NCI-H1299 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Similar Terms
Downloads & Tools

Genes

309 genes with high or low expression in NCI-H1299 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
TDRD12 tudor domain containing 12 3.06661
CDCA4 cell division cycle associated 4 2.86445
ERF Ets2 repressor factor 2.65563
SERTAD3 SERTA domain containing 3 2.57278
FLJ11292 2.51287
RPP21 ribonuclease P/MRP 21kDa subunit 2.47986
MCRS1 microspherule protein 1 2.31944
FTCD formimidoyltransferase cyclodeaminase 2.31047
GUF1 GUF1 GTPase homolog (S. cerevisiae) 2.29926
ISYNA1 inositol-3-phosphate synthase 1 2.26014
CSPP1 centrosome and spindle pole associated protein 1 2.24919
MARK3 MAP/microtubule affinity-regulating kinase 3 2.21216
PRDM13 PR domain containing 13 2.15079
OGFOD2 2-oxoglutarate and iron-dependent oxygenase domain containing 2 2.06165
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 2.05895
DPEP3 dipeptidase 3 2.00282
BBS10 Bardet-Biedl syndrome 10 1.99676
MTFR1 mitochondrial fission regulator 1 1.996
CRH corticotropin releasing hormone 1.97166
ARMC1 armadillo repeat containing 1 1.92029
EGLN2 egl-9 family hypoxia-inducible factor 2 1.92017
DOHH deoxyhypusine hydroxylase/monooxygenase 1.91962
CAPNS1 calpain, small subunit 1 1.9103
EMG1 EMG1 N1-specific pseudouridine methyltransferase 1.90281
TARBP2 TAR (HIV-1) RNA binding protein 2 1.89407
POLR2D polymerase (RNA) II (DNA directed) polypeptide D 1.89208
EIF6 eukaryotic translation initiation factor 6 1.87884
TWF1 twinfilin actin binding protein 1 1.83757
MAPKAP1 mitogen-activated protein kinase associated protein 1 1.8278
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 1.81949
ZNF45 zinc finger protein 45 1.81669
MYL4 myosin, light chain 4, alkali; atrial, embryonic 1.80039
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 1.79353
UBE2K ubiquitin-conjugating enzyme E2K 1.78551
GAGE3 G antigen 3 1.7759
RFWD3 ring finger and WD repeat domain 3 1.77341
PTGER1 prostaglandin E receptor 1 (subtype EP1), 42kDa 1.7607
PRKDC protein kinase, DNA-activated, catalytic polypeptide 1.751
PDS5A PDS5 cohesin associated factor A 1.74478
FKBPL FK506 binding protein like 1.74198
DEPDC1 DEP domain containing 1 1.74082
MTO1 mitochondrial tRNA translation optimization 1 1.73916
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 1.73452
ATXN3 ataxin 3 1.73251
TBP TATA box binding protein 1.72538
SPATS2 spermatogenesis associated, serine-rich 2 1.7252
TEAD4 TEA domain family member 4 1.71857
FBXO17 F-box protein 17 1.716
PDCD2 programmed cell death 2 1.70891
POMT2 protein-O-mannosyltransferase 2 1.69096
DZIP3 DAZ interacting zinc finger protein 3 1.6777
DENR density-regulated protein 1.66793
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3 1.66532
DXO decapping exoribonuclease 1.64417
MAP3K14 mitogen-activated protein kinase kinase kinase 14 1.64033
WDR62 WD repeat domain 62 1.63169
BUD31 BUD31 homolog (S. cerevisiae) 1.62949
LIN37 lin-37 DREAM MuvB core complex component 1.62723
GAGE7 G antigen 7 1.62083
DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 1.62047
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 1.61355
SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 1.61209
FAM50B family with sequence similarity 50, member B 1.60846
MTIF2 mitochondrial translational initiation factor 2 1.6038
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 1.59492
NXF2 nuclear RNA export factor 2 1.59481
ZNF696 zinc finger protein 696 1.59187
R3HDM1 R3H domain containing 1 1.58969
RECQL RecQ helicase-like 1.58333
SIVA1 SIVA1, apoptosis-inducing factor 1.58207
TBCB tubulin folding cofactor B 1.5817
TFB1M transcription factor B1, mitochondrial 1.57308
GABRA4 gamma-aminobutyric acid (GABA) A receptor, alpha 4 1.57121
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 1.56133
RPP40 ribonuclease P/MRP 40kDa subunit 1.55979
CUL7 cullin 7 1.55925
STAG3 stromal antigen 3 1.55533
NCOA2 nuclear receptor coactivator 2 1.55444
CDC34 cell division cycle 34 1.54552
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13 1.54263
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 1.54094
SENP6 SUMO1/sentrin specific peptidase 6 1.54015
FUS FUS RNA binding protein 1.53974
LIAS lipoic acid synthetase 1.53746
RMDN1 regulator of microtubule dynamics 1 1.52796
SPDL1 spindle apparatus coiled-coil protein 1 1.52617
LRRC23 leucine rich repeat containing 23 1.52556
DHODH dihydroorotate dehydrogenase (quinone) 1.52102
RUVBL1 RuvB-like AAA ATPase 1 1.51166
USP5 ubiquitin specific peptidase 5 (isopeptidase T) 1.49866
LMNB2 lamin B2 1.49497
SNX16 sorting nexin 16 1.48956
TMEM33 transmembrane protein 33 1.48409
VPS52 vacuolar protein sorting 52 homolog (S. cerevisiae) 1.48296
SDCCAG3 serologically defined colon cancer antigen 3 1.4631
COPS5 COP9 signalosome subunit 5 1.46158
AGO1 argonaute RISC catalytic component 1 1.45805
RPL23AP7 ribosomal protein L23a pseudogene 7 1.45768
SNF8 SNF8, ESCRT-II complex subunit 1.45643
IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 1.45159
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 1.45143
PHB prohibitin 1.43168
SGTA small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha 1.427
ORC3 origin recognition complex, subunit 3 1.42413

low expression

Symbol Name Standardized Value
UBE2E1 ubiquitin-conjugating enzyme E2E 1 -3.53725
SIK1 salt-inducible kinase 1 -3.31047
S100A6 S100 calcium binding protein A6 -2.77828
CD4 CD4 molecule -2.59821
TRANK1 tetratricopeptide repeat and ankyrin repeat containing 1 -2.53716
STAT5A signal transducer and activator of transcription 5A -2.43403
LGALS8 lectin, galactoside-binding, soluble, 8 -2.43039
TFAP2B transcription factor AP-2 beta (activating enhancer binding protein 2 beta) -2.42196
CCL7 chemokine (C-C motif) ligand 7 -2.38263
GYG2 glycogenin 2 -2.3698
GFRA3 GDNF family receptor alpha 3 -2.36718
CARD14 caspase recruitment domain family, member 14 -2.34434
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B -2.28505
LRRTM2 leucine rich repeat transmembrane neuronal 2 -2.2822
TRH thyrotropin-releasing hormone -2.2378
SLC15A1 solute carrier family 15 (oligopeptide transporter), member 1 -2.22675
UPK2 uroplakin 2 -2.19562
AREG amphiregulin -2.16988
ZSCAN16 zinc finger and SCAN domain containing 16 -2.15346
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 -2.12835
HLA-DRB4 major histocompatibility complex, class II, DR beta 4 -2.11971
MARCH1 membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase -2.10513
OGFR opioid growth factor receptor -2.09898
C2 complement component 2 -2.09775
APOL3 apolipoprotein L, 3 -2.08127
IFI16 interferon, gamma-inducible protein 16 -2.08035
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 -2.0607
HTR6 5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled -2.01047
TBX6 T-box 6 -2.00567
LCK LCK proto-oncogene, Src family tyrosine kinase -1.98206
WNT11 wingless-type MMTV integration site family, member 11 -1.98145
STXBP6 syntaxin binding protein 6 (amisyn) -1.97885
MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow -1.97782
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 -1.97457
CASC1 cancer susceptibility candidate 1 -1.96569
ADCY2 adenylate cyclase 2 (brain) -1.96499
DGKG diacylglycerol kinase, gamma 90kDa -1.96453
FUT2 fucosyltransferase 2 (secretor status included) -1.96388
HYAL4 hyaluronoglucosaminidase 4 -1.96161
GSTA1 glutathione S-transferase alpha 1 -1.955
GKN1 gastrokine 1 -1.93625
APOA1 apolipoprotein A-I -1.93316
B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 -1.93121
GIF gastric intrinsic factor (vitamin B synthesis) -1.91619
RNF39 ring finger protein 39 -1.90913
BMX BMX non-receptor tyrosine kinase -1.90616
RPE65 retinal pigment epithelium-specific protein 65kDa -1.89964
GP6 glycoprotein VI (platelet) -1.89652
DUSP4 dual specificity phosphatase 4 -1.88852
CD27 CD27 molecule -1.88658
NRXN3 neurexin 3 -1.88035
MAGEB3 melanoma antigen family B3 -1.87952
MNX1 motor neuron and pancreas homeobox 1 -1.87267
GGT1 gamma-glutamyltransferase 1 -1.87214
PCYT1B phosphate cytidylyltransferase 1, choline, beta -1.87104
DHRS9 dehydrogenase/reductase (SDR family) member 9 -1.86703
GRIP2 glutamate receptor interacting protein 2 -1.86326
INSL5 insulin-like 5 -1.85965
ALDH3A1 aldehyde dehydrogenase 3 family, member A1 -1.84266
HNMT histamine N-methyltransferase -1.84206
CETP cholesteryl ester transfer protein, plasma -1.83015
MYBPC3 myosin binding protein C, cardiac -1.82656
ZNF223 zinc finger protein 223 -1.82008
ALLC allantoicase -1.80762
AKR1C3 aldo-keto reductase family 1, member C3 -1.80237
EPX eosinophil peroxidase -1.78881
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -1.78813
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -1.78042
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa -1.77189
ITGB7 integrin, beta 7 -1.7521
SMR3B submaxillary gland androgen regulated protein 3B -1.75086
ADGRD2 adhesion G protein-coupled receptor D2 -1.75037
ARF1 ADP-ribosylation factor 1 -1.7266
HSPA6 heat shock 70kDa protein 6 (HSP70B') -1.7249
TMEM40 transmembrane protein 40 -1.7197
VPREB3 pre-B lymphocyte 3 -1.71778
PPIF peptidylprolyl isomerase F -1.71744
MSRB2 methionine sulfoxide reductase B2 -1.71504
TNS4 tensin 4 -1.71275
EBI3 Epstein-Barr virus induced 3 -1.69457
TEX13A testis expressed 13A -1.69404
VGLL1 vestigial-like family member 1 -1.68959
OVGP1 oviductal glycoprotein 1, 120kDa -1.68805
NEIL1 nei endonuclease VIII-like 1 (E. coli) -1.68344
ZNF133 zinc finger protein 133 -1.66614
HIST2H2AA3 histone cluster 2, H2aa3 -1.66105
APOBR apolipoprotein B receptor -1.66057
NYX nyctalopin -1.65839
PRM1 protamine 1 -1.65798
PLXDC1 plexin domain containing 1 -1.65512
CALML3 calmodulin-like 3 -1.65032
MGST2 microsomal glutathione S-transferase 2 -1.64983
CACNG3 calcium channel, voltage-dependent, gamma subunit 3 -1.64531
IFNA8 interferon, alpha 8 -1.64344
FEZF2 FEZ family zinc finger 2 -1.63448
LMOD1 leiomodin 1 (smooth muscle) -1.63022
MUSK muscle, skeletal, receptor tyrosine kinase -1.62794
COL4A6 collagen, type IV, alpha 6 -1.62325
SCGB1D2 secretoglobin, family 1D, member 2 -1.62125
HIST1H4L histone cluster 1, H4l -1.61929
ACKR3 atypical chemokine receptor 3 -1.61376
ARAF A-Raf proto-oncogene, serine/threonine kinase -1.61343
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5 -1.60925
MORC1 MORC family CW-type zinc finger 1 -1.60826
APOA4 apolipoprotein A-IV -1.60624
CD2 CD2 molecule -1.60555
PTCH2 patched 2 -1.60424
ELSPBP1 epididymal sperm binding protein 1 -1.60219
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) -1.6004
DAPK1 death-associated protein kinase 1 -1.59802
CREG1 cellular repressor of E1A-stimulated genes 1 -1.59759
CTSS cathepsin S -1.59717
MAN1C1 mannosidase, alpha, class 1C, member 1 -1.59706
COL4A1 collagen, type IV, alpha 1 -1.59475
CLCN4 chloride channel, voltage-sensitive 4 -1.59322
SPO11 SPO11 meiotic protein covalently bound to DSB -1.59193
CNR2 cannabinoid receptor 2 (macrophage) -1.59156
CALCB calcitonin-related polypeptide beta -1.58789
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) -1.58631
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1 -1.5862
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 -1.58509
SERHL2 serine hydrolase-like 2 -1.58429
SFTPB surfactant protein B -1.5816
STX12 syntaxin 12 -1.58132
ZNF205 zinc finger protein 205 -1.57899
GPR4 G protein-coupled receptor 4 -1.57864
EMCN endomucin -1.57249
ADAM30 ADAM metallopeptidase domain 30 -1.57037
GDAP1L1 ganglioside induced differentiation associated protein 1-like 1 -1.56895
TXNIP thioredoxin interacting protein -1.56588
PKP1 plakophilin 1 -1.56071
HUS1 HUS1 checkpoint homolog (S. pombe) -1.55996
BCO1 beta-carotene oxygenase 1 -1.55817
MYL10 myosin, light chain 10, regulatory -1.55606
TMPRSS11D transmembrane protease, serine 11D -1.55518
PARD6B par-6 family cell polarity regulator beta -1.55459
AFF3 AF4/FMR2 family, member 3 -1.55279
PTGIR prostaglandin I2 (prostacyclin) receptor (IP) -1.55095
CD93 CD93 molecule -1.5474
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -1.54685
EPN1 epsin 1 -1.54408
WFDC8 WAP four-disulfide core domain 8 -1.5434
ZC3H11A zinc finger CCCH-type containing 11A -1.53892
KCNE5 potassium channel, voltage gated subfamily E regulatory beta subunit 5 -1.53735
CRYAB crystallin, alpha B -1.53572
CRYBB1 crystallin, beta B1 -1.53081
KCNA10 potassium channel, voltage gated shaker related subfamily A, member 10 -1.52967
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 -1.52848
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 -1.52549
CALCRL calcitonin receptor-like -1.52338
PRL prolactin -1.52154
ZBTB33 zinc finger and BTB domain containing 33 -1.51594
CLDN17 claudin 17 -1.51471
PRKCG protein kinase C, gamma -1.51385
MAB21L2 mab-21-like 2 (C. elegans) -1.51231
KCNK1 potassium channel, two pore domain subfamily K, member 1 -1.51198
VAMP5 vesicle-associated membrane protein 5 -1.51048
APOL1 apolipoprotein L, 1 -1.5099
NRP2 neuropilin 2 -1.50911
C1S complement component 1, s subcomponent -1.50502
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) -1.50095
OR1A1 olfactory receptor, family 1, subfamily A, member 1 -1.49663
CD46 CD46 molecule, complement regulatory protein -1.49275
TRAF3IP2 TRAF3 interacting protein 2 -1.49192
CDH18 cadherin 18, type 2 -1.4887
CWF19L1 CWF19-like 1, cell cycle control (S. pombe) -1.48774
TMEM184C transmembrane protein 184C -1.48221
SLCO1C1 solute carrier organic anion transporter family, member 1C1 -1.47826
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2 -1.47773
KIAA1462 KIAA1462 -1.47628
CAMK1G calcium/calmodulin-dependent protein kinase IG -1.47467
CHIT1 chitinase 1 (chitotriosidase) -1.4738
HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 -1.4709
DRD1 dopamine receptor D1 -1.46795
GFM1 G elongation factor, mitochondrial 1 -1.46685
HBD hemoglobin, delta -1.4644
CASR calcium-sensing receptor -1.46289
CYP4F3 cytochrome P450, family 4, subfamily F, polypeptide 3 -1.46195
MYD88 myeloid differentiation primary response 88 -1.45993
CHL1 cell adhesion molecule L1-like -1.45828
ELANE elastase, neutrophil expressed -1.45413
PTPRB protein tyrosine phosphatase, receptor type, B -1.45397
COG2 component of oligomeric golgi complex 2 -1.4503
KCNJ16 potassium channel, inwardly rectifying subfamily J, member 16 -1.45001
LPL lipoprotein lipase -1.44997
AP4E1 adaptor-related protein complex 4, epsilon 1 subunit -1.44674
GPR37L1 G protein-coupled receptor 37 like 1 -1.44417
TLX3 T-cell leukemia homeobox 3 -1.44381
CNGB1 cyclic nucleotide gated channel beta 1 -1.44335
MX2 MX dynamin-like GTPase 2 -1.44319
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 -1.44269
FLJ20712 uncharacterized FLJ20712 -1.44188
GIPC2 GIPC PDZ domain containing family, member 2 -1.44004
HAO1 hydroxyacid oxidase (glycolate oxidase) 1 -1.43977
TEX14 testis expressed 14 -1.43753
ANKFY1 ankyrin repeat and FYVE domain containing 1 -1.43727
TRPC7 transient receptor potential cation channel, subfamily C, member 7 -1.43478
LOC57399 uncharacterized gastric protein ZA52P -1.4337
ADAMDEC1 ADAM-like, decysin 1 -1.43162
SYTL2 synaptotagmin-like 2 -1.43087
COL10A1 collagen, type X, alpha 1 -1.42974
MYOM1 myomesin 1 -1.42299
CDH1 cadherin 1, type 1, E-cadherin (epithelial) -1.42282
UBQLN3 ubiquilin 3 -1.4206
SCIN scinderin -1.41917