NCI-H1792 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: adenocarcinoma (lung primary) (Cell Line Ontology, CLO_0008019)
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Genes

356 genes with high or low copy number in NCI-H1792 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
MIR5192 microRNA 5192 4.51153
TMEM17 transmembrane protein 17 4.51153
MIR4432 microRNA 4432 4.51153
ATXN7L3B ataxin 7-like 3B 4.51153
KCNC2 potassium channel, voltage gated Shaw related subfamily C, member 2 4.51153
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) 4.51153
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 4.51153
CCT4 chaperonin containing TCP1, subunit 4 (delta) 4.51153
FAM161A family with sequence similarity 161, member A 4.51153
COMMD1 copper metabolism (Murr1) domain containing 1 4.51153
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 3.12177
FLJ12825 uncharacterized LOC440101 3.12177
KIAA1841 KIAA1841 3.12177
MIR148B microRNA 148b 3.12177
ATP5G2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) 3.12177
SP1 Sp1 transcription factor 3.12177
UGP2 UDP-glucose pyrophosphorylase 2 3.12177
LOC100652999 uncharacterized LOC100652999 3.12177
PELI1 pellino E3 ubiquitin protein ligase 1 3.12177
AFTPH aftiphilin 3.12177
LGALSL lectin, galactoside-binding-like 3.12177
COPZ1 coatomer protein complex, subunit zeta 1 3.12177
CBX5 chromobox homolog 5 3.12177
MIR3198-2 microRNA 3198-2 3.12177
LOC100240734 uncharacterized LOC100240734 3.12177
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 3.12177
C2ORF74 chromosome 2 open reading frame 74 3.12177
HOXC5 homeobox C5 3.12177
LOC100132215 uncharacterized LOC100132215 3.12177
TARBP2 TAR (HIV-1) RNA binding protein 2 3.12177
HOXC4 homeobox C4 3.12177
HOXC6 homeobox C6 3.12177
AMHR2 anti-Mullerian hormone receptor, type II 3.12177
PCBP2 poly(rC) binding protein 2 3.12177
OTX1 orthodenticle homeobox 1 3.12177
MIR615 microRNA 615 3.12177
WDPCP WD repeat containing planar cell polarity effector 3.12177
LINC00309 long intergenic non-protein coding RNA 309 3.12177
NPFF neuropeptide FF-amide peptide precursor 3.12177
NFE2 nuclear factor, erythroid 2 3.12177
LOC339803 uncharacterized LOC339803 3.12177
HOXC8 homeobox C8 3.12177
LOC100240735 uncharacterized LOC100240735 3.12177
ATF7 activating transcription factor 7 3.12177
MIR4778 microRNA 4778 3.12177
LOC400043 uncharacterized LOC400043 3.12177
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 3.12177
PRR13 proline rich 13 3.12177
MIR4434 microRNA 4434 3.12177
MEIS1-AS3 MEIS1 antisense RNA 3 3.12177
PEX13 peroxisomal biogenesis factor 13 3.12177
SP7 Sp7 transcription factor 3.12177
CALCOCO1 calcium binding and coiled-coil domain 1 3.12177
DBIL5P2 diazepam binding inhibitor-like 5 pseudogene 2 3.12177
AAAS achalasia, adrenocortical insufficiency, alacrimia 3.12177
EHBP1 EH domain binding protein 1 3.12177
MAP3K12 mitogen-activated protein kinase kinase kinase 12 3.12177
MDH1 malate dehydrogenase 1, NAD (soluble) 3.12177
HOXC9 homeobox C9 2.93899
XPO1 exportin 1 2.93899
REL v-rel avian reticuloendotheliosis viral oncogene homolog 2.93899
CAPS2 calcyphosine 2 2.93899
HOXC12 homeobox C12 2.93899
GLIPR1L1 GLI pathogenesis-related 1 like 1 2.93899
MEIS1 Meis homeobox 1 2.93899
USP34 ubiquitin specific peptidase 34 2.93899
GLIPR1 GLI pathogenesis-related 1 2.93899
PUS10 pseudouridylate synthase 10 2.93899
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 2.93899
PSMA8 proteasome (prosome, macropain) subunit, alpha type, 8 2.93899
LOC339807 uncharacterized LOC339807 2.93899
FLJ16124 2.93899
SNORA70B small nucleolar RNA, H/ACA box 70B 2.93899
LOC400958 uncharacterized LOC400958 2.93899
SERTAD2 SERTA domain containing 2 2.93899
MMD monocyte to macrophage differentiation-associated 2.93899
GLIPR1L2 GLI pathogenesis-related 1 like 2 2.93899
HOXC10 homeobox C10 2.93899
SS18 synovial sarcoma translocation, chromosome 18 2.93899
TMEM100 transmembrane protein 100 2.93899
SPRED2 sprouty-related, EVH1 domain containing 2 2.93899
HOXC13 homeobox C13 2.93899
CEP68 centrosomal protein 68kDa 2.93899
PAPOLG poly(A) polymerase gamma 2.93899
RAB1A RAB1A, member RAS oncogene family 2.93899
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 2.93899
LOC100507377 uncharacterized LOC100507377 2.93899
DCLK2 doublecortin-like kinase 2 2.93899
AHSA2 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) 2.93899
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 2.93899
TAF4B TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa 2.93899
LEMD3 LEM domain containing 3 2.93899
MIR196A2 microRNA 196a-2 2.93899
HOTAIR HOX transcript antisense RNA 2.93899
HOXC11 homeobox C11 2.93899
LOC375196 uncharacterized LOC375196 2.76305
OR5AK2 olfactory receptor, family 5, subfamily AK, member 2 2.76305
HLF hepatic leukemia factor 2.76305
OR5AK4P olfactory receptor, family 5, subfamily AK, member 4 pseudogene 2.76305
ARHGEF33 Rho guanine nucleotide exchange factor (GEF) 33 2.76305
SOS1 son of sevenless homolog 1 (Drosophila) 2.76305
MSRB3 methionine sulfoxide reductase B3 2.64759
PARP8 poly (ADP-ribose) polymerase family, member 8 2.64759
EIF3B eukaryotic translation initiation factor 3, subunit B 2.59653
INTS1 integrator complex subunit 1 2.59653
LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 2.59653
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K 2.59653
TMEM184A transmembrane protein 184A 2.59653
NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 2.59653
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 2.59653
SNX8 sorting nexin 8 2.59653
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 2.59653
MICALL2 MICAL-like 2 2.59653
IQCE IQ motif containing E 2.59653
MIR4655 microRNA 4655 2.59653
GNA12 guanine nucleotide binding protein (G protein) alpha 12 2.59653
PSMG3-AS1 PSMG3 antisense RNA 1 (head to head) 2.59653
CLEC6A C-type lectin domain family 6, member A 2.59653
LINC00937 long intergenic non-protein coding RNA 937 2.59653
PSMG3 proteasome (prosome, macropain) assembly chaperone 3 2.59653
MIR4648 microRNA 4648 2.59653
CLEC4D C-type lectin domain family 4, member D 2.59653
TTYH3 tweety family member 3 2.59653
AMZ1 archaelysin family metallopeptidase 1 2.59653
ZFAND2A zinc finger, AN1-type domain 2A 2.59653
LOC401296 uncharacterized LOC401296 2.59653
BRAT1 BRCA1-associated ATM activator 1 2.59653
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 2.59653
TFAMP1 transcription factor A, mitochondrial pseudogene 1 2.59653
STXBP4 syntaxin binding protein 4 2.59653
CHST12 carbohydrate (chondroitin 4) sulfotransferase 12 2.59653
UNCX UNC homeobox 2.59653
ADAP1 ArfGAP with dual PH domains 1 2.49065
C7ORF50 chromosome 7 open reading frame 50 2.49065
DNAAF5 dynein, axonemal, assembly factor 5 2.49065
INHBC inhibin, beta C 2.49065
GET4 golgi to ER traffic protein 4 homolog (S. cerevisiae) 2.49065
COX19 COX19 cytochrome c oxidase assembly factor 2.49065
MIR339 microRNA 339 2.49065
GPR146 G protein-coupled receptor 146 2.49065
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1 2.49065
SUN1 Sad1 and UNC84 domain containing 1 2.49065
INHBE inhibin, beta E 2.44392
ARHGAP9 Rho GTPase activating protein 9 2.44392
GLI1 GLI family zinc finger 1 2.44392
RBM4 RNA binding motif protein 4 2.41451
DDIT3 DNA-damage-inducible transcript 3 2.41451
RBM4B RNA binding motif protein 4B 2.41451
SPTBN2 spectrin, beta, non-erythrocytic 2 2.41451
MARS methionyl-tRNA synthetase 2.41451
RBM14-RBM4 RBM14-RBM4 readthrough 2.41451
MBD6 methyl-CpG binding domain protein 6 2.41451
SYT12 synaptotagmin XII 2.39327
XRCC6BP1 XRCC6 binding protein 1 2.39327
LRFN4 leucine rich repeat and fibronectin type III domain containing 4 2.39327
PC pyruvate carboxylase 2.39327
C11ORF80 chromosome 11 open reading frame 80 2.39327
C11ORF86 chromosome 11 open reading frame 86 2.39327
RCE1 Ras converting CAAX endopeptidase 1 2.39327
DCTN2 dynactin 2 (p50) 2.39327
RHOD ras homolog family member D 2.39327
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 2.36889
ALDH3B2 aldehyde dehydrogenase 3 family, member B2 2.36889
RAD9A RAD9 homolog A (S. pombe) 2.36889
ADRBK1 adrenergic, beta, receptor kinase 1 2.36889
ANKRD13D ankyrin repeat domain 13 family, member D 2.36889
POLD4 polymerase (DNA-directed), delta 4, accessory subunit 2.36889
LOC100506844 uncharacterized LOC100506844 2.36889
LOC100130987 uncharacterized LOC100130987 2.36889
TBC1D10C TBC1 domain family, member 10C 2.36889
SSH3 slingshot protein phosphatase 3 2.36889
CLCF1 cardiotrophin-like cytokine factor 1 2.36889
NUDT8 nudix (nucleoside diphosphate linked moiety X)-type motif 8 2.35236
CORO1B coronin, actin binding protein, 1B 2.35236
DOC2GP double C2-like domains, gamma, pseudogene 2.35236
GPR152 G protein-coupled receptor 152 2.35236
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 2.35236
KDM2A lysine (K)-specific demethylase 2A 2.35236
CABP2 calcium binding protein 2 2.35236
AIP aryl hydrocarbon receptor interacting protein 2.35236
PTPRCAP protein tyrosine phosphatase, receptor type, C-associated protein 2.35236
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2 2.35236
ACY3 aminoacylase 3 2.35236
CABP4 calcium binding protein 4 2.35236
CARNS1 carnosine synthase 1 2.35236
TBX10 T-box 10 2.35236
TMEM134 transmembrane protein 134 2.35236
PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 2.35236
GSTP1 glutathione S-transferase pi 1 2.3178
MIR26A2 microRNA 26a-2 2.3178
CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 2.3178
METTL21B methyltransferase like 21B 2.3178
C11ORF72 chromosome 11 open reading frame 72 2.3178
NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 2.3178
DTX3 deltex 3, E3 ubiquitin ligase 2.30944
METTL1 methyltransferase like 1 2.30944
MARCH9 membrane-associated ring finger (C3HC4) 9 2.30944
TSFM Ts translation elongation factor, mitochondrial 2.30944
PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 2.30944
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1 2.30944
AVIL advillin 2.30944
FOXA1 forkhead box A1 2.283
AGAP2-AS1 AGAP2 antisense RNA 1 2.283
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 2.283
ARHGEF25 Rho guanine nucleotide exchange factor (GEF) 25 2.283
TSPAN31 tetraspanin 31 2.283
HEATR5A HEAT repeat containing 5A 2.283
CDK4 cyclin-dependent kinase 4 2.283
AKAP6 A kinase (PRKA) anchor protein 6 2.283
DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2.283
SLC26A10 solute carrier family 26, member 10 2.283
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 2.283
GPR33 G protein-coupled receptor 33 (gene/pseudogene) 2.283
ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head) 2.26395
TTC6 tetratricopeptide repeat domain 6 2.26395
ARHGAP5 Rho GTPase activating protein 5 2.26395
NUBPL nucleotide binding protein-like 2.26395
SLC25A21-AS1 SLC25A21 antisense RNA 1 2.25904
MIPOL1 mirror-image polydactyly 1 2.25904
SLC25A21 solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 2.2355
ANO1 anoctamin 1, calcium activated chloride channel 2.16307
VRK2 vaccinia related kinase 2 2.15316
FANCL Fanconi anemia, complementation group L 2.15316
CLEC3A C-type lectin domain family 3, member A 2.14116
VAT1L vesicle amine transport 1-like 2.14116
WWOX WW domain containing oxidoreductase 2.13663
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 2.12931
OR4A5 olfactory receptor, family 4, subfamily A, member 5 2.12703
OR4C46 olfactory receptor, family 4, subfamily C, member 46 2.12703
ZNF521 zinc finger protein 521 2.12703
TRIM48 tripartite motif containing 48 2.12439
OR5T2 olfactory receptor, family 5, subfamily T, member 2 2.12225
OR5R1 olfactory receptor, family 5, subfamily R, member 1 (gene/pseudogene) 2.12225
OR8J1 olfactory receptor, family 8, subfamily J, member 1 2.12225
OR5M1 olfactory receptor, family 5, subfamily M, member 1 2.12225
OR5M3 olfactory receptor, family 5, subfamily M, member 3 2.12225
OR5M8 olfactory receptor, family 5, subfamily M, member 8 2.12225
AQP4 aquaporin 4 2.12225
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 2.12225
OR5T1 olfactory receptor, family 5, subfamily T, member 1 2.12225
OR5T3 olfactory receptor, family 5, subfamily T, member 3 2.12225
OR5M9 olfactory receptor, family 5, subfamily M, member 9 2.12225
OR5AP2 olfactory receptor, family 5, subfamily AP, member 2 2.12225
AQP4-AS1 AQP4 antisense RNA 1 2.12225
OR5AR1 olfactory receptor, family 5, subfamily AR, member 1 (gene/pseudogene) 2.12225
OR8K3 olfactory receptor, family 8, subfamily K, member 3 (gene/pseudogene) 2.12225
OR8K1 olfactory receptor, family 8, subfamily K, member 1 2.12225
KCTD1 potassium channel tetramerization domain containing 1 2.12225
OR5M10 olfactory receptor, family 5, subfamily M, member 10 2.12225
OR5M11 olfactory receptor, family 5, subfamily M, member 11 2.12225
OR8H1 olfactory receptor, family 8, subfamily H, member 1 2.12225
OR4C11 olfactory receptor, family 4, subfamily C, member 11 2.11467
TRIM51HP tripartite motif-containing 51H, pseudogene 2.11167
OR5D16 olfactory receptor, family 5, subfamily D, member 16 2.10992
A2M-AS1 A2M antisense RNA 1 (head to head) 2.10992
OR4A16 olfactory receptor, family 4, subfamily A, member 16 2.10992
KLRG1 killer cell lectin-like receptor subfamily G, member 1 2.10992
OR4A15 olfactory receptor, family 4, subfamily A, member 15 2.10992
OR10AG1 olfactory receptor, family 10, subfamily AG, member 1 2.10992
OR9G4 olfactory receptor, family 9, subfamily G, member 4 2.10992
OR5W2 olfactory receptor, family 5, subfamily W, member 2 2.10992
OR5D14 olfactory receptor, family 5, subfamily D, member 14 2.10992
OR5D13 olfactory receptor, family 5, subfamily D, member 13 (gene/pseudogene) 2.10992
OR5D18 olfactory receptor, family 5, subfamily D, member 18 2.10992
EMB embigin 2.10992
RIMKLB ribosomal modification protein rimK-like family member B 2.10992
M6PR mannose-6-phosphate receptor (cation dependent) 2.10992
OR5L1 olfactory receptor, family 5, subfamily L, member 1 (gene/pseudogene) 2.10992
OR9G9 olfactory receptor, family 9, subfamily G, member 9 2.10992
OR7E5P olfactory receptor, family 7, subfamily E, member 5 pseudogene 2.10992
OR5L2 olfactory receptor, family 5, subfamily L, member 2 2.10992
A2M alpha-2-macroglobulin 2.10992
PHC1 polyhomeotic homolog 1 (Drosophila) 2.10992
OR5F1 olfactory receptor, family 5, subfamily F, member 1 2.10992
OR5I1 olfactory receptor, family 5, subfamily I, member 1 2.10992
OR8U8 olfactory receptor, family 8, subfamily U, member 8 2.10992
LINC00612 long intergenic non-protein coding RNA 612 2.10992
TRIM51 tripartite motif-containing 51 2.10992
A2ML1 alpha-2-macroglobulin-like 1 2.10992
OR5J2 olfactory receptor, family 5, subfamily J, member 2 2.10177
MFAP5 microfibrillar associated protein 5 2.10038
OR4C16 olfactory receptor, family 4, subfamily C, member 16 (gene/pseudogene) 2.10038
CLEC4E C-type lectin domain family 4, member E 2.10038
OR8J3 olfactory receptor, family 8, subfamily J, member 3 2.10038
AICDA activation-induced cytidine deaminase 2.10038
CARD11 caspase recruitment domain family, member 11 2.10038
OR4C15 olfactory receptor, family 4, subfamily C, member 15 2.10038
OR8I2 olfactory receptor, family 8, subfamily I, member 2 2.10038
OR5AS1 olfactory receptor, family 5, subfamily AS, member 1 2.10038
OR8K5 olfactory receptor, family 8, subfamily K, member 5 2.10038
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 2.10038
OR8H2 olfactory receptor, family 8, subfamily H, member 2 2.10038
OR8H3 olfactory receptor, family 8, subfamily H, member 3 2.10038
PDGFA platelet-derived growth factor alpha polypeptide 2.09431
LOC442497 uncharacterized LOC442497 2.09431
FLJ44511 uncharacterized LOC441307 2.09431
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta 2.09431
FAM20C family with sequence similarity 20, member C 2.09431
SNORD81 small nucleolar RNA, C/D box 81 2.09117
R3HDM2 R3H domain containing 2 2.09073
SDK1 sidekick cell adhesion molecule 1 2.08334
FAM86C2P family with sequence similarity 86, member A pseudogene 2.07822
KIF5A kinesin family member 5A 2.07776
MIR1206 microRNA 1206 2.07612
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 2.0731
NPAS3 neuronal PAS domain protein 3 2.0731
MIR1208 microRNA 1208 2.07136
MIR1205 microRNA 1205 2.07136
MIR1207 microRNA 1207 2.07136
TMEM75 transmembrane protein 75 2.06401
MIR1204 microRNA 1204 2.04661
PVT1 Pvt1 oncogene (non-protein coding) 2.04585

low copy number

Symbol Name Standardized Value
ZIC3 Zic family member 3 -3.61078
LOC339593 uncharacterized LOC339593 -3.32901
PRNT prion protein (testis specific) -3.29865
PRNP prion protein -3.29865
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -3.29865
PRND prion protein 2 (dublet) -3.29865
RIN2 Ras and Rab interactor 2 -3.29865
PAX1 paired box 1 -3.29865
LOC100130264 uncharacterized LOC100130264 -3.2703
LINC00652 long intergenic non-protein coding RNA 652 -3.2703
LOC100270804 uncharacterized LOC100270804 -3.2703
SCP2D1 SCP2 sterol-binding domain containing 1 -3.2703
C20ORF78 chromosome 20 open reading frame 78 -3.2703
DTD1 D-tyrosyl-tRNA deacylase 1 -3.2703
LOC284788 uncharacterized LOC284788 -3.17926
SLX4IP SLX4 interacting protein -3.15179
JAG1 jagged 1 -3.15179
MIR3156-3 microRNA 3156-3 -3.03592
TMPRSS15 transmembrane protease, serine 15 -2.94975
CHODL chondrolectin -2.94975
SAMSN1 SAM domain, SH3 domain and nuclear localization signals 1 -2.92126
USP25 ubiquitin specific peptidase 25 -2.91868
C21ORF91 chromosome 21 open reading frame 91 -2.91612
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene -2.91612
MIRLET7C microRNA let-7c -2.91612
MIR99A microRNA 99a -2.91612
ANKRD20A11P ankyrin repeat domain 20 family, member A11, pseudogene -2.91612
POTED POTE ankyrin domain family, member D -2.91612
BTG3 BTG family, member 3 -2.91612
C21ORF91-OT1 C21orf91 overlapping transcript 1 -2.91612
HSPA13 heat shock protein 70kDa family, member 13 -2.91612
CHODL-AS1 CHODL antisense RNA 1 -2.91612
MIR125B2 microRNA 125b-2 -2.91612
RBM11 RNA binding motif protein 11 -2.91268
SAMSN1-AS1 SAMSN1 antisense RNA 1 -2.89373
LOC388813 uncharacterized protein ENSP00000383407-like -2.89373
CXADR coxsackie virus and adenovirus receptor -2.89201
LINC01549 long intergenic non-protein coding RNA 1549 -2.89201
LIPI lipase, member I -2.88947
NRIP1 nuclear receptor interacting protein 1 -2.8792
SNORD74 small nucleolar RNA, C/D box 74 -2.86885
OR52N5 olfactory receptor, family 52, subfamily N, member 5 -2.84224
CCSER1 coiled-coil serine-rich protein 1 -2.82606
OR52N1 olfactory receptor, family 52, subfamily N, member 1 -2.73524