NCI-H1838 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: adenocarcinoma; non-small cell lung cancer (Cell Line Ontology, CLO_0008023)
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Genes

94 genes with high or low copy number in NCI-H1838 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
HPVC1 human papillomavirus (type 18) E5 central sequence-like 1 2.22793
VSTM2A V-set and transmembrane domain containing 2A 2.22633
SEC61G Sec61 gamma subunit 2.21727
EGFR-AS1 EGFR antisense RNA 1 2.21096
EGFR epidermal growth factor receptor 2.20309

low copy number

Symbol Name Standardized Value
HAND2 heart and neural crest derivatives expressed 2 -5.12655
MIR4276 microRNA 4276 -5.12655
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) -5.12655
SCRG1 stimulator of chondrogenesis 1 -5.12655
CEP44 centrosomal protein 44kDa -5.12655
HMGB2 high mobility group box 2 -5.12655
SAP30 Sin3A-associated protein, 30kDa -5.12655
GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 -3.83684
FBXO8 F-box protein 8 -3.83684
POTEH POTE ankyrin domain family, member H -3.7119
LRRC4C leucine rich repeat containing 4C -3.39516
OR5AS1 olfactory receptor, family 5, subfamily AS, member 1 -3.38669
OR8I2 olfactory receptor, family 8, subfamily I, member 2 -3.38669
OR4C15 olfactory receptor, family 4, subfamily C, member 15 -3.38669
OR8H2 olfactory receptor, family 8, subfamily H, member 2 -3.38669
OR8K5 olfactory receptor, family 8, subfamily K, member 5 -3.38669
OR4C16 olfactory receptor, family 4, subfamily C, member 16 (gene/pseudogene) -3.38669
OR8H3 olfactory receptor, family 8, subfamily H, member 3 -3.38669
OR8J3 olfactory receptor, family 8, subfamily J, member 3 -3.38669
OR10AG1 olfactory receptor, family 10, subfamily AG, member 1 -3.36169
TRIM51 tripartite motif-containing 51 -3.36169
OR5L1 olfactory receptor, family 5, subfamily L, member 1 (gene/pseudogene) -3.36169
OR5I1 olfactory receptor, family 5, subfamily I, member 1 -3.36169
OR8U8 olfactory receptor, family 8, subfamily U, member 8 -3.36169
OR9G4 olfactory receptor, family 9, subfamily G, member 4 -3.36169
OR5L2 olfactory receptor, family 5, subfamily L, member 2 -3.36169
OR5F1 olfactory receptor, family 5, subfamily F, member 1 -3.36169
OR9G9 olfactory receptor, family 9, subfamily G, member 9 -3.36169
OR5D16 olfactory receptor, family 5, subfamily D, member 16 -3.36169
OR7E5P olfactory receptor, family 7, subfamily E, member 5 pseudogene -3.36169
OR5D13 olfactory receptor, family 5, subfamily D, member 13 (gene/pseudogene) -3.36169
OR5D18 olfactory receptor, family 5, subfamily D, member 18 -3.36169
OR4A15 olfactory receptor, family 4, subfamily A, member 15 -3.36169
OR4A16 olfactory receptor, family 4, subfamily A, member 16 -3.36169
OR5W2 olfactory receptor, family 5, subfamily W, member 2 -3.36169
OR5D14 olfactory receptor, family 5, subfamily D, member 14 -3.36169
OR5M10 olfactory receptor, family 5, subfamily M, member 10 -3.32901
OR5M1 olfactory receptor, family 5, subfamily M, member 1 -3.32901
OR5M3 olfactory receptor, family 5, subfamily M, member 3 -3.32901
OR5M9 olfactory receptor, family 5, subfamily M, member 9 -3.32901
OR5M8 olfactory receptor, family 5, subfamily M, member 8 -3.32901
OR5AR1 olfactory receptor, family 5, subfamily AR, member 1 (gene/pseudogene) -3.32901
LOC100507205 uncharacterized LOC100507205 -3.32901
OR5M11 olfactory receptor, family 5, subfamily M, member 11 -3.32901
OR5R1 olfactory receptor, family 5, subfamily R, member 1 (gene/pseudogene) -3.32901
OR8H1 olfactory receptor, family 8, subfamily H, member 1 -3.32901
ASTN2 astrotactin 2 -3.32901
OR8J1 olfactory receptor, family 8, subfamily J, member 1 -3.32901
OR8K3 olfactory receptor, family 8, subfamily K, member 3 (gene/pseudogene) -3.32901
OR8K1 olfactory receptor, family 8, subfamily K, member 1 -3.32901
OR5AP2 olfactory receptor, family 5, subfamily AP, member 2 -3.32901
OR5T2 olfactory receptor, family 5, subfamily T, member 2 -3.32901
OR5T3 olfactory receptor, family 5, subfamily T, member 3 -3.32901
OR5T1 olfactory receptor, family 5, subfamily T, member 1 -3.32901
OR4C46 olfactory receptor, family 4, subfamily C, member 46 -3.29865
OR4A5 olfactory receptor, family 4, subfamily A, member 5 -3.29865
SNORD32B small nucleolar RNA, C/D box 32B -3.2703
HNRNPKP3 heterogeneous nuclear ribonucleoprotein K pseudogene 3 -3.24687
MIR129-2 microRNA 129-2 -3.24687
TTC17 tetratricopeptide repeat domain 17 -3.24687
API5 apoptosis inhibitor 5 -3.24687
GLRA3 glycine receptor, alpha 3 -3.24687
MIR670 microRNA 670 -3.24687
OR5J2 olfactory receptor, family 5, subfamily J, member 2 -3.16503
TRIM51HP tripartite motif-containing 51H, pseudogene -3.15836
TRIM48 tripartite motif containing 48 -3.15179
LPP LIM domain containing preferred translocation partner in lipoma -3.09172
PWRN2 Prader-Willi region non-protein coding RNA 2 -3.03592
OR4C11 olfactory receptor, family 4, subfamily C, member 11 -2.98179
MIR876 microRNA 876 -2.84034
MIR873 microRNA 873 -2.83605
C9ORF72 chromosome 9 open reading frame 72 -2.83538
IFNK interferon, kappa -2.83538
EQTN equatorin, sperm acrosome associated -2.83167
MOB3B MOB kinase activator 3B -2.83114
LINC00032 long intergenic non-protein coding RNA 32 -2.82909
LRRC19 leucine rich repeat containing 19 -2.82668
CAAP1 caspase activity and apoptosis inhibitor 1 -2.82318
TEK TEK tyrosine kinase, endothelial -2.82318
PLAA phospholipase A2-activating protein -2.82318
IFT74 intraflagellar transport 74 -2.82083
AMY1A amylase, alpha 1A (salivary) -2.81685
AMY2A amylase, alpha 2A (pancreatic) -2.81685
LINGO2 leucine rich repeat and Ig domain containing 2 -2.79933
LOC100506422 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -2.79871
TUSC1 tumor suppressor candidate 1 -2.78941
IZUMO3 IZUMO family member 3 -2.77409
ELAVL2 ELAV like neuron-specific RNA binding protein 2 -2.74526
CES1P1 carboxylesterase 1 pseudogene 1 -2.74485