NCI-H1693 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: adenocarcinoma; non-small cell lung cancer (lung primary) (Cell Line Ontology, CLO_0008012)
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Genes

85 genes with high or low copy number in NCI-H1693 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
FMNL1 formin-like 1 4.51153
MAP3K14 mitogen-activated protein kinase kinase kinase 14 3.12177
MAP3K14-AS1 MAP3K14 antisense RNA 1 3.12177
SPATA32 spermatogenesis associated 32 3.12177
KIF2B kinesin family member 2B 2.49065
C17ORF112 chromosome 17 open reading frame 112 2.44392
LINC00895 long intergenic non-protein coding RNA 895 2.44392
GNB1L guanine nucleotide binding protein (G protein), beta polypeptide 1-like 2.41451
SEPT5-GP1BB SEPT5-GP1BB readthrough 2.41451
TBX1 T-box 1 2.41451
C22ORF29 chromosome 22 open reading frame 29 2.41451
MIR4761 microRNA 4761 2.39327
TANGO2 transport and golgi organization 2 homolog (Drosophila) 2.39327
LOC388849 uncharacterized LOC388849 2.39327
LINC00896 long intergenic non-protein coding RNA 896 2.39327
MIR1286 microRNA 1286 2.39327
LOC284865 uncharacterized LOC284865 2.39327
COMT catechol-O-methyltransferase 2.39327
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome 2.39327
RTN4R reticulon 4 receptor 2.39327
TXNRD2 thioredoxin reductase 2 2.39327
MIR185 microRNA 185 2.39327
RAPGEFL1 Rap guanine nucleotide exchange factor (GEF)-like 1 2.36889
MIR3618 microRNA 3618 2.36889
ZDHHC8 zinc finger, DHHC-type containing 8 2.36889
TMEM191C transmembrane protein 191C 2.36889
MSL1 male-specific lethal 1 homolog (Drosophila) 2.36889
RIMBP3 RIMS binding protein 3 2.36889
PI4KAP2 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 2 2.36889
USP41 ubiquitin specific peptidase 41 2.36889
MIR1306 microRNA 1306 2.36889
TMEM191B transmembrane protein 191B 2.36889
WIPF2 WAS/WASL interacting protein family, member 2 2.36889
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1 2.36889
RANBP1 RAN binding protein 1 2.36889
DGCR8 DGCR8 microprocessor complex subunit 2.36889
DGCR6L DiGeorge syndrome critical region gene 6-like 2.36889
TRMT2A tRNA methyltransferase 2 homolog A (S. cerevisiae) 2.36889
RIMBP3C RIMS binding protein 3C 2.35236
CASC3 cancer susceptibility candidate 3 2.35236
POM121L8P POM121 transmembrane nucleoporin-like 8 pseudogene 2.35236
HIC2 hypermethylated in cancer 2 2.35236
GGT2 gamma-glutamyltransferase 2 2.3178
POM121L7 POM121 transmembrane nucleoporin-like 7 2.3178
ZNF74 zinc finger protein 74 2.3178
NR1D1 nuclear receptor subfamily 1, group D, member 1 2.3178
SCARF2 scavenger receptor class F, member 2 2.30944
BCRP2 breakpoint cluster region pseudogene 2 2.30944
KLHL22 kelch-like family member 22 2.30944
MED15 mediator complex subunit 15 2.30944
SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 2.283
SLC7A4 solute carrier family 7, member 4 2.283
P2RX6P purinergic receptor P2X, ligand gated ion channel, 6 pseudogene 2.283
POM121L4P POM121 transmembrane nucleoporin-like 4 pseudogene 2.283
SNAP29 synaptosomal-associated protein, 29kDa 2.283
TMEM191A transmembrane protein 191A (pseudogene) 2.283
PI4KA phosphatidylinositol 4-kinase, catalytic, alpha 2.283
P2RX6 purinergic receptor P2X, ligand gated ion channel, 6 2.26395
THRA thyroid hormone receptor, alpha 2.26395
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like 2.26395
LZTR1 leucine-zipper-like transcription regulator 1 2.26395
THAP7-AS1 THAP7 antisense RNA 1 2.26395
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3 2.26395
THAP7 THAP domain containing 7 2.26395
TUBA3FP tubulin, alpha 3f, pseudogene 2.26395
MED24 mediator complex subunit 24 2.24845
CSF3 colony stimulating factor 3 (granulocyte) 2.24845
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 2.24845
SNORD124 small nucleolar RNA, C/D box 124 2.24845
LRRC3C leucine rich repeat containing 3C 2.23324
GSDMA gasdermin A 2.23324
ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 2.23078
GSDMB gasdermin B 2.22793
ZPBP2 zona pellucida binding protein 2 2.22291
IKZF3 IKAROS family zinc finger 3 (Aiolos) 2.19863
ADGRL3 adhesion G protein-coupled receptor L3 2.15316
C12ORF40 chromosome 12 open reading frame 40 2.09529
ABCD2 ATP-binding cassette, sub-family D (ALD), member 2 2.09529
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 2.09117
PDZRN4 PDZ domain containing ring finger 4 2.09073
LRRK2 leucine-rich repeat kinase 2 2.08781
CNTN1 contactin 1 2.08334
MUC19 mucin 19, oligomeric 2.08066
BCR breakpoint cluster region 2.0722

low copy number

Symbol Name Standardized Value
FFAR3 free fatty acid receptor 3 -2.76158