NCI-H1688 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: carcinoma; classic small cell lung cancer (Cell Line Ontology, CLO_0008011)
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Genes

50 genes with high or low copy number in NCI-H1688 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value

low copy number

Symbol Name Standardized Value
FAM155A family with sequence similarity 155, member A -3.38669
ITM2B integral membrane protein 2B -3.11641
PCDH19 protocadherin 19 -3.03592
PSG1 pregnancy specific beta-1-glycoprotein 1 -2.98179
PSG3 pregnancy specific beta-1-glycoprotein 3 -2.98179
PSG7 pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene) -2.98179
PSG10P pregnancy specific beta-1-glycoprotein 10, pseudogene -2.98179
LOC643486 -2.969
XRCC6P5 X-ray repair complementing defective repair in Chinese hamster cells 6 pseudogene 5 -2.9644
PSG11 pregnancy specific beta-1-glycoprotein 11 -2.95508
LOC100289650 uncharacterized LOC100289650 -2.94975
CHM choroideremia (Rab escort protein 1) -2.94448
NAP1L3 nucleosome assembly protein 1-like 3 -2.93929
PCDH11X protocadherin 11 X-linked -2.93929
SAMSN1 SAM domain, SH3 domain and nuclear localization signals 1 -2.92126
USP25 ubiquitin specific peptidase 25 -2.91868
ZNF711 zinc finger protein 711 -2.91868
POF1B premature ovarian failure, 1B -2.91868
TGIF2LX TGFB-induced factor homeobox 2-like, X-linked -2.91868
DACH2 dachshund family transcription factor 2 -2.91868
RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6 -2.91612
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene -2.91612
MIRLET7C microRNA let-7c -2.91612
MIR99A microRNA 99a -2.91612
FAM133A family with sequence similarity 133, member A -2.91612
UBE2DNL ubiquitin-conjugating enzyme E2D N-terminal like (pseudogene) -2.91612
MIR125B2 microRNA 125b-2 -2.91612
SATL1 spermidine/spermine N1-acetyl transferase-like 1 -2.91612
HSPA13 heat shock protein 70kDa family, member 13 -2.91612
LINC00441 long intergenic non-protein coding RNA 441 -2.91268
RBM11 RNA binding motif protein 11 -2.91268
SAMSN1-AS1 SAMSN1 antisense RNA 1 -2.89373
LOC388813 uncharacterized protein ENSP00000383407-like -2.89373
HDX highly divergent homeobox -2.89302
CPXCR1 CPX chromosome region, candidate 1 -2.89302
PABPC5 poly(A) binding protein, cytoplasmic 5 -2.89302
CYLC1 cylicin, basic protein of sperm head cytoskeleton 1 -2.89201
APOOL apolipoprotein O-like -2.89201
LINC01549 long intergenic non-protein coding RNA 1549 -2.89201
CXADR coxsackie virus and adenovirus receptor -2.89201
KLHL4 kelch-like family member 4 -2.89201
LIPI lipase, member I -2.88947
NRIP1 nuclear receptor interacting protein 1 -2.8792
SNORD74 small nucleolar RNA, C/D box 74 -2.86885
RPA4 replication protein A4, 30kDa -2.86559
TPTE transmembrane phosphatase with tensin homology -2.86003
PSG6 pregnancy specific beta-1-glycoprotein 6 -2.84243
RB1 retinoblastoma 1 -2.83092
DIAPH2 diaphanous-related formin 2 -2.82214
BTNL3 butyrophilin-like 3 -2.72661