NCI-H1876 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: carcinoma; classic small cell lung cancer (lung primary) (Cell Line Ontology, CLO_0008027)
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Genes

495 genes with high or low copy number in NCI-H1876 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
XCL1 chemokine (C motif) ligand 1 4.51153
DUSP27 dual specificity phosphatase 27 (putative) 4.51153
XCL2 chemokine (C motif) ligand 2 4.51153
ADCY10 adenylate cyclase 10 (soluble) 4.51153
NME7 NME/NM23 family member 7 4.51153
MPC2 mitochondrial pyruvate carrier 2 4.51153
SLC19A2 solute carrier family 19 (thiamine transporter), member 2 4.51153
TADA1 transcriptional adaptor 1 4.51153
MPZL1 myelin protein zero-like 1 4.51153
DCAF6 DDB1 and CUL4 associated factor 6 4.51153
GPA33 glycoprotein A33 (transmembrane) 4.51153
MIR557 microRNA 557 4.51153
GPR161 G protein-coupled receptor 161 4.51153
FMO9P flavin containing monooxygenase 9 pseudogene 4.51153
ANKRD36BP1 ankyrin repeat domain 36B pseudogene 1 4.51153
TBX19 T-box 19 4.51153
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 4.51153
LOC100505918 uncharacterized LOC100505918 4.51153
POGK pogo transposable element with KRAB domain 4.51153
CCDC181 coiled-coil domain containing 181 4.51153
TIPRL TOR signaling pathway regulator 4.51153
MAEL maelstrom spermatogenic transposon silencer 4.51153
ILDR2 immunoglobulin-like domain containing receptor 2 4.51153
BLZF1 basic leucine zipper nuclear factor 1 4.51153
SFT2D2 SFT2 domain containing 2 4.51153
LOC440700 carbonic anhydrase XIV (CA14) pseudogene 3.12177
METTL18 methyltransferase like 18 3.12177
UCK2 uridine-cytidine kinase 2 3.12177
DPT dermatopontin 3.12177
CREG1 cellular repressor of E1A-stimulated genes 1 3.12177
LOC400794 uncharacterized LOC400794 3.12177
FAM78B family with sequence similarity 78, member B 3.12177
RCSD1 RCSD domain containing 1 3.12177
MGST3 microsomal glutathione S-transferase 3 3.12177
RXRG retinoid X receptor, gamma 3.12177
SELE selectin E 3.12177
LMX1A LIM homeobox transcription factor 1, alpha 3.12177
F5 coagulation factor V (proaccelerin, labile factor) 3.12177
ALDH9A1 aldehyde dehydrogenase 9 family, member A1 3.12177
POU2F1 POU class 2 homeobox 1 3.12177
TMCO1 transmembrane and coiled-coil domains 1 3.12177
SELP selectin P (granule membrane protein 140kDa, antigen CD62) 3.12177
MIR921 microRNA 921 3.12177
SELL selectin L 3.12177
CD247 CD247 molecule 3.12177
MIR3658 microRNA 3658 3.12177
LRRC52 leucine rich repeat containing 52 3.12177
LINC00626 long intergenic non-protein coding RNA 626 3.12177
FMO1 flavin containing monooxygenase 1 2.93899
MIR1295A microRNA 1295a 2.93899
TOP1P1 topoisomerase (DNA) I pseudogene 1 2.93899
GORAB golgin, RAB6-interacting 2.93899
METTL13 methyltransferase like 13 2.93899
FMO2 flavin containing monooxygenase 2 (non-functional) 2.93899
MIR1295B microRNA 1295b 2.93899
FMO6P flavin containing monooxygenase 6 pseudogene 2.93899
FMO4 flavin containing monooxygenase 4 2.93899
FMO3 flavin containing monooxygenase 3 2.93899
USP21 ubiquitin specific peptidase 21 2.76305
MIR3120 microRNA 3120 2.76305
ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 2.76305
PPOX protoporphyrinogen oxidase 2.76305
OR10J3 olfactory receptor, family 10, subfamily J, member 3 2.76305
SLAMF8 SLAM family member 8 2.76305
MROH9 maestro heat-like repeat family member 9 2.76305
AIM2 absent in melanoma 2 2.76305
OR10J5 olfactory receptor, family 10, subfamily J, member 5 2.76305
OR10J1 olfactory receptor, family 10, subfamily J, member 1 2.76305
OLFML2B olfactomedin-like 2B 2.76305
ITLN2 intelectin 2 2.76305
ITLN1 intelectin 1 (galactofuranose binding) 2.76305
IFI16 interferon, gamma-inducible protein 16 2.76305
APCS amyloid P component, serum 2.76305
C1ORF204 chromosome 1 open reading frame 204 2.76305
MIR4654 microRNA 4654 2.76305
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 2.76305
GPATCH4 G patch domain containing 4 2.76305
KIRREL kin of IRRE like (Drosophila) 2.76305
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32) 2.76305
PRCC papillary renal cell carcinoma (translocation-associated) 2.76305
DNM3OS DNM3 opposite strand/antisense RNA 2.76305
TAGLN2 transgelin 2 2.76305
INSRR insulin receptor-related receptor 2.76305
KLHDC9 kelch domain containing 9 2.76305
MYOC myocilin, trabecular meshwork inducible glucocorticoid response 2.76305
CRABP2 cellular retinoic acid binding protein 2 2.76305
DUSP23 dual specificity phosphatase 23 2.76305
HAPLN2 hyaluronan and proteoglycan link protein 2 2.76305
DNM3 dynamin 3 2.76305
PVRL4 poliovirus receptor-related 4 2.76305
B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 2.76305
NUF2 NUF2, NDC80 kinetochore complex component 2.76305
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide 2.76305
SH2D2A SH2 domain containing 2A 2.76305
PYHIN1 pyrin and HIN domain family, member 1 2.76305
LY9 lymphocyte antigen 9 2.76305
F11R F11 receptor 2.76305
PFDN2 prefoldin subunit 2 2.76305
NES nestin 2.76305
FCRL6 Fc receptor-like 6 2.76305
FCRLA Fc receptor-like A 2.76305
FCRLB Fc receptor-like B 2.76305
LOC646268 hCG1654703 2.76305
CRP C-reactive protein, pentraxin-related 2.76305
ARHGAP30 Rho GTPase activating protein 30 2.76305
TTC24 tetratricopeptide repeat domain 24 2.76305
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 2.76305
VAMP4 vesicle-associated membrane protein 4 2.76305
PRRC2C proline-rich coiled-coil 2C 2.76305
UFC1 ubiquitin-fold modifier conjugating enzyme 1 2.76305
TSTD1 thiosulfate sulfurtransferase (rhodanese)-like domain containing 1 2.76305
CFAP126 cilia and flagella associated protein 126 2.76305
CADM3 cell adhesion molecule 3 2.76305
BCAN brevican 2.76305
SH2D1B SH2 domain containing 1B 2.76305
DUSP12 dual specificity phosphatase 12 2.76305
USF1 upstream transcription factor 1 2.76305
MRPL24 mitochondrial ribosomal protein L24 2.76305
RRNAD1 ribosomal RNA adenine dimethylase domain containing 1 2.76305
MPZ myelin protein zero 2.76305
VSIG8 V-set and immunoglobulin domain containing 8 2.76305
CD244 CD244 molecule, natural killer cell receptor 2B4 2.76305
MIR556 microRNA 556 2.76305
C1ORF111 chromosome 1 open reading frame 111 2.76305
APOA1BP apolipoprotein A-I binding protein 2.76305
HDGF hepatoma-derived growth factor 2.76305
C1ORF226 chromosome 1 open reading frame 226 2.76305
HSPA6 heat shock 70kDa protein 6 (HSP70B') 2.76305
DEDD death effector domain containing 2.76305
NIT1 nitrilase 1 2.76305
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2 2.76305
RPL31P11 ribosomal protein L31 pseudogene 11 2.76305
MIR5187 microRNA 5187 2.64759
CD1B CD1b molecule 2.64759
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 2.64759
CD48 CD48 molecule 2.64759
ATF6 activating transcription factor 6 2.64759
ETV3 ets variant 3 2.64759
CD1A CD1a molecule 2.64759
TOMM40L translocase of outer mitochondrial membrane 40 homolog (yeast)-like 2.64759
CD1C CD1c molecule 2.64759
FCRL5 Fc receptor-like 5 2.64759
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 2.64759
CD1E CD1e molecule 2.64759
PIGM phosphatidylinositol glycan anchor biosynthesis, class M 2.64759
NTRK1 neurotrophic tyrosine kinase, receptor, type 1 2.64759
UHMK1 U2AF homology motif (UHM) kinase 1 2.64759
OR10T2 olfactory receptor, family 10, subfamily T, member 2 2.64759
MIR765 microRNA 765 2.64759
NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase) 2.64759
KCNJ9 potassium channel, inwardly rectifying subfamily J, member 9 2.64759
CD1D CD1d molecule 2.64759
PEAR1 platelet endothelial aggregation receptor 1 2.64759
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide 2.64759
APOA2 apolipoprotein A-II 2.64759
KCNJ10 potassium channel, inwardly rectifying subfamily J, member 10 2.64759
CD5L CD5 molecule-like 2.64759
LRRC71 leucine rich repeat containing 71 2.64759
RGS4 regulator of G-protein signaling 4 2.64759
SLAMF7 SLAM family member 7 2.64759
RGS5 regulator of G-protein signaling 5 2.64759
FCRL1 Fc receptor-like 1 2.64759
FCRL2 Fc receptor-like 2 2.64759
FCRL3 Fc receptor-like 3 2.64759
FCRL4 Fc receptor-like 4 2.64759
OR10K2 olfactory receptor, family 10, subfamily K, member 2 2.64759
OR6P1 olfactory receptor, family 6, subfamily P, member 1 2.64759
OR10K1 olfactory receptor, family 10, subfamily K, member 1 2.64759
IGSF8 immunoglobulin superfamily, member 8 2.64759
IGSF9 immunoglobulin superfamily, member 9 2.64759
IQGAP3 IQ motif containing GTPase activating protein 3 2.64759
OR10Z1 olfactory receptor, family 10, subfamily Z, member 1 2.64759
OR10X1 olfactory receptor, family 10, subfamily X, member 1 (gene/pseudogene) 2.64759
OR10R2 olfactory receptor, family 10, subfamily R, member 2 2.64759
SLAMF9 SLAM family member 9 2.64759
OR6K6 olfactory receptor, family 6, subfamily K, member 6 2.64759
CYCSP52 cytochrome c, somatic pseudogene 52 2.64759
MNDA myeloid cell nuclear differentiation antigen 2.64759
ETV3L ets variant 3-like 2.64759
PCP4L1 Purkinje cell protein 4 like 1 2.64759
OR6N1 olfactory receptor, family 6, subfamily N, member 1 2.64759
OR6N2 olfactory receptor, family 6, subfamily N, member 2 2.64759
FCER1G Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide 2.64759
NR1I3 nuclear receptor subfamily 1, group I, member 3 2.64759
SPTA1 spectrin, alpha, erythrocytic 1 2.64759
OR6K2 olfactory receptor, family 6, subfamily K, member 2 2.64759
OR6K3 olfactory receptor, family 6, subfamily K, member 3 2.64759
PEX19 peroxisomal biogenesis factor 19 2.59653
KIAA0907 KIAA0907 2.59653
MEF2D myocyte enhancer factor 2D 2.59653
PEA15 phosphoprotein enriched in astrocytes 15 2.59653
CCT3 chaperonin containing TCP1, subunit 3 (gamma) 2.59653
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 2.59653
SSR2 signal sequence receptor, beta (translocon-associated protein beta) 2.59653
YY1AP1 YY1 associated protein 1 2.59653
GON4L gon-4-like (C. elegans) 2.59653
PMF1-BGLAP PMF1-BGLAP readthrough 2.59653
DAP3 death associated protein 3 2.59653
RAB25 RAB25, member RAS oncogene family 2.59653
PMF1 polyamine-modulated factor 1 2.59653
RXFP4 relaxin/insulin-like family peptide receptor 4 2.59653
RUSC1 RUN and SH3 domain containing 1 2.59653
NHLH1 nescient helix loop helix 1 2.59653
POU5F1P4 POU class 5 homeobox 1 pseudogene 4 2.59653
TMEM79 transmembrane protein 79 2.59653
SLC25A44 solute carrier family 25, member 44 2.59653
BGLAP bone gamma-carboxyglutamate (gla) protein 2.59653
CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle) 2.59653
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 2.59653
RIT1 Ras-like without CAAX 1 2.59653
TSACC TSSK6 activating co-chaperone 2.59653
UBQLN4 ubiquilin 4 2.59653
ASH1L-AS1 ASH1L antisense RNA 1 2.59653
MSTO2P misato family member 2, pseudogene 2.59653
MSTO1 misato 1, mitochondrial distribution and morphology regulator 2.59653
PAQR6 progestin and adipoQ receptor family member VI 2.59653
GLMP glycosylated lysosomal membrane protein 2.59653
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 2.59653
SMG5 SMG5 nonsense mediated mRNA decay factor 2.59653
SYT11 synaptotagmin XI 2.59653
SLAMF1 signaling lymphocytic activation molecule family member 1 2.59653
MIR555 microRNA 555 2.59653
DCAF8 DDB1 and CUL4 associated factor 8 2.59653
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 2.59653
LAMTOR2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 2.59653
SCARNA4 small Cajal body-specific RNA 4 2.59653
MEX3A mex-3 RNA binding family member A 2.59653
VHLL von Hippel-Lindau tumor suppressor-like 2.59653
RHBG Rh family, B glycoprotein (gene/pseudogene) 2.49065
RUSC1-AS1 RUSC1 antisense RNA 1 2.49065
FDPS farnesyl diphosphate synthase 2.49065
ADAM15 ADAM metallopeptidase domain 15 2.49065
EFNA3 ephrin-A3 2.49065
SLC50A1 solute carrier family 50 (sugar efflux transporter), member 1 2.49065
EFNA4 ephrin-A4 2.49065
HCN3 hyperpolarization activated cyclic nucleotide gated potassium channel 3 2.49065
CD84 CD84 molecule 2.49065
C1ORF61 chromosome 1 open reading frame 61 2.49065
EFNA1 ephrin-A1 2.49065
LMNA lamin A/C 2.49065
MIR9-1 microRNA 9-1 2.49065
DPM3 dolichyl-phosphate mannosyltransferase polypeptide 3 2.49065
VANGL2 VANGL planar cell polarity protein 2 2.49065
MIR92B microRNA 92b 2.49065
GBA glucosidase, beta, acid 2.49065
THBS3 thrombospondin 3 2.49065
KRTCAP2 keratinocyte associated protein 2 2.49065
SCAMP3 secretory carrier membrane protein 3 2.49065
MUC1 mucin 1, cell surface associated 2.49065
SUMO1P3 SUMO1 pseudogene 3 (functional) 2.49065
COPA coatomer protein complex, subunit alpha 2.49065
NCSTN nicastrin 2.49065
FAM189B family with sequence similarity 189, member B 2.49065
TRIM46 tripartite motif containing 46 2.49065
SLAMF6 SLAM family member 6 2.49065
PKLR pyruvate kinase, liver and RBC 2.49065
CLK2 CDC-like kinase 2 2.49065
MTX1 metaxin 1 2.49065
MIR4258 microRNA 4258 2.44392
FLAD1 flavin adenine dinucleotide synthetase 1 2.44392
LOC100505666 uncharacterized LOC100505666 2.44392
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 2.44392
ZBTB7B zinc finger and BTB domain containing 7B 2.44392
CKS1B CDC28 protein kinase regulatory subunit 1B 2.44392
DCST2 DC-STAMP domain containing 2 2.44392
DCST1 DC-STAMP domain containing 1 2.44392
PBXIP1 pre-B-cell leukemia homeobox interacting protein 1 2.44392
LENEP lens epithelial protein 2.44392
PYGO2 pygopus family PHD finger 2 2.44392
PMVK phosphomevalonate kinase 2.44392
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) 2.36889
UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 2.36889
ADAR adenosine deaminase, RNA-specific 2.36889
SHE Src homology 2 domain containing E 2.36889
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3 2.36889
IL6R interleukin 6 receptor 2.35236
AQP10 aquaporin 10 2.3178
LCE6A late cornified envelope 6A 2.3178
LCE3A late cornified envelope 3A 2.3178
ATP8B2 ATPase, aminophospholipid transporter, class I, type 8B, member 2 2.3178
HAX1 HCLS1 associated protein X-1 2.3178
LCE1F late cornified envelope 1F 2.3178
LCE2D late cornified envelope 2D 2.30944
SMCP sperm mitochondria-associated cysteine-rich protein 2.30944
SPRR2D small proline-rich protein 2D 2.30944
ZMPSTE24 zinc metallopeptidase STE24 2.30944
UBAP2L ubiquitin associated protein 2-like 2.30944
LCE2C late cornified envelope 2C 2.30944
C1ORF68 chromosome 1 open reading frame 68 2.30944
TMCO2 transmembrane and coiled-coil domains 2 2.30944
C1ORF43 chromosome 1 open reading frame 43 2.30944
LCE1B late cornified envelope 1B 2.30944
LCE2B late cornified envelope 2B 2.30944
LCE1A late cornified envelope 1A 2.30944
LCE2A late cornified envelope 2A 2.30944
KPRP keratinocyte proline-rich protein 2.30944
LCE1C late cornified envelope 1C 2.30944
PPT1 palmitoyl-protein thioesterase 1 2.30944
TPM3 tropomyosin 3 2.30944
C1ORF189 chromosome 1 open reading frame 189 2.30944
SPRR3 small proline-rich protein 3 2.30944
SPRR1A small proline-rich protein 1A 2.30944
SPRR1B small proline-rich protein 1B 2.30944
IVL involucrin 2.30944
LCE4A late cornified envelope 4A 2.30944
MIR190B microRNA 190b 2.30944
JTB jumping translocation breakpoint 2.283
PRR9 proline rich 9 2.283
OTUD7B OTU deubiquitinase 7B 2.283
SPRR2G small proline-rich protein 2G 2.283
LOR loricrin 2.283
RPS27 ribosomal protein S27 2.283
NUP210L nucleoporin 210kDa-like 2.283
CRTC2 CREB regulated transcription coactivator 2 2.283
SV2A synaptic vesicle glycoprotein 2A 2.283
RLF rearranged L-myc fusion 2.283
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3 2.283
DENND4B DENN/MADD domain containing 4B 2.283
MTMR11 myotubularin related protein 11 2.283
SLC39A1 solute carrier family 39 (zinc transporter), member 1 2.283
GATAD2B GATA zinc finger domain containing 2B 2.283
HIST2H2AB histone cluster 2, H2ab 2.283
HIST2H2AC histone cluster 2, H2ac 2.283
CREB3L4 cAMP responsive element binding protein 3-like 4 2.283
SF3B4 splicing factor 3b, subunit 4, 49kDa 2.283
SPRR4 small proline-rich protein 4 2.283
LELP1 late cornified envelope-like proline-rich 1 2.283
SPRR2C small proline-rich protein 2C (pseudogene) 2.283
HIST2H2BE histone cluster 2, H2be 2.283
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 2.283
SPRR2F small proline-rich protein 2F 2.283
BOLA1 bolA family member 1 2.283
SPRR2E small proline-rich protein 2E 2.283
RAB13 RAB13, member RAS oncogene family 2.283
SPRR2B small proline-rich protein 2B 2.283
INTS3 integrator complex subunit 3 2.283
SNORA58 small nucleolar RNA, H/ACA box 58 2.26395
S100A7L2 S100 calcium binding protein A7-like 2 2.26395
S100A4 S100 calcium binding protein A4 2.26395
S100A5 S100 calcium binding protein A5 2.26395
SPRR2A small proline-rich protein 2A 2.26395
S100A7 S100 calcium binding protein A7 2.26395
PGLYRP4 peptidoglycan recognition protein 4 2.26395
PGLYRP3 peptidoglycan recognition protein 3 2.26395
S100A9 S100 calcium binding protein A9 2.26395
S100A8 S100 calcium binding protein A8 2.26395
CHTOP chromatin target of PRMT1 2.26395
S100A16 S100 calcium binding protein A16 2.26395
S100A6 S100 calcium binding protein A6 2.26395
S100A14 S100 calcium binding protein A14 2.26395
S100A7A S100 calcium binding protein A7A 2.26395
S100A12 S100 calcium binding protein A12 2.26395
S100A13 S100 calcium binding protein A13 2.26395
S100A1 S100 calcium binding protein A1 2.26395
SNAPIN SNAP-associated protein 2.26395
NPR1 natriuretic peptide receptor 1 2.26395
S100A2 S100 calcium binding protein A2 2.26395
ILF2 interleukin enhancer binding factor 2 2.26395
S100A3 S100 calcium binding protein A3 2.26395
APH1A APH1A gamma secretase subunit 2.25904
C1ORF54 chromosome 1 open reading frame 54 2.25904
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 2.25904
PLEKHO1 pleckstrin homology domain containing, family O member 1 2.25904
VPS45 vacuolar protein sorting 45 homolog (S. cerevisiae) 2.25904
MFSD2A major facilitator superfamily domain containing 2A 2.25904
CA14 carbonic anhydrase XIV 2.25904
PPIE peptidylprolyl isomerase E (cyclophilin E) 2.24845
RFX5 regulatory factor X, 5 (influences HLA class II expression) 2.24845
SCNM1 sodium channel modifier 1 2.24845
TNFAIP8L2 tumor necrosis factor, alpha-induced protein 8-like 2 2.24845
PRPF3 pre-mRNA processing factor 3 2.24845
BMP8B bone morphogenetic protein 8b 2.24845
OXCT2 3-oxoacid CoA transferase 2 2.24845
SELENBP1 selenium binding protein 1 2.24845
MRPS21 mitochondrial ribosomal protein S21 2.24845
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1 2.24845
TNFAIP8L2-SCNM1 TNFAIP8L2-SCNM1 readthrough 2.24845
PI4KB phosphatidylinositol 4-kinase, catalytic, beta 2.24139
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 2.24139
ZNF687 zinc finger protein 687 2.24139
PSMB4 proteasome (prosome, macropain) subunit, beta type, 4 2.24139
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 2.24139
TMOD4 tropomodulin 4 (muscle) 2.24139
CERS2 ceramide synthase 2 2.24139
POGZ pogo transposable element with ZNF domain 2.24139
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 2.24139
SETDB1 SET domain, bifurcated 1 2.24139
CDC42SE1 CDC42 small effector 1 2.24139
C1ORF56 chromosome 1 open reading frame 56 2.24139
GABPB2 GA binding protein transcription factor, beta subunit 2 2.24139
SEMA6C sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 2.24139
TRIT1 tRNA isopentenyltransferase 1 2.24139
MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 2.24139
ANXA9 annexin A9 2.2355
FAM63A family with sequence similarity 63, member A 2.2355
BNIPL BCL2/adenovirus E1B 19kD interacting protein like 2.2355
PRUNE prune exopolyphosphatase 2.2355
ARNT aryl hydrocarbon receptor nuclear translocator 2.23324
RPRD2 regulation of nuclear pre-mRNA domain containing 2 2.23324
HORMAD1 HORMA domain containing 1 2.23078
ENSA endosulfine alpha 2.23078
FALEC focally amplified long non-coding RNA in epithelial cancer 2.23078
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative) 2.23078
CTSS cathepsin S 2.23078
CTSK cathepsin K 2.23078
ECM1 extracellular matrix protein 1 2.23078
GOLPH3L golgi phosphoprotein 3-like 2.23078
MIR4257 microRNA 4257 2.22917
ADAMTSL4 ADAMTS-like 4 2.22917
MCL1 myeloid cell leukemia 1 2.22917
SCARNA3 small Cajal body-specific RNA 3 2.15316
TNR tenascin R 2.15316
RFWD2 ring finger and WD repeat domain 2, E3 ubiquitin protein ligase 2.15316
PAPPA2 pappalysin 2 2.15316
PACRG PARK2 co-regulated 2.14588
SNORD76 small nucleolar RNA, C/D box 76 2.14311
MRPS14 mitochondrial ribosomal protein S14 2.14311
CACYBP calcyclin binding protein 2.14311
SNORD44 small nucleolar RNA, C/D box 44 2.14311
SNORD79 small nucleolar RNA, C/D box 79 2.14311
SNORD80 small nucleolar RNA, C/D box 80 2.14311
GPR52 G protein-coupled receptor 52 2.14311
GAS5-AS1 GAS5 antisense RNA 1 2.14311
GAS5 growth arrest-specific 5 (non-protein coding) 2.14311
SNORD47 small nucleolar RNA, C/D box 47 2.14311
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1 2.14311
RC3H1 ring finger and CCCH-type domains 1 2.14311
ZBTB37 zinc finger and BTB domain containing 37 2.14311
MIR3119-1 microRNA 3119-1 2.14116
KIAA0040 KIAA0040 2.14116
METTL11B methyltransferase like 11B 2.14116
TNN tenascin N 2.14116
SCYL3 SCY1-like 3 (S. cerevisiae) 2.14116
C1ORF112 chromosome 1 open reading frame 112 2.14116
KIFAP3 kinesin-associated protein 3 2.14116
MIR3119-2 microRNA 3119-2 2.14116
PARK2 parkin RBR E3 ubiquitin protein ligase 2.13739
RABGAP1L RAB GTPase activating protein 1-like 2.13622
SPRY3 sprouty homolog 3 (Drosophila) 2.12931
VAMP7 vesicle-associated membrane protein 7 2.12931
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18 2.12703
PRDX6 peroxiredoxin 6 2.12703
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 2.12703
SLC9C2 solute carrier family 9, member C2 (putative) 2.12703
AGPAT4-IT1 AGPAT4 intronic transcript 1 2.12703
C1ORF105 chromosome 1 open reading frame 105 2.12703
DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2.12703
ASTN1 astrotactin 1 2.12703
LOC100506023 uncharacterized LOC100506023 2.12703
PIGC phosphatidylinositol glycan anchor biosynthesis, class C 2.12703
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 2.12703
CENPL centromere protein L 2.12703
ANKRD45 ankyrin repeat domain 45 2.12703
KLHL20 kelch-like family member 20 2.12703
LOC730159 uncharacterized LOC730159 2.12703
SNORD75 small nucleolar RNA, C/D box 75 2.12484
FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32) 2.12484
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b) 2.12439
FCGR2C Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene) 2.12439
HSPA7 heat shock 70kDa protein 7 (HSP70B) 2.12439
SNORD78 small nucleolar RNA, C/D box 78 2.12439
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a) 2.12225
FASLG Fas ligand (TNF superfamily, member 6) 2.12225
PRRX1 paired related homeobox 1 2.12225
SUCO SUN domain containing ossification factor 2.12225
OR6Y1 olfactory receptor, family 6, subfamily Y, member 1 2.10992
SNORD74 small nucleolar RNA, C/D box 74 2.10607
GBAP1 glucosidase, beta, acid pseudogene 1 2.09431
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 2.09294
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2 2.0925
KIAA0020 KIAA0020 2.0925
VLDLR very low density lipoprotein receptor 2.0925
SNORD81 small nucleolar RNA, C/D box 81 2.09117
KANK1 KN motif and ankyrin repeat domains 1 2.08887
RFX3 regulatory factor X, 3 (influences HLA class II expression) 2.08882
C9ORF66 chromosome 9 open reading frame 66 2.08877
DMRT1 doublesex and mab-3 related transcription factor 1 2.08877
CBWD1 COBW domain containing 1 2.08856
FOXD4 forkhead box D4 2.08839
DOCK8 dedicator of cytokinesis 8 2.0845
TDRD10 tudor domain containing 10 2.08021
LCE1E late cornified envelope 1E 2.07574
LCE1D late cornified envelope 1D 2.0752
SNORD77 small nucleolar RNA, C/D box 77 2.06505

low copy number

Symbol Name Standardized Value
OR4F29 olfactory receptor, family 4, subfamily F, member 29 -5.12655
LOC100132062 uncharacterized LOC100132062 -3.29865
SNORD115-10 small nucleolar RNA, C/D box 115-10 -3.24687
SNORD115-9 small nucleolar RNA, C/D box 115-9 -3.24687
LOC100133331 uncharacterized LOC100133331 -3.14331
LOC729737 uncharacterized LOC729737 -3.11641
SNORD115-8 small nucleolar RNA, C/D box 115-8 -3.11641
SNORD115-7 small nucleolar RNA, C/D box 115-7 -3.11641
SNORD115-6 small nucleolar RNA, C/D box 115-6 -3.11641
OR4F5 olfactory receptor, family 4, subfamily F, member 5 -2.99615
BTNL3 butyrophilin-like 3 -2.72661