Lymphoma Gene Set

Dataset HuGE Navigator Gene-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A hematologic cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs. (Human Disease Ontology, DOID_0060058)
Similar Terms
Downloads & Tools

Genes

127 genes associated with the Lymphoma phenotype by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
APOE apolipoprotein E
ATM ATM serine/threonine kinase
BMF Bcl2 modifying factor
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
CBS cystathionine-beta-synthase
CCL5 chemokine (C-C motif) ligand 5
CCR2 chemokine (C-C motif) receptor 2
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD14 CD14 molecule
CD38 CD38 molecule
CD5 CD5 molecule
CPA4 carboxypeptidase A4
CPT2 carnitine palmitoyltransferase 2
CX3CR1 chemokine (C-X3-C motif) receptor 1
CXCL12 chemokine (C-X-C motif) ligand 12
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5
DHFR dihydrofolate reductase
ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ERCC5 excision repair cross-complementation group 5
ERCC6 excision repair cross-complementation group 6
ESPL1 extra spindle pole bodies homolog 1 (S. cerevisiae)
FAS Fas cell surface death receptor
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
FHL5 four and a half LIM domains 5
FN1 fibronectin 1
FOXN1 forkhead box N1
GSTM1 glutathione S-transferase mu 1
GSTP1 glutathione S-transferase pi 1
GSTT1 glutathione S-transferase theta 1
GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa
HFE hemochromatosis
HIPK4 homeodomain interacting protein kinase 4
HLA-A major histocompatibility complex, class I, A
HLA-B major histocompatibility complex, class I, B
HLA-C major histocompatibility complex, class I, C
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
IFNG interferon, gamma
IL10 interleukin 10
IL10RA interleukin 10 receptor, alpha
IL12A interleukin 12A
IL12RB1 interleukin 12 receptor, beta 1
IL16 interleukin 16
IL18 interleukin 18
IL19 interleukin 19
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL1RN interleukin 1 receptor antagonist
IL2 interleukin 2
IL4 interleukin 4
IL4R interleukin 4 receptor
IL6 interleukin 6
IL6R interleukin 6 receptor
INHBC inhibin, beta C
IRF4 interferon regulatory factor 4
JAK2 Janus kinase 2
JAK3 Janus kinase 3
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KRT1 keratin 1, type II
LAMA2 laminin, alpha 2
LILRA4 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4
LRP2 low density lipoprotein receptor-related protein 2
LRP4 low density lipoprotein receptor-related protein 4
MC4R melanocortin 4 receptor
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MGMT O-6-methylguanine-DNA methyltransferase
MMP10 matrix metallopeptidase 10
MPO myeloperoxidase
MSH2 mutS homolog 2
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MYD88 myeloid differentiation primary response 88
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase)
NBN nibrin
NOD2 nucleotide-binding oligomerization domain containing 2
NQO1 NAD(P)H dehydrogenase, quinone 1
NR1I2 nuclear receptor subfamily 1, group I, member 2
POLB polymerase (DNA directed), beta
PON1 paraoxonase 1
RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)
RFC1 replication factor C (activator 1) 1, 145kDa
SEC23B Sec23 homolog B (S. cerevisiae)
SH2D1A SH2 domain containing 1A
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SLC19A1 solute carrier family 19 (folate transporter), member 1
SOCS1 suppressor of cytokine signaling 1
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT5A signal transducer and activator of transcription 5A
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced
TCN2 transcobalamin II
THBS1 thrombospondin 1
TLR1 toll-like receptor 1
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TLR5 toll-like receptor 5
TLR9 toll-like receptor 9
TNF tumor necrosis factor
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TOPBP1 topoisomerase (DNA) II binding protein 1
TP53 tumor protein p53
TYMS thymidylate synthetase
TYR tyrosinase
UGT1A1 UDP glucuronosyltransferase 1 family, polypeptide A1
USP47 ubiquitin specific peptidase 47
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3
ZNF169 zinc finger protein 169
ZNF527 zinc finger protein 527