Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HJ-01A-11R-A26W-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Lung squamous cell carcinoma_LUSC (The Cancer Genome Atlas)
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Genes

398 genes with high or low expression in Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HJ-01A-11R-A26W-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9
ABI2 abl-interactor 2
ACACB acetyl-CoA carboxylase beta
ACADSB acyl-CoA dehydrogenase, short/branched chain
ACBD7 acyl-CoA binding domain containing 7
ACO1 aconitase 1, soluble
ACSL4 acyl-CoA synthetase long-chain family member 4
ACSM5 acyl-CoA synthetase medium-chain family member 5
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ADAD2 adenosine deaminase domain containing 2
ADCY6 adenylate cyclase 6
ADGRE4P adhesion G protein-coupled receptor E4, pseudogene
AGO4 argonaute RISC catalytic component 4
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4
AK5 adenylate kinase 5
ALPK3 alpha-kinase 3
ALS2CR11 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11
AMICA1 adhesion molecule, interacts with CXADR antigen 1
AMY2B amylase, alpha 2B (pancreatic)
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
ANXA1 annexin A1
ANXA2P3 annexin A2 pseudogene 3
APAF1 apoptotic peptidase activating factor 1
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2
APOC1 apolipoprotein C-I
APOL3 apolipoprotein L, 3
ARGLU1 arginine and glutamate rich 1
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
ARX aristaless related homeobox
ASCL2 achaete-scute family bHLH transcription factor 2
ATP11C ATPase, class VI, type 11C
ATP5EP2 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
ATP8B5P ATPase, class I, type 8B, member 5, pseudogene
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
BAZ2B bromodomain adjacent to zinc finger domain, 2B
BEND7 BEN domain containing 7
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BRICD5 BRICHOS domain containing 5
BTF3L4 basic transcription factor 3-like 4
C11ORF21 chromosome 11 open reading frame 21
C15ORF43 chromosome 15 open reading frame 43
C15ORF53 chromosome 15 open reading frame 53
C1ORF123 chromosome 1 open reading frame 123
C1ORF162 chromosome 1 open reading frame 162
C1ORF216 chromosome 1 open reading frame 216
C1QA complement component 1, q subcomponent, A chain
C1QB complement component 1, q subcomponent, B chain
C2ORF80 chromosome 2 open reading frame 80
C3ORF62 chromosome 3 open reading frame 62
C5ORF56 chromosome 5 open reading frame 56
C6ORF132 chromosome 6 open reading frame 132
C9ORF139 chromosome 9 open reading frame 139
CALCOCO1 calcium binding and coiled-coil domain 1
CALHM1 calcium homeostasis modulator 1
CAPN13 calpain 13
CAPN3 calpain 3, (p94)
CASP12 caspase 12 (gene/pseudogene)
CASP8AP2 caspase 8 associated protein 2
CBWD5 COBW domain containing 5
CCDC112 coiled-coil domain containing 112
CCDC115 coiled-coil domain containing 115
CCDC129 coiled-coil domain containing 129
CCDC66 coiled-coil domain containing 66
CCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)
CCNJ cyclin J
CD274 CD274 molecule
CD52 CD52 molecule
CEACAM21 carcinoembryonic antigen-related cell adhesion molecule 21
CEACAM4 carcinoembryonic antigen-related cell adhesion molecule 4
CEP57L1 centrosomal protein 57kDa-like 1
CHAD chondroadherin
CIB2 calcium and integrin binding family member 2
CIB4 calcium and integrin binding family member 4
CIT citron rho-interacting serine/threonine kinase
CLDN23 claudin 23
CLDND2 claudin domain containing 2
CLEC10A C-type lectin domain family 10, member A
CLEC4GP1 C-type lectin domain family 4, member G pseudogene 1
CLK2P1 CDC-like kinase 2, pseudogene 1
CMAHP cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
CNTLN centlein, centrosomal protein
COL2A1 collagen, type II, alpha 1
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)
COLCA2 colorectal cancer associated 2
CRIP1 cysteine-rich protein 1 (intestinal)
CTSZ cathepsin Z
CXCR4 chemokine (C-X-C motif) receptor 4
CYP1B1-AS1 CYP1B1 antisense RNA 1
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
CYP4B1 cytochrome P450, family 4, subfamily B, polypeptide 1
DAPK2 death-associated protein kinase 2
DCLK2 doublecortin-like kinase 2
DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
DENND4C DENN/MADD domain containing 4C
DLEU2L deleted in lymphocytic leukemia 2-like
DLEU7 deleted in lymphocytic leukemia, 7
DLG3 discs, large homolog 3 (Drosophila)
DNAJC5B DnaJ (Hsp40) homolog, subfamily C, member 5 beta
DNASE2B deoxyribonuclease II beta
DNTT DNA nucleotidylexotransferase
DOK7 docking protein 7
DPCR1 diffuse panbronchiolitis critical region 1
DPEP2 dipeptidase 2
EFHD1 EF-hand domain family, member D1
EGFL7 EGF-like-domain, multiple 7
EPB41L5 erythrocyte membrane protein band 4.1 like 5
EXOSC9 exosome component 9
EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit
FABP9 fatty acid binding protein 9, testis
FADS2 fatty acid desaturase 2
FAM111A family with sequence similarity 111, member A
FAM117A family with sequence similarity 117, member A
FAM131B family with sequence similarity 131, member B
FAM162B family with sequence similarity 162, member B
FAM170B family with sequence similarity 170, member B
FAM184A family with sequence similarity 184, member A
FAM19A1 family with sequence similarity 19 (chemokine (C-C motif)-like), member A1
FAM209A family with sequence similarity 209, member A
FAM225A family with sequence similarity 225, member A (non-protein coding)
FAM8A1 family with sequence similarity 8, member A1
FCGR1B Fc fragment of IgG, high affinity Ib, receptor (CD64)
FCGR1C Fc fragment of IgG, high affinity Ic, receptor (CD64), pseudogene
FCRL6 Fc receptor-like 6
FIGF c-fos induced growth factor (vascular endothelial growth factor D)
FLJ10038 uncharacterized protein FLJ10038
FLJ12825 uncharacterized LOC440101
FLJ34503 uncharacterized FLJ34503
FLJ44635 TPT1-like protein
FMNL2 formin-like 2
FNBP1L formin binding protein 1-like
FOXI1 forkhead box I1
FOXN4 forkhead box N4
FRG1 FSHD region gene 1
GAB2 GRB2-associated binding protein 2
GAB3 GRB2-associated binding protein 3
GGTLC1 gamma-glutamyltransferase light chain 1
GJC3 gap junction protein, gamma 3, 30.2kDa
GLCCI1 glucocorticoid induced 1
GMPR guanosine monophosphate reductase
GNG4 guanine nucleotide binding protein (G protein), gamma 4
GOLGA2P5 golgin A2 pseudogene 5
GPRIN2 G protein regulated inducer of neurite outgrowth 2
GRIPAP1 GRIP1 associated protein 1
GUCA1B guanylate cyclase activator 1B (retina)
GUSBP3 glucuronidase, beta pseudogene 3
GYPE glycophorin E (MNS blood group)
GZMH granzyme H (cathepsin G-like 2, protein h-CCPX)
GZMK granzyme K (granzyme 3; tryptase II)
HCG26 HLA complex group 26 (non-protein coding)
HCG27 HLA complex group 27 (non-protein coding)
HEPACAM2 HEPACAM family member 2
HLA-DMA major histocompatibility complex, class II, DM alpha
HLA-DQA2 major histocompatibility complex, class II, DQ alpha 2
HLA-DRB6 major histocompatibility complex, class II, DR beta 6 (pseudogene)
HLA-J major histocompatibility complex, class I, J (pseudogene)
HMG20A high mobility group 20A
HMGB2 high mobility group box 2
HMX2 H6 family homeobox 2
HMX3 H6 family homeobox 3
HOTAIR HOX transcript antisense RNA
HOXC10 homeobox C10
HOXC11 homeobox C11
HOXC12 homeobox C12
HOXC4 homeobox C4
HOXC5 homeobox C5
HOXC6 homeobox C6
HOXC9 homeobox C9
HP1BP3 heterochromatin protein 1, binding protein 3
HPYR1 Helicobacter pylori responsive 1 (non-protein coding)
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
HTR3E 5-hydroxytryptamine (serotonin) receptor 3E, ionotropic
HTRA4 HtrA serine peptidase 4
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
IFFO1 intermediate filament family orphan 1
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
IL12A interleukin 12A
IL37 interleukin 37
IL3RA interleukin 3 receptor, alpha (low affinity)
IPCEF1 interaction protein for cytohesin exchange factors 1
IRS2 insulin receptor substrate 2
ISL1 ISL LIM homeobox 1
ITGB1BP2 integrin beta 1 binding protein (melusin) 2
KCNG4 potassium channel, voltage gated modifier subfamily G, member 4
KCNK17 potassium channel, two pore domain subfamily K, member 17
KIF15 kinesin family member 15
KIF4B kinesin family member 4B
KIF5C kinesin family member 5C
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3
KIR2DS4 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4
KIR3DL2 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KLHL2 kelch-like family member 2
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KLRK1 killer cell lectin-like receptor subfamily K, member 1
L3MBTL4 l(3)mbt-like 4 (Drosophila)
LARP7 La ribonucleoprotein domain family, member 7
LEFTY2 left-right determination factor 2
LINC00264 long intergenic non-protein coding RNA 264
LINC00515 long intergenic non-protein coding RNA 515
LOC100132831 A20-binding inhibitor of NF-kappaB activation 2 pseudogene
LOC100240735 uncharacterized LOC100240735
LOC339568 uncharacterized LOC339568
LOC388692 uncharacterized LOC388692
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LOC649330
LRRC36 leucine rich repeat containing 36
LRRC37A2 leucine rich repeat containing 37, member A2
LRRC74A leucine rich repeat containing 74A
LRRN3 leucine rich repeat neuronal 3
LY86 lymphocyte antigen 86
MAGOH mago-nashi homolog, proliferation-associated (Drosophila)
MARCO macrophage receptor with collagenous structure
MAST2 microtubule associated serine/threonine kinase 2
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MCTP2 multiple C2 domains, transmembrane 2
MEX3A mex-3 RNA binding family member A
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MLXIP MLX interacting protein
MOGAT1 monoacylglycerol O-acyltransferase 1
MPDZ multiple PDZ domain protein
MPHOSPH9 M-phase phosphoprotein 9
MROH8 maestro heat-like repeat family member 8
MRPS10 mitochondrial ribosomal protein S10
MS4A14 membrane-spanning 4-domains, subfamily A, member 14
MS4A7 membrane-spanning 4-domains, subfamily A, member 7
MTF2 metal response element binding transcription factor 2
MTMR9LP myotubularin related protein 9-like, pseudogene
MYB v-myb avian myeloblastosis viral oncogene homolog
MYO1H myosin IH
MYO6 myosin VI
NACA2 nascent polypeptide-associated complex alpha subunit 2
NASP nuclear autoantigenic sperm protein (histone-binding)
NBPF14 neuroblastoma breakpoint family, member 14
NEK3 NIMA-related kinase 3
NFAM1 NFAT activating protein with ITAM motif 1
NFYB nuclear transcription factor Y, beta
NPEPL1 aminopeptidase-like 1
NPFF neuropeptide FF-amide peptide precursor
NR2C1 nuclear receptor subfamily 2, group C, member 1
NUP210L nucleoporin 210kDa-like
NUSAP1 nucleolar and spindle associated protein 1
NXF1 nuclear RNA export factor 1
OR10J3 olfactory receptor, family 10, subfamily J, member 3
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR56B1 olfactory receptor, family 56, subfamily B, member 1
ORMDL1 ORMDL sphingolipid biosynthesis regulator 1
PACSIN1 protein kinase C and casein kinase substrate in neurons 1
PALM3 paralemmin 3
PAQR9 progestin and adipoQ receptor family member IX
PARP6 poly (ADP-ribose) polymerase family, member 6
PARVG parvin, gamma
PATE3 prostate and testis expressed 3
PATL2 protein associated with topoisomerase II homolog 2 (yeast)
PAX8 paired box 8
PCDHA3 protocadherin alpha 3
PDE4C phosphodiesterase 4C, cAMP-specific
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PDE6G phosphodiesterase 6G, cGMP-specific, rod, gamma
PEBP1 phosphatidylethanolamine binding protein 1
PEX5L peroxisomal biogenesis factor 5-like
PIN1P1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta
PIP5K1P1 phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1
PIPOX pipecolic acid oxidase
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2
PKD2L1 polycystic kidney disease 2-like 1
PMEL premelanosome protein
PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
PNISR PNN-interacting serine/arginine-rich protein
PNOC prepronociceptin
POU2F3 POU class 2 homeobox 3
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A
PRC1 protein regulator of cytokinesis 1
PRG3 proteoglycan 3
PROCA1 protein interacting with cyclin A1
PRPF38B pre-mRNA processing factor 38B
PRTG protogenin
PSIP1 PC4 and SFRS1 interacting protein 1
PSRC1 proline/serine-rich coiled-coil 1
PTGDR prostaglandin D2 receptor (DP)
PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived)
PTPRJ protein tyrosine phosphatase, receptor type, J
PTPRT protein tyrosine phosphatase, receptor type, T
PTTG2 pituitary tumor-transforming 2
PTTG3P pituitary tumor-transforming 3, pseudogene
RAB41 RAB41, member RAS oncogene family
RACGAP1 Rac GTPase activating protein 1
RACGAP1P Rac GTPase activating protein 1 pseudogene
RAD17 RAD17 homolog (S. pombe)
RASSF4 Ras association (RalGDS/AF-6) domain family member 4
RBM38 RNA binding motif protein 38
RBM5 RNA binding motif protein 5
RDH5 retinol dehydrogenase 5 (11-cis/9-cis)
REC8 REC8 meiotic recombination protein
RGL3 ral guanine nucleotide dissociation stimulator-like 3
RGN regucalcin
RHEBL1 Ras homolog enriched in brain like 1
RHPN2 rhophilin, Rho GTPase binding protein 2
RIC8B RIC8 guanine nucleotide exchange factor B
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RNF183 ring finger protein 183
RNPC3 RNA-binding region (RNP1, RRM) containing 3
RPL13AP17 ribosomal protein L13a pseudogene 17
RPL19P12 ribosomal protein L19 pseudogene 12
RPL31P11 ribosomal protein L31 pseudogene 11
RSRC2 arginine/serine-rich coiled-coil 2
RTKN2 rhotekin 2
S100G S100 calcium binding protein G
S100PBP S100P binding protein
SAG S-antigen; retina and pineal gland (arrestin)
SAMD3 sterile alpha motif domain containing 3
SAP30 Sin3A-associated protein, 30kDa
SARNP SAP domain containing ribonucleoprotein
SCAPER S-phase cyclin A-associated protein in the ER
SCGB3A2 secretoglobin, family 3A, member 2
SCN1A sodium channel, voltage gated, type I alpha subunit
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SH2D4B SH2 domain containing 4B
SH2D6 SH2 domain containing 6
SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene)
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SLC25A27 solute carrier family 25, member 27
SLC25A30 solute carrier family 25, member 30
SLC25A35 solute carrier family 25, member 35
SLC26A8 solute carrier family 26 (anion exchanger), member 8
SLC28A1 solute carrier family 28 (concentrative nucleoside transporter), member 1
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7
SLFN13 schlafen family member 13
SLFNL1 schlafen-like 1
SMTNL1 smoothelin-like 1
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa
SNORA11 small nucleolar RNA, H/ACA box 11
SNORA65 small nucleolar RNA, H/ACA box 65
SNRNP35 small nuclear ribonucleoprotein 35kDa (U11/U12)
SNX22 sorting nexin 22
SPACA5 sperm acrosome associated 5
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1
ST7-OT3 ST7 overlapping transcript 3
STAC3 SH3 and cysteine rich domain 3
STAT1 signal transducer and activator of transcription 1, 91kDa
STH saitohin
STIL SCL/TAL1 interrupting locus
STX3 syntaxin 3
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
SULT1A2 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2
SYCN syncollin
SYF2 SYF2 pre-mRNA-splicing factor
SYNJ2 synaptojanin 2
SYT11 synaptotagmin XI
TAF1L TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like
THSD1P1 thrombospondin, type I, domain containing 1 pseudogene 1
TMCO2 transmembrane and coiled-coil domains 2
TMEM108 transmembrane protein 108
TMEM74B transmembrane protein 74B
TMSB4Y thymosin beta 4, Y-linked
TNFSF12-TNFSF13 TNFSF12-TNFSF13 readthrough
TNRC6C trinucleotide repeat containing 6C
TRERF1 transcriptional regulating factor 1
TRHR thyrotropin-releasing hormone receptor
TRIM58 tripartite motif containing 58
TSC1 tuberous sclerosis 1
TSN translin
TSPAN32 tetraspanin 32
TSSK3 testis-specific serine kinase 3
TTC32 tetratricopeptide repeat domain 32
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
TUBA1A tubulin, alpha 1a
TUBA1B tubulin, alpha 1b
UBA7 ubiquitin-like modifier activating enzyme 7
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UBE2U ubiquitin-conjugating enzyme E2U (putative)
UBXN11 UBX domain protein 11
ULK4P2 ULK4 pseudogene 2
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
VIP vasoactive intestinal peptide
WDR6 WD repeat domain 6
WSB1 WD repeat and SOCS box containing 1
YPEL4 yippee-like 4 (Drosophila)
ZCCHC8 zinc finger, CCHC domain containing 8
ZMYND15 zinc finger, MYND-type containing 15
ZNF208 zinc finger protein 208
ZNF26 zinc finger protein 26
ZNF382 zinc finger protein 382
ZNF418 zinc finger protein 418
ZNF664 zinc finger protein 664
ZNF679 zinc finger protein 679
ZNF69 zinc finger protein 69
ZNF763 zinc finger protein 763
ZNF84 zinc finger protein 84
ZNF99 zinc finger protein 99
ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2