NCI-H28 Gene Set

Dataset Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles
Category genomics
Type cell line
Description disease: mesothelioma (pleura primary) (Cell Line Ontology, CLO_0008079)
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Genes

103 genes mutated in the NCI-H28 cell line from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.

Symbol Name
ABCA7 ATP-binding cassette, sub-family A (ABC1), member 7
ACLY ATP citrate lyase
ANKZF1 ankyrin repeat and zinc finger domain containing 1
ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
ARHGAP32 Rho GTPase activating protein 32
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like
ARMC9 armadillo repeat containing 9
ATP5D ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
ATXN2 ataxin 2
ATXN2L ataxin 2-like
BOK BCL2-related ovarian killer
BRCA2 breast cancer 2, early onset
CARF calcium responsive transcription factor
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family)
CCDC96 coiled-coil domain containing 96
CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta
CEP295 centrosomal protein 295kDa
CHIC2 cysteine-rich hydrophobic domain 2
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant
CNTN6 contactin 6
CPT1A carnitine palmitoyltransferase 1A (liver)
DBNDD2 dysbindin (dystrobrevin binding protein 1) domain containing 2
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1
EEFSEC eukaryotic elongation factor, selenocysteine-tRNA-specific
ERO1L ERO1-like (S. cerevisiae)
FBXO4 F-box protein 4
FMNL1 formin-like 1
GNB1L guanine nucleotide binding protein (G protein), beta polypeptide 1-like
GOLGB1 golgin B1
GSN gelsolin
GTPBP4 GTP binding protein 4
HDDC3 HD domain containing 3
HELZ2 helicase with zinc finger 2, transcriptional coactivator
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
HKDC1 hexokinase domain containing 1
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
INO80E INO80 complex subunit E
IPO4 importin 4
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
JADE1 jade family PHD finger 1
JARID2 jumonji, AT rich interactive domain 2
KCTD3 potassium channel tetramerization domain containing 3
KDM2B lysine (K)-specific demethylase 2B
KLC4 kinesin light chain 4
KMT2E lysine (K)-specific methyltransferase 2E
LAMA5 laminin, alpha 5
LEMD2 LEM domain containing 2
LIPA lipase A, lysosomal acid, cholesterol esterase
MAN2C1 mannosidase, alpha, class 2C, member 1
MPND MPN domain containing
MVD mevalonate (diphospho) decarboxylase
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NCDN neurochondrin
NFE2L1 nuclear factor, erythroid 2-like 1
NTN4 netrin 4
NUDT15 nudix (nucleoside diphosphate linked moiety X)-type motif 15
NUP88 nucleoporin 88kDa
PARD3 par-3 family cell polarity regulator
PCM1 pericentriolar material 1
PGM2L1 phosphoglucomutase 2-like 1
PI4KA phosphatidylinositol 4-kinase, catalytic, alpha
PODXL podocalyxin-like
PPM1A protein phosphatase, Mg2+/Mn2+ dependent, 1A
PPP1R3D protein phosphatase 1, regulatory subunit 3D
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
RHBDD3 rhomboid domain containing 3
RING1 ring finger protein 1
RPAP3 RNA polymerase II associated protein 3
RPN1 ribophorin I
SAMD1 sterile alpha motif domain containing 1
SAP130 Sin3A-associated protein, 130kDa
SCAMP3 secretory carrier membrane protein 3
SELO selenoprotein O
SIN3B SIN3 transcription regulator family member B
SLC35B1 solute carrier family 35, member B1
SLC35E4 solute carrier family 35, member E4
SLC4A11 solute carrier family 4, sodium borate transporter, member 11
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SNX13 sorting nexin 13
SPATA20 spermatogenesis associated 20
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1
SRSF7 serine/arginine-rich splicing factor 7
SYNE1 spectrin repeat containing, nuclear envelope 1
TBCCD1 TBCC domain containing 1
TCFL5 transcription factor-like 5 (basic helix-loop-helix)
TCOF1 Treacher Collins-Franceschetti syndrome 1
TIAM2 T-cell lymphoma invasion and metastasis 2
TIMM17B translocase of inner mitochondrial membrane 17 homolog B (yeast)
TIMM8A translocase of inner mitochondrial membrane 8 homolog A (yeast)
TMEM194B transmembrane protein 194B
TMF1 TATA element modulatory factor 1
TRIP4 thyroid hormone receptor interactor 4
TUBGCP2 tubulin, gamma complex associated protein 2
UNC119B unc-119 homolog B (C. elegans)
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
WAPAL wings apart-like homolog (Drosophila)
WDR59 WD repeat domain 59
XPO5 exportin 5
YTHDC2 YTH domain containing 2
ZNF317 zinc finger protein 317
ZNF507 zinc finger protein 507
ZNF526 zinc finger protein 526