LMOD2 leiomodin 2 (cardiac) 2.59653
PIGS phosphatidylinositol glycan anchor biosynthesis, class S 2.59653
MIR451A microRNA 451a 2.59653
MIR144 microRNA 144 2.59653
ALDOC aldolase C, fructose-bisphosphate 2.59653
TMEM229A transmembrane protein 229A 2.59653
HYALP1 hyaluronoglucosaminidase pseudogene 1 2.59653
WASL Wiskott-Aldrich syndrome-like 2.59653
LOC154872 2.59653
UNC119 unc-119 homolog (C. elegans) 2.59653
DHRS13 dehydrogenase/reductase (SDR family) member 13 2.59653
IQUB IQ motif and ubiquitin domain containing 2.59653
ASB15 ankyrin repeat and SOCS box containing 15 2.59653
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 2.59653
SEZ6 seizure related 6 homolog (mouse) 2.59653
FAM222B family with sequence similarity 222, member B 2.59653
ISM1-AS1 ISM1 antisense RNA 1 2.59653
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) 2.59653
ISM1 isthmin 1, angiogenesis inhibitor 2.59653
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans) 2.59653
LAMB1 laminin, beta 1 2.49065
GPR37 G protein-coupled receptor 37 (endothelin receptor type B-like) 2.49065
RNF148 ring finger protein 148 2.49065
PHF12 PHD finger protein 12 2.49065
LAMB4 laminin, beta 4 2.49065
NRCAM neuronal cell adhesion molecule 2.49065
PNPLA8 patatin-like phospholipase domain containing 8 2.49065
MYO18A myosin XVIIIA 2.49065
THAP5 THAP domain containing 5 2.49065
RNF133 ring finger protein 133 2.49065
DLD dihydrolipoamide dehydrogenase 2.49065
FEZF1-AS1 FEZF1 antisense RNA 1 2.49065
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 2.49065
FEZF1 FEZ family zinc finger 1 2.49065
TASP1 taspase, threonine aspartase, 1 2.49065
CADPS2 Ca++-dependent secretion activator 2 2.49065
COG5 component of oligomeric golgi complex 5 2.44392
MYO7A myosin VIIA 2.44392
SLC26A5 solute carrier family 26 (anion exchanger), member 5 2.44392
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 2.44392
GPR22 G protein-coupled receptor 22 2.44392
SLC26A4 solute carrier family 26 (anion exchanger), member 4 2.44392
WNT16 wingless-type MMTV integration site family, member 16 2.44392
BCAP29 B-cell receptor-associated protein 29 2.44392
SLC26A3 solute carrier family 26 (anion exchanger), member 3 2.44392
FAM3C family with sequence similarity 3, member C 2.44392
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 2.44392
PMPCB peptidase (mitochondrial processing) beta 2.44392
ORC5 origin recognition complex, subunit 5 2.44392
HBP1 HMG-box transcription factor 1 2.44392
DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 2.44392
DUS4L dihydrouridine synthase 4-like (S. cerevisiae) 2.44392
RELN reelin 2.44392
SLC26A4-AS1 SLC26A4 antisense RNA 1 2.44392
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase 2.44392
CCDC71L coiled-coil domain containing 71-like 2.41451
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 2.41451
C7ORF66 chromosome 7 open reading frame 66 2.41451
LHFPL3 lipoma HMGIC fusion partner-like 3 2.41451
PRKAR2B protein kinase, cAMP-dependent, regulatory, type II, beta 2.41451
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1 2.39327
GPR85 G protein-coupled receptor 85 2.39327
ING3 inhibitor of growth family, member 3 2.39327
TENM4 teneurin transmembrane protein 4 2.39327
TSPAN12 tetraspanin 12 2.39327
C7ORF60 chromosome 7 open reading frame 60 2.39327
TMEM168 transmembrane protein 168 2.39327
CPED1 cadherin-like and PC-esterase domain containing 1 2.39327
LSMEM1 leucine-rich single-pass membrane protein 1 2.39327
GDPD4 glycerophosphodiester phosphodiesterase domain containing 4 2.39327
ZNF277 zinc finger protein 277 2.36889
THRSP thyroid hormone responsive 2.36889
USP35 ubiquitin specific peptidase 35 2.36889
IFRD1 interferon-related developmental regulator 1 2.36889
NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 2.36889
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2.36889
KCTD21 potassium channel tetramerization domain containing 21 2.36889
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) 2.36889
ALG8 ALG8, alpha-1,3-glucosyltransferase 2.36889
KCTD14 potassium channel tetramerization domain containing 14 2.36889
NDUFC2-KCTD14 NDUFC2-KCTD14 readthrough 2.36889
CLNS1A chloride channel, nucleotide-sensitive, 1A 2.35236
AQP11 aquaporin 11 2.35236
RSF1 remodeling and spacing factor 1 2.35236
SEC23A Sec23 homolog A (S. cerevisiae) 2.35236
PNN pinin, desmosome associated protein 2.35236
TRAPPC6B trafficking protein particle complex 6B 2.35236
GAB2 GRB2-associated binding protein 2 2.35236
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2 2.35236
MIA2 melanoma inhibitory activity 2 2.35236
AAMDC adipogenesis associated, Mth938 domain containing 2.35236
GEMIN2 gem (nuclear organelle) associated protein 2 2.35236
LINC00639 long intergenic non-protein coding RNA 639 2.3178
CLEC14A C-type lectin domain family 14, member A 2.30944
SSTR1 somatostatin receptor 1 2.30944
NAA38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit 2.283
ANKRD7 ankyrin repeat domain 7 2.283
SHFM1 split hand/foot malformation (ectrodactyly) type 1 2.283
MIR4503 microRNA 4503 2.283
FOXA1 forkhead box A1 2.283
C7ORF76 chromosome 7 open reading frame 76 2.283
LOC100506136 uncharacterized LOC100506136 2.283
TAC1 tachykinin, precursor 1 2.26395
PON1 paraoxonase 1 2.26395
SGCE sarcoglycan, epsilon 2.26395
PON2 paraoxonase 2 2.26395
SDHAF3 succinate dehydrogenase complex assembly factor 3 2.26395
CASD1 CAS1 domain containing 1 2.26395
PON3 paraoxonase 3 2.26395
PDK4 pyruvate dehydrogenase kinase, isozyme 4 2.26395
DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1 2.26395
ASB4 ankyrin repeat and SOCS box containing 4 2.26395
TFEC transcription factor EC 2.26395
TTC6 tetratricopeptide repeat domain 6 2.26395
DLX6-AS1 DLX6 antisense RNA 1 2.26395
DLX5 distal-less homeobox 5 2.26395
DLX6 distal-less homeobox 6 2.26395
TES testin LIM domain protein 2.26395
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13 2.26395
COL1A2 collagen, type I, alpha 2 2.26395
PEG10 paternally expressed 10 2.26395
ASZ1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 2.25904
SLC25A21-AS1 SLC25A21 antisense RNA 1 2.25904
WNT2 wingless-type MMTV integration site family member 2 2.25904
ST7-OT3 ST7 overlapping transcript 3 2.25904
NKX2-1 NK2 homeobox 1 2.25904
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 2.25904
PAX9 paired box 9 2.25904
CAV2 caveolin 2 2.25904
NKX2-8 NK2 homeobox 8 2.25904
CTTNBP2 cortactin binding protein 2 2.25904
MIPOL1 mirror-image polydactyly 1 2.25904
CAV1 caveolin 1, caveolae protein, 22kDa 2.24845
ST7-AS2 ST7 antisense RNA 2 2.24845
MBIP MAP3K12 binding inhibitory protein 1 2.24845
PPP1R9A protein phosphatase 1, regulatory subunit 9A 2.24845
SFTA3 surfactant associated 3 2.24845
ST7 suppression of tumorigenicity 7 2.24139
ST7-OT4 ST7 overlapping transcript 4 2.24139
ST7-AS1 ST7 antisense RNA 1 2.24139
SLC25A21 solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 2.2355
MET MET proto-oncogene, receptor tyrosine kinase 2.2355
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 2.2355
DPPA3 developmental pluripotency associated 3 2.22917
SNORA25 small nucleolar RNA, H/ACA box 25 2.15953
TTC38 tetratricopeptide repeat domain 38 2.14311
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1 2.14311
CDPF1 cysteine-rich, DPF motif domain containing 1 2.14311
PKDREJ polycystin (PKD) family receptor for egg jelly 2.14311
ANKRD30BP2 ankyrin repeat domain 30B pseudogene 2 2.14116
GTSE1 G-2 and S-phase expressed 1 2.14116
TRMU tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase 2.14116
GTSE1-AS1 GTSE1 antisense RNA 1 (head to head) 2.14116
PPARA peroxisome proliferator-activated receptor alpha 2.12931
CHODL chondrolectin 2.12564
TMPRSS15 transmembrane protease, serine 15 2.12564
TRIM64C tripartite motif containing 64C 2.12225
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1 2.12225
TRIM49B tripartite motif containing 49B 2.12225
OR4C12 olfactory receptor, family 4, subfamily C, member 12 2.10992
OR4C13 olfactory receptor, family 4, subfamily C, member 13 2.10992
LOC440040 glutamate receptor, metabotropic 5 pseudogene 2.10992
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35 2.10317
OR2A14 olfactory receptor, family 2, subfamily A, member 14 2.10038
TPK1 thiamin pyrophosphokinase 1 2.10038
OR2A25 olfactory receptor, family 2, subfamily A, member 25 2.10038
OR2F1 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene) 2.10038
OR2A2 olfactory receptor, family 2, subfamily A, member 2 2.10038
NOBOX NOBOX oogenesis homeobox 2.10038
OR6B1 olfactory receptor, family 6, subfamily B, member 1 2.10038
FAM181B family with sequence similarity 181, member B 2.10038
OR2A5 olfactory receptor, family 2, subfamily A, member 5 2.10038
GRM8 glutamate receptor, metabotropic 8 2.10038
OR2F2 olfactory receptor, family 2, subfamily F, member 2 2.10038
OR2A12 olfactory receptor, family 2, subfamily A, member 12 2.10038
RNU6-57P RNA, U6 small nuclear 57, pseudogene 2.09888
OR2A9P olfactory receptor, family 2, subfamily A, member 9 pseudogene 2.09826
ARHGEF34P Rho guanine nucleotide exchange factor (GEF) 34, pseudogene 2.09826
CTAGE4 CTAGE family, member 4 2.09826
OR2A1 olfactory receptor, family 2, subfamily A, member 1 2.09826
OR2A7 olfactory receptor, family 2, subfamily A, member 7 2.09826
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5 2.09727
MIR548F4 microRNA 548f-4 2.09529
PRCP prolylcarboxypeptidase (angiotensinase C) 2.09431
CNTNAP2 contactin associated protein-like 2 2.09431
ANKRD42 ankyrin repeat domain 42 2.09431
PCF11 PCF11 cleavage and polyadenylation factor subunit 2.09431
CCDC90B coiled-coil domain containing 90B 2.09431
AASS aminoadipate-semialdehyde synthase 2.09431
LRRN3 leucine rich repeat neuronal 3 2.09294
MIR548AQ microRNA 548aq 2.09161
DLG2 discs, large homolog 2 (Drosophila) 2.09161
TCAF1 TRPM8 channel-associated factor 1 2.09117
MIR4300 microRNA 4300 2.09073
RAB30 RAB30, member RAS oncogene family 2.09073
SNORA70E small nucleolar RNA, H/ACA box 70E 2.09073
MIR548I4 microRNA 548i-4 2.09073
MIR548AR microRNA 548ar 2.08423
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 2.08423
MIR5579 microRNA 5579 2.08334
MIR708 microRNA 708 2.08334
DOCK4 dedicator of cytokinesis 4 2.08021
CTAGE5 CTAGE family, member 5 2.07822
FBXO33 F-box protein 33 2.07822
LOC100288846 uncharacterized LOC100288846 2.07776
OR4M1 olfactory receptor, family 4, subfamily M, member 1 2.06989
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3 2.06989
MIR591 microRNA 591 2.06626
OR4K2 olfactory receptor, family 4, subfamily K, member 2 2.06626
OR4K5 olfactory receptor, family 4, subfamily K, member 5 2.06626
OR4N2 olfactory receptor, family 4, subfamily N, member 2 2.06626
OR4K1 olfactory receptor, family 4, subfamily K, member 1 2.06626
INTS4 integrator complex subunit 4 2.06537
MIR920 microRNA 920 2.05673
LINC00477 long intergenic non-protein coding RNA 477 2.05441
SOX5 SRY (sex determining region Y)-box 5 2.05408
BCAT1 branched chain amino-acid transaminase 1, cytosolic 2.05311
C12ORF77 chromosome 12 open reading frame 77 2.05311
LRMP lymphoid-restricted membrane protein 2.05242
LYRM5 LYR motif containing 5 2.0521
CASC1 cancer susceptibility candidate 1 2.0521
KRAS Kirsten rat sarcoma viral oncogene homolog 2.05093
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 2.05045

low copy number

Symbol Name Standardized Value
RACGAP1P Rac GTPase activating protein 1 pseudogene -3.17697
PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like -3.17182
IRAK4 interleukin-1 receptor-associated kinase 4 -3.17182
PLEKHA8P1 pleckstrin homology domain containing, family A member 8 pseudogene 1 -3.17182
TWF1 twinfilin actin binding protein 1 -3.17182
RNY5 RNA, Ro-associated Y5 -3.17182
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 -3.16503
NELL2 NEL-like 2 (chicken) -3.08859
TMEM117 transmembrane protein 117 -3.08758
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -3.08574
LINC00938 long intergenic non-protein coding RNA 938 -3.08574
DBX2 developing brain homeobox 2 -3.08574
SCAF11 SR-related CTD-associated factor 11 -3.08574
ANO6 anoctamin 6 -3.08574