NCI-H2172 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: non-small cell lung cancer (Cell Line Ontology, CLO_0008061)
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Genes

70 genes with high or low copy number in NCI-H2172 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
ADGRF4 adhesion G protein-coupled receptor F4 4.51153
ADGRF2 adhesion G protein-coupled receptor F2 4.51153
OPN5 opsin 5 4.51153
PLA2G7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) 3.12177
CD2AP CD2-associated protein 3.12177
TDRD6 tudor domain containing 6 3.12177
PTCHD4 patched domain containing 4 3.12177
SLC25A27 solute carrier family 25, member 27 3.12177
FAM174B family with sequence similarity 174, member B 3.12177
RHAG Rh-associated glycoprotein 3.12177
ADGRF1 adhesion G protein-coupled receptor F1 3.12177
CRISP3 cysteine-rich secretory protein 3 3.12177
CRISP2 cysteine-rich secretory protein 2 3.12177
ANKRD66 ankyrin repeat domain 66 3.12177
RCAN2 regulator of calcineurin 2 3.12177
DEFB133 defensin, beta 133 3.12177
C6ORF141 chromosome 6 open reading frame 141 3.12177
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 3.12177
PGK2 phosphoglycerate kinase 2 3.12177
ADGRF5 adhesion G protein-coupled receptor F5 3.12177
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1 3.12177
MEP1A meprin A, alpha (PABA peptide hydrolase) 3.12177
ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 3.12177
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) 3.12177
CENPQ centromere protein Q 2.93899
MUT methylmalonyl CoA mutase 2.93899
GLYATL3 glycine-N-acyltransferase-like 3 2.93899
CLIC5 chloride intracellular channel 5 2.93899
CRISP1 cysteine-rich secretory protein 1 2.76305
CCL28 chemokine (C-C motif) ligand 28 2.18124
ZNF131 zinc finger protein 131 2.18124
LOC648987 uncharacterized LOC648987 2.18124
LOC100132356 uncharacterized LOC100132356 2.18124
LOC153684 uncharacterized LOC153684 2.18124
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 2.18124
LOC100506639 uncharacterized LOC100506639 2.18124
GHR growth hormone receptor 2.18124
ANXA2R annexin A2 receptor 2.18124
C5ORF34 chromosome 5 open reading frame 34 2.17694
C5ORF28 chromosome 5 open reading frame 28 2.17694
SEPP1 selenoprotein P, plasma, 1 2.17694
PAIP1 poly(A) binding protein interacting protein 1 2.17694
MRPS30 mitochondrial ribosomal protein S30 2.17694
CCDC152 coiled-coil domain containing 152 2.17694
FGF10 fibroblast growth factor 10 2.16947
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 2.16947
NNT nicotinamide nucleotide transhydrogenase 2.16816
LOC340107 uncharacterized LOC340107 2.16307
LOC100507217 2.14116
MIR3175 microRNA 3175 2.14116
ASB9P1 ankyrin repeat and SOCS box containing 9 pseudogene 1 2.14116
CHD2 chromodomain helicase DNA binding protein 2 2.14116
CDH10 cadherin 10, type 2 (T2-cadherin) 2.05014
IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) 2.04842
IGHE immunoglobulin heavy constant epsilon 2.04816
IGHD immunoglobulin heavy constant delta 2.04803
ADAM6 ADAM metallopeptidase domain 6 (pseudogene) 2.04767
KIAA0125 KIAA0125 2.04731
LINC00226 long intergenic non-protein coding RNA 226 2.04712

low copy number

Symbol Name Standardized Value
CCDC57 coiled-coil domain containing 57 -3.2703
FASN fatty acid synthase -3.24687
DCXR dicarbonyl/L-xylulose reductase -3.11641
ASPSCR1 alveolar soft part sarcoma chromosome region, candidate 1 -3.11641
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) -3.11641
DUS1L dihydrouridine synthase 1-like (S. cerevisiae) -3.11641
LRRC45 leucine rich repeat containing 45 -3.11641
GPS1 G protein pathway suppressor 1 -3.11641
RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase -3.11641
STRA13 stimulated by retinoic acid 13 -3.11641
CES1P1 carboxylesterase 1 pseudogene 1 -2.74485