NCI-H2087 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

203 genes with high or low copy number in NCI-H2087 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
NAF1 nuclear assembly factor 1 ribonucleoprotein 4.51153
IGFBP6 insulin-like growth factor binding protein 6 3.12177
ZNF740 zinc finger protein 740 3.12177
ITGB7 integrin, beta 7 3.12177
SOAT2 sterol O-acyltransferase 2 3.12177
LOC283335 uncharacterized LOC283335 3.12177
RARG retinoic acid receptor, gamma 3.12177
TNS2 tensin 2 3.12177
CSAD cysteine sulfinic acid decarboxylase 3.12177
KRT8 keratin 8, type II 3.12177
KRT18 keratin 18, type I 3.12177
SPRYD3 SPRY domain containing 3 3.12177
KRT72 keratin 72, type II 2.93899
KRT78 keratin 78, type II 2.93899
KRT2 keratin 2, type II 2.93899
KRT5 keratin 5, type II 2.93899
CELA1 chymotrypsin-like elastase family, member 1 2.93899
KRT71 keratin 71, type II 2.93899
KRT73 keratin 73, type II 2.93899
DAZAP2 DAZ associated protein 2 2.93899
KRT74 keratin 74, type II 2.93899
KRT75 keratin 75, type II 2.93899
TFCP2 transcription factor CP2 2.93899
SMAGP small cell adhesion glycoprotein 2.93899
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2.93899
KRT84 keratin 84, type II 2.93899
BIN2 bridging integrator 2 2.93899
POU6F1 POU class 6 homeobox 1 2.93899
EIF4B eukaryotic translation initiation factor 4B 2.93899
SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8 2.93899
KRT81 keratin 81, type II 2.93899
KRT82 keratin 82, type II 2.93899
KRT6B keratin 6B, type II 2.93899
KRT6C keratin 6C, type II 2.93899
KRT6A keratin 6A, type II 2.93899
KRT83 keratin 83, type II 2.93899
KRT85 keratin 85, type II 2.93899
KRT86 keratin 86, type II 2.93899
KRT3 keratin 3, type II 2.76305
KRT1 keratin 1, type II 2.76305
KRT4 keratin 4, type II 2.76305
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 2.76305
KRT77 keratin 77, type II 2.76305
KRT76 keratin 76, type II 2.76305
KRT79 keratin 79, type II 2.76305
MYO3A myosin IIIA 2.76305
LINC00202-1 long intergenic non-protein coding RNA 202-1 2.64759
LINC00202-2 long intergenic non-protein coding RNA 202-2 2.64759
PRPF39 pre-mRNA processing factor 39 2.64759
C14ORF28 chromosome 14 open reading frame 28 2.64759
ABI1 abl-interactor 1 2.64759
APBB1IP amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein 2.64759
FKBP3 FK506 binding protein 3, 25kDa 2.64759
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 2.64759
CREM cAMP responsive element modulator 2.64759
KLHL28 kelch-like family member 28 2.64759
ANKRD26 ankyrin repeat domain 26 2.64759
SNORD127 small nucleolar RNA, C/D box 127 2.64759
CUL2 cullin 2 2.64759
FANCM Fanconi anemia, complementation group M 2.64759
MIS18BP1 MIS18 binding protein 1 2.64759
LINC00264 long intergenic non-protein coding RNA 264 2.64759
RPL10L ribosomal protein L10-like 2.59653
FAM19A4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 2.59653
EOGT EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase 2.59653
TMF1 TATA element modulatory factor 1 2.59653
CCNY cyclin Y 2.59653
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5 2.59653
MIR3136 microRNA 3136 2.59653
MIR4307 microRNA 4307 2.59653
FSCB fibrous sheath CABYR binding protein 2.59653
LMOD3 leiomodin 3 (fetal) 2.59653
UBA3 ubiquitin-like modifier activating enzyme 3 2.59653
LINC00871 long intergenic non-protein coding RNA 871 2.59653
LINC00838 long intergenic non-protein coding RNA 838 2.49065
FRMD4B FERM domain containing 4B 2.49065
MIR548Y microRNA 548y 2.44392
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 2.41451
G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2.39327
XRCC6BP1 XRCC6 binding protein 1 2.39327
LOC100506071 uncharacterized LOC100506071 2.36889
LOC100506844 uncharacterized LOC100506844 2.36889
COCH cochlin 2.36889
SCFD1 sec1 family domain containing 1 2.36889
SEC23A Sec23 homolog A (S. cerevisiae) 2.35236
PRKD1 protein kinase D1 2.35236
MIA2 melanoma inhibitory activity 2 2.35236
CFL2 cofilin 2 (muscle) 2.35236
LINC01551 long intergenic non-protein coding RNA 1551 2.35236
AP4S1 adaptor-related protein complex 4, sigma 1 subunit 2.35236
FOXG1 forkhead box G1 2.35236
GEMIN2 gem (nuclear organelle) associated protein 2 2.35236
PNN pinin, desmosome associated protein 2.35236
EGLN3 egl-9 family hypoxia-inducible factor 3 2.35236
TRAPPC6B trafficking protein particle complex 6B 2.35236
MIR624 microRNA 624 2.35236
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 2.3178
MIR548AI microRNA 548ai 2.3178
SRP54 signal recognition particle 54kDa 2.3178
BAZ1A bromodomain adjacent to zinc finger domain, 1A 2.3178
STRN3 striatin, calmodulin binding protein 3 2.3178
LINC00639 long intergenic non-protein coding RNA 639 2.3178
FAM177A1 family with sequence similarity 177, member A1 2.3178
SPTSSA serine palmitoyltransferase, small subunit A 2.3178
EAPP E2F-associated phosphoprotein 2.3178
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1 2.3178
METTL21B methyltransferase like 21B 2.3178
MIR26A2 microRNA 26a-2 2.3178
CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 2.3178
SNX6 sorting nexin 6 2.3178
PPP2R3C protein phosphatase 2, regulatory subunit B'', gamma 2.30944
KIAA0391 KIAA0391 2.30944
MARCH9 membrane-associated ring finger (C3HC4) 9 2.30944
METTL1 methyltransferase like 1 2.30944
AVIL advillin 2.30944
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 2.30944
DTX3 deltex 3, E3 ubiquitin ligase 2.30944
SSTR1 somatostatin receptor 1 2.30944
PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 2.30944
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1 2.30944
CLEC14A C-type lectin domain family 14, member A 2.30944
TSFM Ts translation elongation factor, mitochondrial 2.30944
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 2.283
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 2.283
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 2.283
HEATR5A HEAT repeat containing 5A 2.283
ARHGEF25 Rho guanine nucleotide exchange factor (GEF) 25 2.283
FOXA1 forkhead box A1 2.283
CDK4 cyclin-dependent kinase 4 2.283
AKAP6 A kinase (PRKA) anchor protein 6 2.283
AGAP2-AS1 AGAP2 antisense RNA 1 2.283
DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2.283
GPR33 G protein-coupled receptor 33 (gene/pseudogene) 2.283
MIR4503 microRNA 4503 2.283
SLC26A10 solute carrier family 26, member 10 2.283
TSPAN31 tetraspanin 31 2.283
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 2.26395
TTC6 tetratricopeptide repeat domain 6 2.26395
ARHGAP5 Rho GTPase activating protein 5 2.26395
LINC00609 long intergenic non-protein coding RNA 609 2.26395
INSM2 insulinoma-associated 2 2.26395
BRMS1L breast cancer metastasis-suppressor 1-like 2.26395
NUBPL nucleotide binding protein-like 2.26395
ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head) 2.26395
PTCSC3 papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding) 2.26395
PAX9 paired box 9 2.25904
NKX2-8 NK2 homeobox 8 2.25904
SLC25A21-AS1 SLC25A21 antisense RNA 1 2.25904
NKX2-1 NK2 homeobox 1 2.25904
MIPOL1 mirror-image polydactyly 1 2.25904
SFTA3 surfactant associated 3 2.24845
MBIP MAP3K12 binding inhibitory protein 1 2.24845
SLC25A21 solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 2.2355
DPPA3 developmental pluripotency associated 3 2.22917
KLHL38 kelch-like family member 38 2.17694
WDYHV1 WDYHV motif containing 1 2.16947
ATAD2 ATPase family, AAA domain containing 2 2.16947
ZHX1 zinc fingers and homeoboxes 1 2.16947
FBXO32 F-box protein 32 2.16947
ANXA13 annexin A13 2.16816
FAM91A1 family with sequence similarity 91, member A1 2.16625
ZNF572 zinc finger protein 572 2.16564
SNORA31 small nucleolar RNA, H/ACA box 31 2.16564
FER1L6 fer-1-like family member 6 2.16459
SQLE squalene epoxidase 2.16459
KIAA0196 KIAA0196 2.16459
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 2.16307
TRIB1 tribbles pseudokinase 1 2.16176
LINC00861 long intergenic non-protein coding RNA 861 2.15967
SNORA25 small nucleolar RNA, H/ACA box 25 2.15953
FAM84B family with sequence similarity 84, member B 2.15847
FAM179B family with sequence similarity 179, member B 2.10992
NOVA1 neuro-oncological ventral antigen 1 2.10038
MITF microphthalmia-associated transcription factor 2.09431
LINC00645 long intergenic non-protein coding RNA 645 2.09431
PARD3 par-3 family cell polarity regulator 2.09294
LINC00648 long intergenic non-protein coding RNA 648 2.09073
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 2.08712
PCAT1 prostate cancer associated transcript 1 (non-protein coding) 2.08634
CTAGE5 CTAGE family, member 5 2.07822
FBXO33 F-box protein 33 2.07822
LOC100288846 uncharacterized LOC100288846 2.07776
ALG10 ALG10, alpha-1,2-glucosyltransferase 2.07776
MIR1206 microRNA 1206 2.07612
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 2.0731
NPAS3 neuronal PAS domain protein 3 2.0731
MIR1207 microRNA 1207 2.07136
MIR1205 microRNA 1205 2.07136
MIR1208 microRNA 1208 2.07136
DNM1L dynamin 1-like 2.06626
PKP2 plakophilin 2 2.06626
SYT10 synaptotagmin X 2.06626
YARS2 tyrosyl-tRNA synthetase 2, mitochondrial 2.06473
TMEM75 transmembrane protein 75 2.06401
CCAT1 colon cancer associated transcript 1 (non-protein coding) 2.0614
POU5F1B POU class 5 homeobox 1B 2.05836
ADAM6 ADAM metallopeptidase domain 6 (pseudogene) 2.04767
KIAA0125 KIAA0125 2.04731
MIR1204 microRNA 1204 2.04661
PVT1 Pvt1 oncogene (non-protein coding) 2.04585

low copy number

Symbol Name Standardized Value
LOC728323 uncharacterized LOC728323 -3.48051
RHD Rh blood group, D antigen -3.17091
CES1P1 carboxylesterase 1 pseudogene 1 -2.74485