Lung squamous cell carcinoma_LUSC_TCGA-77-A5G8-01B-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Lung squamous cell carcinoma_LUSC (The Cancer Genome Atlas)
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Genes

289 genes with high or low expression in Lung squamous cell carcinoma_LUSC_TCGA-77-A5G8-01B-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A4GNT alpha-1,4-N-acetylglucosaminyltransferase
ABCA13 ATP-binding cassette, sub-family A (ABC1), member 13
ACBD6 acyl-CoA binding domain containing 6
ADM adrenomedullin
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3
ALKBH6 alkB, alkylation repair homolog 6 (E. coli)
ANKRD16 ankyrin repeat domain 16
ANKRD26 ankyrin repeat domain 26
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
ARL8A ADP-ribosylation factor-like 8A
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa
ARR3 arrestin 3, retinal (X-arrestin)
ASB13 ankyrin repeat and SOCS box containing 13
ATOH7 atonal homolog 7 (Drosophila)
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide
AUTS2 autism susceptibility candidate 2
BAIAP2L1 BAI1-associated protein 2-like 1
BFSP1 beaded filament structural protein 1, filensin
BICD2 bicaudal D homolog 2 (Drosophila)
BMS1 BMS1 ribosome biogenesis factor
BREA2 breast cancer estrogen-induced apoptosis 2
BTBD2 BTB (POZ) domain containing 2
C14ORF93 chromosome 14 open reading frame 93
C20ORF144 chromosome 20 open reading frame 144
C22ORF39 chromosome 22 open reading frame 39
C3ORF79 chromosome 3 open reading frame 79
C4ORF17 chromosome 4 open reading frame 17
C9ORF3 chromosome 9 open reading frame 3
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1
CALML3 calmodulin-like 3
CAPN12 calpain 12
CCDC116 coiled-coil domain containing 116
CCDC6 coiled-coil domain containing 6
CCT6P1 chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1
CDHR1 cadherin-related family member 1
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CECR5-AS1 CECR5 antisense RNA 1
CGREF1 cell growth regulator with EF-hand domain 1
CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10
CLDN22 claudin 22
CLLU1 chronic lymphocytic leukemia up-regulated 1
COX6B1 cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
CSTL1 cystatin-like 1
DDT D-dopachrome tautomerase
DDTL D-dopachrome tautomerase-like
DEFB126 defensin, beta 126
DGCR6 DiGeorge syndrome critical region gene 6
DHRS4 dehydrogenase/reductase (SDR family) member 4
DHRS4L1 dehydrogenase/reductase (SDR family) member 4 like 1
DHRS4L2 dehydrogenase/reductase (SDR family) member 4 like 2
DLD dihydrolipoamide dehydrogenase
DMTF1 cyclin D binding myb-like transcription factor 1
DNAH17 dynein, axonemal, heavy chain 17
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DNAJC30 DnaJ (Hsp40) homolog, subfamily C, member 30
DPYSL4 dihydropyrimidinase-like 4
DTX2P1-UPK3BP1-PMS2P11 DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene
DZIP1L DAZ interacting zinc finger protein 1-like
ECSIT ECSIT signalling integrator
EFNA1 ephrin-A1
EIF3K eukaryotic translation initiation factor 3, subunit K
EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1
EIF4H eukaryotic translation initiation factor 4H
ESR2 estrogen receptor 2 (ER beta)
FADS6 fatty acid desaturase 6
FAM131C family with sequence similarity 131, member C
FAM153A family with sequence similarity 153, member A
FAM153B family with sequence similarity 153, member B
FAM189B family with sequence similarity 189, member B
FAM71D family with sequence similarity 71, member D
FAM72A family with sequence similarity 72, member A
FAM72B family with sequence similarity 72, member B
FAM98C family with sequence similarity 98, member C
FBL fibrillarin
FBXO18 F-box protein, helicase, 18
FBXO27 F-box protein 27
FLVCR1-AS1 FLVCR1 antisense RNA 1 (head to head)
FLYWCH1 FLYWCH-type zinc finger 1
FSCN1 fascin actin-bundling protein 1
GAS2L1 growth arrest-specific 2 like 1
GGT3P gamma-glutamyltransferase 3 pseudogene
GGT8P gamma-glutamyltransferase 8 pseudogene
GJB2 gap junction protein, beta 2, 26kDa
GJB6 gap junction protein, beta 6, 30kDa
GLI4 GLI family zinc finger 4
GML glycosylphosphatidylinositol anchored molecule like
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
GOLGA6C golgin A6 family, member C
GOLGA6D golgin A6 family, member D
GPI glucose-6-phosphate isomerase
GPR26 G protein-coupled receptor 26
GPR68 G protein-coupled receptor 68
GSAP gamma-secretase activating protein
GSTTP1 glutathione S-transferase theta pseudogene 1
GTF2IP1 general transcription factor IIi pseudogene 1
GTF2IRD2 GTF2I repeat domain containing 2
GTF2IRD2P1 GTF2I repeat domain containing 2 pseudogene 1
HBE1 hemoglobin, epsilon 1
HEATR1 HEAT repeat containing 1
HHAT hedgehog acyltransferase
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HOXA11-AS HOXA11 antisense RNA
HOXA4 homeobox A4
HOXA7 homeobox A7
HPS4 Hermansky-Pudlak syndrome 4
HRNR hornerin
HSPB1 heat shock 27kDa protein 1
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
IL1F10 interleukin 1 family, member 10 (theta)
IL36B interleukin 36, beta
IL36G interleukin 36, gamma
IL36RN interleukin 36 receptor antagonist
IVL involucrin
JAKMIP3 Janus kinase and microtubule interacting protein 3
KCNG3 potassium channel, voltage gated modifier subfamily G, member 3
KCNK6 potassium channel, two pore domain subfamily K, member 6
KCTD15 potassium channel tetramerization domain containing 15
KCTD9 potassium channel tetramerization domain containing 9
KLK2 kallikrein-related peptidase 2
KRI1 KRI1 homolog (S. cerevisiae)
KRT16 keratin 16, type I
KRT74 keratin 74, type II
LAD1 ladinin 1
LAMTOR2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
LIMK1 LIM domain kinase 1
LIN37 lin-37 DREAM MuvB core complex component
LINC00173 long intergenic non-protein coding RNA 173
LINC00520 long intergenic non-protein coding RNA 520
LOC100128573 uncharacterized LOC100128573
LOC154761 family with sequence similarity 115, member C pseudogene
LOC284632 uncharacterized LOC284632
LOC391322 D-dopachrome tautomerase-like
LOC493754
LRRC16B leucine rich repeat containing 16B
LRRC37A3 leucine rich repeat containing 37, member A3
LRRC69 leucine rich repeat containing 69
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAGEB6 melanoma antigen family B6
MAGED4 melanoma antigen family D4
MAP2K2 mitogen-activated protein kinase kinase 2
MAP3K10 mitogen-activated protein kinase kinase kinase 10
MASTL microtubule associated serine/threonine kinase-like
MAX MYC associated factor X
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MDH2 malate dehydrogenase 2, NAD (mitochondrial)
MEPCE methylphosphate capping enzyme
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
MOB3A MOB kinase activator 3A
MPP7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
MRPS14 mitochondrial ribosomal protein S14
MRPS21 mitochondrial ribosomal protein S21
MTPAP mitochondrial poly(A) polymerase
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase
NAA38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit
NAV1 neuron navigator 1
NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)
NET1 neuroepithelial cell transforming 1
NFIL3 nuclear factor, interleukin 3 regulated
NMB neuromedin B
NMRK1 nicotinamide riboside kinase 1
NOTCH3 notch 3
NPL N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
NSUN5 NOP2/Sun domain family, member 5
NSUN5P1 NOP2/Sun domain family, member 5 pseudogene 1
NSUN6 NOP2/Sun domain family, member 6
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1
NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1
NUDT5 nudix (nucleoside diphosphate linked moiety X)-type motif 5
NUTM2F NUT family member 2F
OCLM oculomedin
OR10H2 olfactory receptor, family 10, subfamily H, member 2
OR51A4 olfactory receptor, family 51, subfamily A, member 4
OR51B5 olfactory receptor, family 51, subfamily B, member 5
OR51G1 olfactory receptor, family 51, subfamily G, member 1 (gene/pseudogene)
OR6C2 olfactory receptor, family 6, subfamily C, member 2
OR6N2 olfactory receptor, family 6, subfamily N, member 2
PARD3 par-3 family cell polarity regulator
PARG poly (ADP-ribose) glycohydrolase
PCDHGA9 protocadherin gamma subfamily A, 9
PDCD5 programmed cell death 5
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1
PES1 pescadillo ribosomal biogenesis factor 1
PGF placental growth factor
PKP1 plakophilin 1
PMS2P2 postmeiotic segregation increased 2 pseudogene 2
POLR2J polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa
POLRMT polymerase (RNA) mitochondrial (DNA directed)
POM121 POM121 transmembrane nucleoporin
POM121C POM121 transmembrane nucleoporin C
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
POM121L8P POM121 transmembrane nucleoporin-like 8 pseudogene
POR P450 (cytochrome) oxidoreductase
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
PPIAL4C peptidylprolyl isomerase A (cyclophilin A)-like 4C
PPM1F protein phosphatase, Mg2+/Mn2+ dependent, 1F
PPP1R3E protein phosphatase 1, regulatory subunit 3E
PPP2R5A protein phosphatase 2, regulatory subunit B', alpha
PRG1 p53-responsive gene 1
PRPF18 pre-mRNA processing factor 18
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
PYDC2 pyrin domain containing 2
RAB29 RAB29, member RAS oncogene family
RAB3D RAB3D, member RAS oncogene family
RAD51AP2 RAD51 associated protein 2
RASA4CP RAS p21 protein activator 4C, pseudogene
RBM17 RNA binding motif protein 17
RBM42 RNA binding motif protein 42
RBP3 retinol binding protein 3, interstitial
RCOR3 REST corepressor 3
RHBDD3 rhomboid domain containing 3
RNF175 ring finger protein 175
RNFT2 ring finger protein, transmembrane 2
RPL37 ribosomal protein L37
RPS16 ribosomal protein S16
SAMD4B sterile alpha motif domain containing 4B
SDHAF1 succinate dehydrogenase complex assembly factor 1
SHFM1 split hand/foot malformation (ectrodactyly) type 1
SLC13A5 solute carrier family 13 (sodium-dependent citrate transporter), member 5
SLC22A25 solute carrier family 22, member 25
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11
SLC37A2 solute carrier family 37 (glucose-6-phosphate transporter), member 2
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5
SMCO1 single-pass membrane protein with coiled-coil domains 1
SMYD2 SET and MYND domain containing 2
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa
SNORA13 small nucleolar RNA, H/ACA box 13
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA62 small nucleolar RNA, H/ACA box 62
SNORA67 small nucleolar RNA, H/ACA box 67
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SPAG11A sperm associated antigen 11A
SPDYE7P speedy/RINGO cell cycle regulator family member E7, pseudogene
SPINT2 serine peptidase inhibitor, Kunitz type, 2
SPRR2B small proline-rich protein 2B
SRPK2 SRSF protein kinase 2
SRRM3 serine/arginine repetitive matrix 3
SSTR4 somatostatin receptor 4
ST7-AS1 ST7 antisense RNA 1
ST7-OT4 ST7 overlapping transcript 4
STAG3L1 stromal antigen 3-like 1 (pseudogene)
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae)
SVIL supervillin
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TBC1D2 TBC1 domain family, member 2
TBL2 transducin (beta)-like 2
TCAF2 TRPM8 channel-associated factor 2
TDRD5 tudor domain containing 5
THAP8 THAP domain containing 8
THBD thrombomodulin
THNSL1 threonine synthase-like 1 (S. cerevisiae)
THOC5 THO complex 5
TMEM147 transmembrane protein 147
TNNI1 troponin I type 1 (skeletal, slow)
TNNT2 troponin T type 2 (cardiac)
TOMM20L translocase of outer mitochondrial membrane 20 homolog (yeast)-like
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast)
TOP3B topoisomerase (DNA) III beta
TPTE2P3 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3
TRIL TLR4 interactor with leucine-rich repeats
TSHB thyroid stimulating hormone, beta
TTC7B tetratricopeptide repeat domain 7B
TTTY5 testis-specific transcript, Y-linked 5 (non-protein coding)
U2AF1L4 U2 small nuclear RNA auxiliary factor 1-like 4
UBOX5 U-box domain containing 5
UGT1A1 UDP glucuronosyltransferase 1 family, polypeptide A1
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X
VAMP4 vesicle-associated membrane protein 4
WBSCR16 Williams-Beuren syndrome chromosome region 16
WDR62 WD repeat domain 62
YIF1B Yip1 interacting factor homolog B (S. cerevisiae)
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
YY1AP1 YY1 associated protein 1
ZFAT-AS1 ZFAT antisense RNA 1
ZNF133 zinc finger protein 133
ZNF277 zinc finger protein 277
ZNF488 zinc finger protein 488
ZNF658 zinc finger protein 658
ZP3 zona pellucida glycoprotein 3 (sperm receptor)

low expression

Symbol Name
CLCC1 chloride channel CLIC-like 1
DDX20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
RSBN1 round spermatid basic protein 1
STXBP3 syntaxin binding protein 3