NCI-H2052 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: mesothelioma (pleura primary) (Cell Line Ontology, CLO_0008042)
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Genes

153 genes with high or low copy number in NCI-H2052 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value

low copy number

Symbol Name Standardized Value
C1ORF220 chromosome 1 open reading frame 220 -3.83684
LAMC1 laminin, gamma 1 (formerly LAMB2) -3.83684
STX6 syntaxin 6 -3.83684
NMNAT2 nicotinamide nucleotide adenylyltransferase 2 -3.83684
MIR3121 microRNA 3121 -3.83684
NPL N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) -3.83684
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) -3.83684
ZNF648 zinc finger protein 648 -3.83684
ANGPTL1 angiopoietin-like 1 -3.83684
XPR1 xenotropic and polytropic retrovirus receptor 1 -3.83684
SMG7 SMG7 nonsense mediated mRNA decay factor -3.83684
TEX35 testis expressed 35 -3.83684
MIR4424 microRNA 4424 -3.83684
ACBD6 acyl-CoA binding domain containing 6 -3.83684
MR1 major histocompatibility complex, class I-related -3.83684
TDRD5 tudor domain containing 5 -3.83684
SHCBP1L SHC SH2-domain binding protein 1-like -3.83684
TEDDM1 transmembrane epididymal protein 1 -3.83684
TOR1AIP1 torsin A interacting protein 1 -3.83684
TOR1AIP2 torsin A interacting protein 2 -3.83684
KIAA1614 KIAA1614 -3.83684
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -3.83684
APOBEC4 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) -3.83684
TOR3A torsin family 3, member A -3.83684
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 -3.83684
LOC284648 uncharacterized LOC284648 -3.83684
IER5 immediate early response 5 -3.83684
NCF2 neutrophil cytosolic factor 2 -3.83684
LAMC2 laminin, gamma 2 -3.83684
LINC00272 long intergenic non-protein coding RNA 272 -3.83684
SMG7-AS1 SMG7 antisense RNA 1 -3.83684
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -3.83684
LHX4 LIM homeobox 4 -3.83684
RGSL1 regulator of G-protein signaling like 1 -3.83684
CEP350 centrosomal protein 350kDa -3.83684
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin) -3.83684
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -3.83684
FAM20B family with sequence similarity 20, member B -3.83684
FAM163A family with sequence similarity 163, member A -3.83684
SOAT1 sterol O-acyltransferase 1 -3.83684
GM140 uncharacterized LOC100287948 -3.83684
QSOX1 quiescin Q6 sulfhydryl oxidase 1 -3.83684
FLJ23867 uncharacterized protein FLJ23867 -3.83684
RGS16 regulator of G-protein signaling 16 -3.83684
RGS8 regulator of G-protein signaling 8 -3.83684
GLUL glutamate-ammonia ligase -3.83684
AXDND1 axonemal dynein light chain domain containing 1 -3.7119
CACNA1E calcium channel, voltage-dependent, R type, alpha 1E subunit -3.7119
GPR174 G protein-coupled receptor 174 -3.56449
FASLG Fas ligand (TNF superfamily, member 6) -3.32901
LOC653160 uncharacterized LOC653160 -3.32901
ZMYM6NB ZMYM6 neighbor -3.32901
SUCO SUN domain containing ossification factor -3.32901
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18 -3.29865
PIGC phosphatidylinositol glycan anchor biosynthesis, class C -3.29865
LOC730159 uncharacterized LOC730159 -3.29865
C1ORF105 chromosome 1 open reading frame 105 -3.29865
SLC9C2 solute carrier family 9, member C2 (putative) -3.29865
LOC440704 uncharacterized LOC440704 -3.29865
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 -3.29865
ASTN1 astrotactin 1 -3.29865
ANKRD45 ankyrin repeat domain 45 -3.29865
LOC100506023 uncharacterized LOC100506023 -3.29865
AKAP11 A kinase (PRKA) anchor protein 11 -3.29865
DARS2 aspartyl-tRNA synthetase 2, mitochondrial -3.29865
CENPL centromere protein L -3.29865
KLHL20 kelch-like family member 20 -3.29865
PRDX6 peroxiredoxin 6 -3.29865
SNORD77 small nucleolar RNA, C/D box 77 -3.27164
KIAA0040 KIAA0040 -3.2703
MIR488 microRNA 488 -3.2703
SEC16B SEC16 homolog B (S. cerevisiae) -3.2703
TNN tenascin N -3.2703
LOC730102 quinone oxidoreductase-like protein 2 pseudogene -3.24687
RFWD2 ring finger and WD repeat domain 2, E3 ubiquitin protein ligase -3.24687
PAPPA2 pappalysin 2 -3.24687
TNR tenascin R -3.24687
SCARNA3 small Cajal body-specific RNA 3 -3.24687
SNORD81 small nucleolar RNA, C/D box 81 -3.17697
KCNT2 potassium channel, sodium activated subfamily T, member 2 -3.17182
SNORD78 small nucleolar RNA, C/D box 78 -3.15179
RGS21 regulator of G-protein signaling 21 -3.14331
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) -3.14331
RGS18 regulator of G-protein signaling 18 -3.14331
B3GALT2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 -3.14331
PDC phosducin -3.12964
OCLM oculomedin -3.12964
GLRX2 glutaredoxin 2 -3.12964
RGS13 regulator of G-protein signaling 13 -3.12964
SWT1 SWT1 RNA endoribonuclease homolog (S. cerevisiae) -3.12964
GAS5-AS1 GAS5 antisense RNA 1 -3.12964
MIR548F1 microRNA 548f-1 -3.12964
CACYBP calcyclin binding protein -3.12964
RNF2 ring finger protein 2 -3.12964
HMCN1 hemicentin 1 -3.12964
SNORD76 small nucleolar RNA, C/D box 76 -3.12964
GAS5 growth arrest-specific 5 (non-protein coding) -3.12964
SNORD44 small nucleolar RNA, C/D box 44 -3.12964
MIR1278 microRNA 1278 -3.12964
IVNS1ABP influenza virus NS1A binding protein -3.12964
GPR52 G protein-coupled receptor 52 -3.12964
TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like -3.12964
RGS2 regulator of G-protein signaling 2 -3.12964
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -3.12964
SNORD79 small nucleolar RNA, C/D box 79 -3.12964
TROVE2 TROVE domain family, member 2 -3.12964
MRPS14 mitochondrial ribosomal protein S14 -3.12964
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1 -3.12964
C1ORF27 chromosome 1 open reading frame 27 -3.12964
PRG4 proteoglycan 4 -3.12964
FAM129A family with sequence similarity 129, member A -3.12964
TPR translocated promoter region, nuclear basket protein -3.12964
RGS1 regulator of G-protein signaling 1 -3.12964
ZBTB37 zinc finger and BTB domain containing 37 -3.12964
SNORD80 small nucleolar RNA, C/D box 80 -3.12964
SNORD47 small nucleolar RNA, C/D box 47 -3.12964
RNU6-72P RNA, U6 small nuclear 72, pseudogene -3.12964
RC3H1 ring finger and CCCH-type domains 1 -3.12964
RASAL2-AS1 RASAL2 antisense RNA 1 -3.11641
EDEM3 ER degradation enhancer, mannosidase alpha-like 3 -3.11641
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -3.11641
RGL1 ral guanine nucleotide dissociation stimulator-like 1 -3.11641
TSEN15 TSEN15 tRNA splicing endonuclease subunit -3.11641
C1ORF21 chromosome 1 open reading frame 21 -3.11641
SNORD75 small nucleolar RNA, C/D box 75 -3.07287
CDC73 cell division cycle 73 -3.06578
UCHL5 ubiquitin carboxyl-terminal hydrolase L5 -3.05881
RASAL2 RAS protein activator like 2 -3.05196
LATS2 large tumor suppressor kinase 2 -3.0386
STARD8 StAR-related lipid transfer (START) domain containing 8 -3.03082
RABGAP1L RAB GTPase activating protein 1-like -3.00478
PABPC5 poly(A) binding protein, cytoplasmic 5 -2.89302
SSX6 synovial sarcoma, X breakpoint 6 (pseudogene) -2.87269
ZNF630 zinc finger protein 630 -2.87269
SPACA5 sperm acrosome associated 5 -2.87269
SNORD74 small nucleolar RNA, C/D box 74 -2.86885
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 -2.84635
C9ORF72 chromosome 9 open reading frame 72 -2.83538
IFNK interferon, kappa -2.83538
EQTN equatorin, sperm acrosome associated -2.83167
MOB3B MOB kinase activator 3B -2.83114
LINC00032 long intergenic non-protein coding RNA 32 -2.82909
LRRC19 leucine rich repeat containing 19 -2.82668
TEK TEK tyrosine kinase, endothelial -2.82318
CAAP1 caspase activity and apoptosis inhibitor 1 -2.82318
PLAA phospholipase A2-activating protein -2.82318
IFT74 intraflagellar transport 74 -2.82083
LINGO2 leucine rich repeat and Ig domain containing 2 -2.79933
LOC100506422 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -2.79871
TUSC1 tumor suppressor candidate 1 -2.78941
DMD dystrophin -2.78077
IZUMO3 IZUMO family member 3 -2.77409
ELAVL2 ELAV like neuron-specific RNA binding protein 2 -2.74526