NCI-H211 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description Human small cell lung cancer cell line. (BRENDA Tissue and Enzyme Source Ontology, BTO_0004427)
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Genes

83 genes with high or low copy number in NCI-H211 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
MIR30B microRNA 30b 2.22633
MIR30D microRNA 30d 2.22633
ZFAT-AS1 ZFAT antisense RNA 1 2.22558
LOC286094 2.22558
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 2.22558
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 2.22558
ZFAT zinc finger and AT hook domain containing 2.22291
LINC00536 long intergenic non-protein coding RNA 536 2.21727
HHLA1 HERV-H LTR-associating 1 2.21258
EFR3A EFR3 homolog A (S. cerevisiae) 2.21096
OC90 otoconin 90 2.21096
ASAP1-IT1 ASAP1 intronic transcript 1 2.20053
MIR5194 microRNA 5194 2.20053
FAM49B family with sequence similarity 49, member B 2.19863
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 2.19863
ADCY8 adenylate cyclase 8 (brain) 2.19301
GSDMC gasdermin C 2.18778
DERL1 derlin 1 2.18778
FAM83A family with sequence similarity 83, member A 2.18778
ZHX2 zinc fingers and homeoboxes 2 2.18778
FAM83A-AS1 FAM83A antisense RNA 1 2.18778
C8ORF76 chromosome 8 open reading frame 76 2.18124
MIR4663 microRNA 4663 2.18124
RNF139 ring finger protein 139 2.17694
KLHL38 kelch-like family member 38 2.17694
ZHX1 zinc fingers and homeoboxes 1 2.16947
FBXO32 F-box protein 32 2.16947
WDYHV1 WDYHV motif containing 1 2.16947
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae) 2.16947
ATAD2 ATPase family, AAA domain containing 2 2.16947
ANXA13 annexin A13 2.16816
TATDN1 TatD DNase domain containing 1 2.16816
MTSS1 metastasis suppressor 1 2.16816
TMEM65 transmembrane protein 65 2.16816
NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 2.16816
FER1L6-AS1 FER1L6 antisense RNA 1 2.16625
FAM91A1 family with sequence similarity 91, member A1 2.16625
ZNF572 zinc finger protein 572 2.16564
KIAA0196 KIAA0196 2.16459
SQLE squalene epoxidase 2.16459
FER1L6 fer-1-like family member 6 2.16459
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 2.16307
TRIB1 tribbles pseudokinase 1 2.16176
CCDC26 CCDC26 long non-coding RNA 2.16091
LINC00861 long intergenic non-protein coding RNA 861 2.15967
SNORA25 small nucleolar RNA, H/ACA box 25 2.15953
FAM84B family with sequence similarity 84, member B 2.15847
PCAT1 prostate cancer associated transcript 1 (non-protein coding) 2.08634
MIR1206 microRNA 1206 2.07612
MIR1205 microRNA 1205 2.07136
MIR1208 microRNA 1208 2.07136
MIR1207 microRNA 1207 2.07136
TMEM75 transmembrane protein 75 2.06401
CCAT1 colon cancer associated transcript 1 (non-protein coding) 2.0614
NDRG1 N-myc downstream regulated 1 2.05864
POU5F1B POU class 5 homeobox 1B 2.05836
SLA Src-like-adaptor 2.05778
WISP1 WNT1 inducible signaling pathway protein 1 2.05778
MIR2053 microRNA 2053 2.05778
HPYR1 Helicobacter pylori responsive 1 (non-protein coding) 2.05635
LRRC6 leucine rich repeat containing 6 2.0557
CSMD3 CUB and Sushi multiple domains 3 2.05477
PHF20L1 PHD finger protein 20-like 1 2.05441
TMEM71 transmembrane protein 71 2.05422
TRPS1 trichorhinophalangeal syndrome I 2.05422
KCNQ3 potassium channel, voltage gated KQT-like subfamily Q, member 3 2.054
TG thyroglobulin 2.054
MIR1204 microRNA 1204 2.04661
PVT1 Pvt1 oncogene (non-protein coding) 2.04585

low copy number

Symbol Name Standardized Value
AFF4 AF4/FMR2 family, member 4 -5.12655
PAGE2B P antigen family, member 2B -3.50611
PAGE2 P antigen family, member 2 (prostate associated) -3.50611
MIR1233-2 microRNA 1233-2 -3.49112
GOLGA8B golgin A8 family, member B -3.46838
ADCY2 adenylate cyclase 2 (brain) -3.45316
LOC442132 golgin A6 family-like 1 pseudogene -3.45272
DTX2P1-UPK3BP1-PMS2P11 DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene -3.2703
NFE2L2 nuclear factor, erythroid 2-like 2 -3.2703
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -3.24687
NRK Nik related kinase -2.969
TEX13A testis expressed 13A -2.93929
IL1RAPL2 interleukin 1 receptor accessory protein-like 2 -2.93929
PDE4D phosphodiesterase 4D, cAMP-specific -2.83605