Lung squamous cell carcinoma_LUSC_TCGA-77-8136-01A-11R-2247-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Lung squamous cell carcinoma_LUSC (The Cancer Genome Atlas)
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Genes

299 genes with high or low expression in Lung squamous cell carcinoma_LUSC_TCGA-77-8136-01A-11R-2247-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCB5 ATP-binding cassette, sub-family B (MDR/TAP), member 5
ACOT4 acyl-CoA thioesterase 4
ACP2 acid phosphatase 2, lysosomal
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2
ADCY1 adenylate cyclase 1 (brain)
AEBP1 AE binding protein 1
ALMS1P Alstrom syndrome 1 pseudogene
AMPH amphiphysin
ANAPC4 anaphase promoting complex subunit 4
AP2A1 adaptor-related protein complex 2, alpha 1 subunit
APOL1 apolipoprotein L, 1
APOL3 apolipoprotein L, 3
APOL4 apolipoprotein L, 4
APOL6 apolipoprotein L, 6
ARHGAP11B Rho GTPase activating protein 11B
ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1
ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2
B3GALTL beta 1,3-galactosyltransferase-like
BAG1 BCL2-associated athanogene
BAGE2 B melanoma antigen family, member 2
BATF basic leucine zipper transcription factor, ATF-like
BATF2 basic leucine zipper transcription factor, ATF-like 2
BCL2L15 BCL2-like 15
BST2 bone marrow stromal cell antigen 2
C11ORF94 chromosome 11 open reading frame 94
C1ORF100 chromosome 1 open reading frame 100
C1QL1 complement component 1, q subcomponent-like 1
C1R complement component 1, r subcomponent
C5ORF58 chromosome 5 open reading frame 58
CA5BP1 carbonic anhydrase VB pseudogene 1
CA9 carbonic anhydrase IX
CABLES2 Cdk5 and Abl enzyme substrate 2
CALM3 calmodulin 3 (phosphorylase kinase, delta)
CBWD2 COBW domain containing 2
CCDC137 coiled-coil domain containing 137
CCDC9 coiled-coil domain containing 9
CCL7 chemokine (C-C motif) ligand 7
CCL8 chemokine (C-C motif) ligand 8
CDAN1 codanin 1
CDCA2 cell division cycle associated 2
CDH18 cadherin 18, type 2
CDKN2A cyclin-dependent kinase inhibitor 2A
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CFH complement factor H
CGB7 chorionic gonadotropin, beta polypeptide 7
CHRNA3 cholinergic receptor, nicotinic, alpha 3 (neuronal)
CIC capicua transcriptional repressor
CLPTM1L CLPTM1-like
CLSTN1 calsyntenin 1
CMPK2 cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
COL16A1 collagen, type XVI, alpha 1
COL18A1 collagen, type XVIII, alpha 1
COL1A1 collagen, type I, alpha 1
COL1A2 collagen, type I, alpha 2
COL3A1 collagen, type III, alpha 1
COL5A1 collagen, type V, alpha 1
COL6A2 collagen, type VI, alpha 2
CRELD2 cysteine-rich with EGF-like domains 2
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL11 chemokine (C-X-C motif) ligand 11
DCAF4L2 DDB1 and CUL4 associated factor 4-like 2
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
DEF6 differentially expressed in FDCP 6 homolog (mouse)
DGCR5 DiGeorge syndrome critical region gene 5 (non-protein coding)
DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding)
DLEU2L deleted in lymphocytic leukemia 2-like
DLL1 delta-like 1 (Drosophila)
DLX4 distal-less homeobox 4
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4
DNASE1L1 deoxyribonuclease I-like 1
DTX3L deltex 3 like, E3 ubiquitin ligase
EBF2 early B-cell factor 2
ECE1 endothelin converting enzyme 1
EMC1 ER membrane protein complex subunit 1
EPSTI1 epithelial stromal interaction 1 (breast)
ERAP2 endoplasmic reticulum aminopeptidase 2
ETV7 ets variant 7
EVC2 Ellis van Creveld syndrome 2
EXTL3 exostosin-like glycosyltransferase 3
FAM101A family with sequence similarity 101, member A
FAM120C family with sequence similarity 120C
FAM133A family with sequence similarity 133, member A
FAM46A family with sequence similarity 46, member A
FAM50A family with sequence similarity 50, member A
FBXO6 F-box protein 6
FGF16 fibroblast growth factor 16
FLNA filamin A, alpha
FLT3LG fms-related tyrosine kinase 3 ligand
GBP1 guanylate binding protein 1, interferon-inducible
GBP2 guanylate binding protein 2, interferon-inducible
GBP5 guanylate binding protein 5
GDI1 GDP dissociation inhibitor 1
GGT5 gamma-glutamyltransferase 5
GJD3 gap junction protein, delta 3, 31.9kDa
GML glycosylphosphatidylinositol anchored molecule like
GNLY granulysin
GOLGA6C golgin A6 family, member C
GRIP2 glutamate receptor interacting protein 2
GRIPAP1 GRIP1 associated protein 1
GUSB glucuronidase, beta
GUSBP1 glucuronidase, beta pseudogene 1
HAPLN3 hyaluronan and proteoglycan link protein 3
HAUS3 HAUS augmin-like complex, subunit 3
HELZ2 helicase with zinc finger 2, transcriptional coactivator
HIST1H1T histone cluster 1, H1t
HLA-J major histocompatibility complex, class I, J (pseudogene)
HMGN2 high mobility group nucleosomal binding domain 2
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1
ICMT isoprenylcysteine carboxyl methyltransferase
IDO1 indoleamine 2,3-dioxygenase 1
IFI35 interferon-induced protein 35
IFI44 interferon-induced protein 44
IFI44L interferon-induced protein 44-like
IFI6 interferon, alpha-inducible protein 6
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFITM1 interferon induced transmembrane protein 1
IFITM3 interferon induced transmembrane protein 3
IFNA1 interferon, alpha 1
IFNE interferon, epsilon
IFNG interferon, gamma
IL4I1 interleukin 4 induced 1
IRF1 interferon regulatory factor 1
IRF7 interferon regulatory factor 7
IRF9 interferon regulatory factor 9
ISG15 ISG15 ubiquitin-like modifier
ISG20 interferon stimulated exonuclease gene 20kDa
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
JAG2 jagged 2
JMJD6 jumonji domain containing 6
KCTD9 potassium channel tetramerization domain containing 9
KIAA2026 KIAA2026
KPTN kaptin (actin binding protein)
LAG3 lymphocyte-activation gene 3
LAP3 leucine aminopeptidase 3
LDHAL6B lactate dehydrogenase A-like 6B
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein
LINGO2 leucine rich repeat and Ig domain containing 2
LOC341056 SUMO1 activating enzyme subunit 1 pseudogene
LOC344967 acyl-CoA thioesterase 7 pseudogene
LOC729609 uncharacterized LOC729609
LOXL1 lysyl oxidase-like 1
LOXL3 lysyl oxidase-like 3
LRPAP1 low density lipoprotein receptor-related protein associated protein 1
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAGEB1 melanoma antigen family B1
MALL mal, T-cell differentiation protein-like
MAN2B2 mannosidase, alpha, class 2B, member 2
MAP7D1 MAP7 domain containing 1
MECP2 methyl CpG binding protein 2
MED14 mediator complex subunit 14
MICB MHC class I polypeptide-related sequence B
MID1 midline 1
MMD monocyte to macrophage differentiation-associated
MMP12 matrix metallopeptidase 12
MMP2 matrix metallopeptidase 2
MRGPRX2 MAS-related GPR, member X2
MSL3 male-specific lethal 3 homolog (Drosophila)
MTAP methylthioadenosine phosphorylase
MX1 MX dynamin-like GTPase 1
MYT1L myelin transcription factor 1-like
NCSTN nicastrin
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
NGFR nerve growth factor receptor
NT5DC3 5'-nucleotidase domain containing 3
NTF4 neurotrophin 4
NUCB1 nucleobindin 1
NUP62 nucleoporin 62kDa
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa
OGFOD3 2-oxoglutarate and iron-dependent oxygenase domain containing 3
OGFR opioid growth factor receptor
OR9A2 olfactory receptor, family 9, subfamily A, member 2
OSM oncostatin M
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4
P3H1 prolyl 3-hydroxylase 1
P4HB prolyl 4-hydroxylase, beta polypeptide
PANK4 pantothenate kinase 4
PARP10 poly (ADP-ribose) polymerase family, member 10
PARP14 poly (ADP-ribose) polymerase family, member 14
PARP9 poly (ADP-ribose) polymerase family, member 9
PAX7 paired box 7
PCDHGA10 protocadherin gamma subfamily A, 10
PCDHGA3 protocadherin gamma subfamily A, 3
PCDHGA7 protocadherin gamma subfamily A, 7
PCP4L1 Purkinje cell protein 4 like 1
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1
PDIA3 protein disulfide isomerase family A, member 3
PDIA3P1 protein disulfide isomerase family A, member 3 pseudogene 1
PDIA6 protein disulfide isomerase family A, member 6
PDK3 pyruvate dehydrogenase kinase, isozyme 3
PDLIM3 PDZ and LIM domain 3
PFKL phosphofructokinase, liver
PLCD4 phospholipase C, delta 4
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
PML promyelocytic leukemia
POFUT2 protein O-fucosyltransferase 2
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit
POLD1 polymerase (DNA directed), delta 1, catalytic subunit
PP2D1 protein phosphatase 2C-like domain containing 1
PPAPDC1A phosphatidic acid phosphatase type 2 domain containing 1A
PPARD peroxisome proliferator-activated receptor delta
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPIB peptidylprolyl isomerase B (cyclophilin B)
PPP1R3F protein phosphatase 1, regulatory subunit 3F
PPP5C protein phosphatase 5, catalytic subunit
PRF1 perforin 1 (pore forming protein)
PRO0611 PRO0611 protein
PRPS2 phosphoribosyl pyrophosphate synthetase 2
PRR12 proline rich 12
PSMB9 proteasome (prosome, macropain) subunit, beta type, 9
PSMC3IP PSMC3 interacting protein
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTK2B protein tyrosine kinase 2 beta
PTPRH protein tyrosine phosphatase, receptor type, H
RBBP7 retinoblastoma binding protein 7
RBM10 RNA binding motif protein 10
RBMXL3 RNA binding motif protein, X-linked-like 3
RBPJ recombination signal binding protein for immunoglobulin kappa J region
RDH16 retinol dehydrogenase 16 (all-trans)
RNF114 ring finger protein 114
RNF213 ring finger protein 213
RPN1 ribophorin I
RSAD2 radical S-adenosyl methionine domain containing 2
SAE1 SUMO1 activating enzyme subunit 1
SAG S-antigen; retina and pineal gland (arrestin)
SBNO2 strawberry notch homolog 2 (Drosophila)
SCAF1 SR-related CTD-associated factor 1
SEC16B SEC16 homolog B (S. cerevisiae)
SECTM1 secreted and transmembrane 1
SEL1L3 sel-1 suppressor of lin-12-like 3 (C. elegans)
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
SFXN5 sideroflexin 5
SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SLC45A3 solute carrier family 45, member 3
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
SLCO1B7 solute carrier organic anion transporter family, member 1B7 (non-functional)
SLFN12L schlafen family member 12-like
SMG5 SMG5 nonsense mediated mRNA decay factor
SMG9 SMG9 nonsense mediated mRNA decay factor
SMIM20 small integral membrane protein 20
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
STAT1 signal transducer and activator of transcription 1, 91kDa
STIM2 stromal interaction molecule 2
STOML1 stomatin (EPB72)-like 1
STON1-GTF2A1L STON1-GTF2A1L readthrough
STRN4 striatin, calmodulin binding protein 4
SULF1 sulfatase 1
SUSD6 sushi domain containing 6
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
TAPBP TAP binding protein (tapasin)
TBC1D19 TBC1 domain family, member 19
TBR1 T-box, brain, 1
TFPT TCF3 (E2A) fusion partner (in childhood Leukemia)
THBS2 thrombospondin 2
TIFAB TRAF-interacting protein with forkhead-associated domain, family member B
TM6SF2 transmembrane 6 superfamily member 2
TMEM229B transmembrane protein 229B
TPM2 tropomyosin 2 (beta)
TRAM2 translocation associated membrane protein 2
TRANK1 tetratricopeptide repeat and ankyrin repeat containing 1
TRAPPC2 trafficking protein particle complex 2
TRIM21 tripartite motif containing 21
TRIM40 tripartite motif containing 40
TRIM46 tripartite motif containing 46
TRIM47 tripartite motif containing 47
TRIM69 tripartite motif containing 69
TSHZ3 teashirt zinc finger homeobox 3
TTC31 tetratricopeptide repeat domain 31
TTLL5 tubulin tyrosine ligase-like family member 5
TUBG1 tubulin, gamma 1
UBA7 ubiquitin-like modifier activating enzyme 7
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast)
USP9X ubiquitin specific peptidase 9, X-linked
VLDLR very low density lipoprotein receptor
WBSCR16 Williams-Beuren syndrome chromosome region 16
WDR76 WD repeat domain 76
WDR86 WD repeat domain 86
XAF1 XIAP associated factor 1
XIRP1 xin actin binding repeat containing 1
XRN1 5'-3' exoribonuclease 1
ZBP1 Z-DNA binding protein 1
ZIK1 zinc finger protein interacting with K protein 1
ZNF395 zinc finger protein 395
ZNF418 zinc finger protein 418
ZNF45 zinc finger protein 45
ZNF469 zinc finger protein 469
ZNF473 zinc finger protein 473
ZNF544 zinc finger protein 544
ZNFX1 zinc finger, NFX1-type containing 1
ZSCAN20 zinc finger and SCAN domain containing 20
ZSCAN22 zinc finger and SCAN domain containing 22