Lung squamous cell carcinoma_LUSC_TCGA-68-8250-01A-11R-2296-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Lung squamous cell carcinoma_LUSC (The Cancer Genome Atlas)
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Genes

368 genes with high or low expression in Lung squamous cell carcinoma_LUSC_TCGA-68-8250-01A-11R-2296-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10
ABHD16B abhydrolase domain containing 16B
ACOX3 acyl-CoA oxidase 3, pristanoyl
ACVR1B activin A receptor, type IB
ACYP2 acylphosphatase 2, muscle type
ADCY2 adenylate cyclase 2 (brain)
ADCY9 adenylate cyclase 9
ADIPOR2 adiponectin receptor 2
ADRM1 adhesion regulating molecule 1
AFAP1 actin filament associated protein 1
AFTPH aftiphilin
AGRN agrin
ALMS1P Alstrom syndrome 1 pseudogene
ALOX15 arachidonate 15-lipoxygenase
AMOTL2 angiomotin like 2
ANKRD39 ankyrin repeat domain 39
ANKUB1 ankyrin repeat and ubiquitin domain containing 1
AQP4-AS1 AQP4 antisense RNA 1
ARF3 ADP-ribosylation factor 3
ARHGAP39 Rho GTPase activating protein 39
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35
ARID5B AT rich interactive domain 5B (MRF1-like)
ARSJ arylsulfatase family, member J
ATF5 activating transcription factor 5
ATF7 activating transcription factor 7
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1
ATPIF1 ATPase inhibitory factor 1
AVPI1 arginine vasopressin-induced 1
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
BAZ2A bromodomain adjacent to zinc finger domain, 2A
BCAS3 breast carcinoma amplified sequence 3
BCL2L1 BCL2-like 1
BCL6 B-cell CLL/lymphoma 6
BMP3 bone morphogenetic protein 3
C11ORF16 chromosome 11 open reading frame 16
C12ORF74 chromosome 12 open reading frame 74
C17ORF59 chromosome 17 open reading frame 59
C20ORF144 chromosome 20 open reading frame 144
C2ORF50 chromosome 2 open reading frame 50
C2ORF61 chromosome 2 open reading frame 61
C2ORF81 chromosome 2 open reading frame 81
C5ORF49 chromosome 5 open reading frame 49
C7ORF57 chromosome 7 open reading frame 57
CAMTA1 calmodulin binding transcription activator 1
CANX calnexin
CASC1 cancer susceptibility candidate 1
CASP7 caspase 7, apoptosis-related cysteine peptidase
CBWD2 COBW domain containing 2
CBWD3 COBW domain containing 3
CCDC171 coiled-coil domain containing 171
CCDC173 coiled-coil domain containing 173
CCDC40 coiled-coil domain containing 40
CCDC96 coiled-coil domain containing 96
CCND2 cyclin D2
CDK11A cyclin-dependent kinase 11A
CDK11B cyclin-dependent kinase 11B
CDK13 cyclin-dependent kinase 13
CFAP126 cilia and flagella associated protein 126
CFAP36 cilia and flagella associated protein 36
CFAP45 cilia and flagella associated protein 45
CHD3 chromodomain helicase DNA binding protein 3
CHIT1 chitinase 1 (chitotriosidase)
CHMP4B charged multivesicular body protein 4B
CHODL-AS1 CHODL antisense RNA 1
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CIAO1 cytosolic iron-sulfur assembly component 1
CLDN11 claudin 11
CLGN calmegin
CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4
CNST consortin, connexin sorting protein
CNTNAP3 contactin associated protein-like 3
CNTROB centrobin, centrosomal BRCA2 interacting protein
CSAD cysteine sulfinic acid decarboxylase
CSMD1 CUB and Sushi multiple domains 1
CSN1S1 casein alpha s1
CSNK1D casein kinase 1, delta
CYB561 cytochrome b561
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
CYP4F30P cytochrome P450, family 4, subfamily F, polypeptide 30, pseudogene
CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1
CYP4Z1 cytochrome P450, family 4, subfamily Z, polypeptide 1
DAZAP2 DAZ associated protein 2
DAZL deleted in azoospermia-like
DBP D site of albumin promoter (albumin D-box) binding protein
DCAF7 DDB1 and CUL4 associated factor 7
DCTN1 dynactin 1
DDIT3 DNA-damage-inducible transcript 3
DDIT4 DNA-damage-inducible transcript 4
DDR1 discoidin domain receptor tyrosine kinase 1
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
DGKE diacylglycerol kinase, epsilon 64kDa
DHRS3 dehydrogenase/reductase (SDR family) member 3
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15
DLGAP1 discs, large (Drosophila) homolog-associated protein 1
DLK2 delta-like 2 homolog (Drosophila)
DLL1 delta-like 1 (Drosophila)
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11
DNAJC14 DnaJ (Hsp40) homolog, subfamily C, member 14
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DPYSL3 dihydropyrimidinase-like 3
DYNC2LI1 dynein, cytoplasmic 2, light intermediate chain 1
EFCAB1 EF-hand calcium binding domain 1
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1
EFHC2 EF-hand domain (C-terminal) containing 2
EIF5B eukaryotic translation initiation factor 5B
ERC1 ELKS/RAB6-interacting/CAST family member 1
ERICH6 glutamate-rich 6
ERICH6B glutamate-rich 6B
ESYT2 extended synaptotagmin-like protein 2
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
EXOC7 exocyst complex component 7
EYA2 EYA transcriptional coactivator and phosphatase 2
FAHD2A fumarylacetoacetate hydrolase domain containing 2A
FAM120C family with sequence similarity 120C
FAM161A family with sequence similarity 161, member A
FAM200B family with sequence similarity 200, member B
FAM27B family with sequence similarity 27, member B
FAM3D family with sequence similarity 3, member D
FAT3 FAT atypical cadherin 3
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2
FER1L5 fer-1-like family member 5
FER1L6 fer-1-like family member 6
FGFR2 fibroblast growth factor receptor 2
FIGN fidgetin
FKBP9 FK506 binding protein 9, 63 kDa
FKBP9P1 FK506 binding protein 9 pseudogene 1
FMO3 flavin containing monooxygenase 3
FOXA1 forkhead box A1
FOXJ1 forkhead box J1
FRMPD4 FERM and PDZ domain containing 4
FXR2 fragile X mental retardation, autosomal homolog 2
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2
GABRQ gamma-aminobutyric acid (GABA) A receptor, theta
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GDF7 growth differentiation factor 7
GFPT1 glutamine--fructose-6-phosphate transaminase 1
GGT7 gamma-glutamyltransferase 7
GMCL1 germ cell-less, spermatogenesis associated 1
GNAS GNAS complex locus
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GNL1 guanine nucleotide binding protein-like 1
GNS glucosamine (N-acetyl)-6-sulfatase
HILPDA hypoxia inducible lipid droplet-associated
HMGB3 high mobility group box 3
HS3ST3B1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
HSFX2 heat shock transcription factor family, X linked 2
HTR1E 5-hydroxytryptamine (serotonin) receptor 1E, G protein-coupled
HTR7P1 5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1
HYDIN HYDIN, axonemal central pair apparatus protein
IDO1 indoleamine 2,3-dioxygenase 1
IFT22 intraflagellar transport 22
INO80B INO80 complex subunit B
IQUB IQ motif and ubiquitin domain containing
KANSL3 KAT8 regulatory NSL complex subunit 3
KATNB1 katanin p80 (WD repeat containing) subunit B 1
KCND1 potassium channel, voltage gated Shal related subfamily D, member 1
KCNE4 potassium channel, voltage gated subfamily E regulatory beta subunit 4
KCNG1 potassium channel, voltage gated modifier subfamily G, member 1
KCNJ2 potassium channel, inwardly rectifying subfamily J, member 2
KCNU1 potassium channel, subfamily U, member 1
KIAA0195 KIAA0195
KIAA1324 KIAA1324
KIAA1467 KIAA1467
KIF21A kinesin family member 21A
KIF3B kinesin family member 3B
KIF9 kinesin family member 9
KLHL5 kelch-like family member 5
KLK10 kallikrein-related peptidase 10
KLK11 kallikrein-related peptidase 11
KNCN kinocilin
KRT15 keratin 15, type I
LACTB2 lactamase, beta 2
LAMA5 laminin, alpha 5
LARP4 La ribonucleoprotein domain family, member 4
LCN2 lipocalin 2
LINC00596 long intergenic non-protein coding RNA 596
LMAN2L lectin, mannose-binding 2-like
LOC148413 uncharacterized LOC148413
LOC643387 TAR DNA binding protein pseudogene
LOC93622 Morf4 family associated protein 1-like 1 pseudogene
LRRC37A3 leucine rich repeat containing 37, member A3
LRRC47 leucine rich repeat containing 47
LRRC6 leucine rich repeat containing 6
LRRC73 leucine rich repeat containing 73
LRRN1 leucine rich repeat neuronal 1
LSM14B LSM14B, SCD6 homolog B (S. cerevisiae)
LYPD6B LY6/PLAUR domain containing 6B
MAK male germ cell-associated kinase
MAN2B2 mannosidase, alpha, class 2B, member 2
MAPK15 mitogen-activated protein kinase 15
MARS methionyl-tRNA synthetase
MBD6 methyl-CpG binding domain protein 6
METTL16 methyltransferase like 16
METTL7A methyltransferase like 7A
MINK1 misshapen-like kinase 1
MLF1 myeloid leukemia factor 1
MORN2 MORN repeat containing 2
MRFAP1 Morf4 family associated protein 1
MRFAP1L1 Morf4 family associated protein 1-like 1
MRPL30 mitochondrial ribosomal protein L30
MYO3B myosin IIIB
N4BP2 NEDD4 binding protein 2
NACAP1 nascent-polypeptide-associated complex alpha polypeptide pseudogene 1
NBEA neurobeachin
NBPF1 neuroblastoma breakpoint family, member 1
NCKAP5L NCK-associated protein 5-like
NEK11 NIMA-related kinase 11
NELFCD negative elongation factor complex member C/D
NLGN2 neuroligin 2
NOL6 nucleolar protein 6 (RNA-associated)
NPHP1 nephronophthisis 1 (juvenile)
NPHP4 nephronophthisis 4
NSUN7 NOP2/Sun domain family, member 7
NTN1 netrin 1
NUPR1 nuclear protein, transcriptional regulator, 1
NXPH4 neurexophilin 4
OGFOD3 2-oxoglutarate and iron-dependent oxygenase domain containing 3
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin
OSR1 odd-skipped related transciption factor 1
OSTN osteocrin
PACRG PARK2 co-regulated
PAIP2B poly(A) binding protein interacting protein 2B
PAN2 PAN2 poly(A) specific ribonuclease subunit
PAQR4 progestin and adipoQ receptor family member IV
PARK7 parkinson protein 7
PARP11 poly (ADP-ribose) polymerase family, member 11
PELP1 proline, glutamate and leucine rich protein 1
PER1 period circadian clock 1
PER2 period circadian clock 2
PEX10 peroxisomal biogenesis factor 10
PHF13 PHD finger protein 13
PHF20L1 PHD finger protein 20-like 1
PIGT phosphatidylinositol glycan anchor biosynthesis, class T
PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
PITPNM3 PITPNM family member 3
PLEKHG7 pleckstrin homology domain containing, family G (with RhoGef domain) member 7
PLEKHS1 pleckstrin homology domain containing, family S member 1
POM121L4P POM121 transmembrane nucleoporin-like 4 pseudogene
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
POTED POTE ankyrin domain family, member D
PPP1R12B protein phosphatase 1, regulatory subunit 12B
PPP1R3F protein phosphatase 1, regulatory subunit 3F
PREPL prolyl endopeptidase-like
PRPF8 pre-mRNA processing factor 8
PRPS2 phosphoribosyl pyrophosphate synthetase 2
PRR13 proline rich 13
PTMS parathymosin
R3HDM2 R3H domain containing 2
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic)
RALY RALY heterogeneous nuclear ribonucleoprotein
RARRES3 retinoic acid receptor responder (tazarotene induced) 3
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1
RBM47 RNA binding motif protein 47
RECQL5 RecQ protein-like 5
RERE arginine-glutamic acid dipeptide (RE) repeats
REV1 REV1, polymerase (DNA directed)
RFX3 regulatory factor X, 3 (influences HLA class II expression)
RIBC1 RIB43A domain with coiled-coils 1
RNF114 ring finger protein 114
RNF167 ring finger protein 167
RP9P retinitis pigmentosa 9 pseudogene
RPIA ribose 5-phosphate isomerase A
RPL13P5 ribosomal protein L13 pseudogene 5
RPL22 ribosomal protein L22
RPN2 ribophorin II
RPS26P11 ribosomal protein S26 pseudogene 11
RSG1 REM2 and RAB-like small GTPase 1
RTFDC1 replication termination factor 2 domain containing 1
RTN4RL1 reticulon 4 receptor-like 1
RTP1 receptor (chemosensory) transporter protein 1
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SDF4 stromal cell derived factor 4
SEC14L1 SEC14-like 1 (S. cerevisiae)
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2
SERTAD2 SERTA domain containing 2
SESN2 sestrin 2
SFXN5 sideroflexin 5
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2
SLC35C2 solute carrier family 35 (GDP-fucose transporter), member C2
SLC39A11 solute carrier family 39, member 11
SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
SMURF1 SMAD specific E3 ubiquitin protein ligase 1
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNORA41 small nucleolar RNA, H/ACA box 41
SNORA5C small nucleolar RNA, H/ACA box 5C
SNORA71B small nucleolar RNA, H/ACA box 71B
SNORA75 small nucleolar RNA, H/ACA box 75
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5)
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
SP8 Sp8 transcription factor
SPATA17 spermatogenesis associated 17
SPATA2 spermatogenesis associated 2
SPATA33 spermatogenesis associated 33
SPDYE2 speedy/RINGO cell cycle regulator family member E2
SPDYE5 speedy/RINGO cell cycle regulator family member E5
SPDYE6 speedy/RINGO cell cycle regulator family member E6
SPEM1 spermatid maturation 1
SPRY3 sprouty homolog 3 (Drosophila)
SPSB2 splA/ryanodine receptor domain and SOCS box containing 2
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1
SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
ST6GALNAC1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
STAMBP STAM binding protein
STAU1 staufen double-stranded RNA binding protein 1
STIM2 stromal interaction molecule 2
STK38 serine/threonine kinase 38
SYBU syntabulin (syntaxin-interacting)
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAS2R50 taste receptor, type 2, member 50
TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3
TBC1D8 TBC1 domain family, member 8 (with GRAM domain)
TET3 tet methylcytosine dioxygenase 3
TEX261 testis expressed 261
TGOLN2 trans-golgi network protein 2
TMBIM6 transmembrane BAX inhibitor motif containing 6
TMEM127 transmembrane protein 127
TMEM131 transmembrane protein 131
TMEM150C transmembrane protein 150C
TMEM231 transmembrane protein 231
TMEM52B transmembrane protein 52B
TMPRSS7 transmembrane protease, serine 7
TOP1 topoisomerase (DNA) I
TOX3 TOX high mobility group box family member 3
TP53I11 tumor protein p53 inducible protein 11
TP73 tumor protein p73
TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1
TRIB3 tribbles pseudokinase 3
TRIM56 tripartite motif containing 56
TROAP trophinin associated protein
TSR2 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
TTC23L tetratricopeptide repeat domain 23-like
TTLL9 tubulin tyrosine ligase-like family member 9
TYRP1 tyrosinase-related protein 1
UGP2 UDP-glucose pyrophosphorylase 2
UGT1A8 UDP glucuronosyltransferase 1 family, polypeptide A8
UGT2A1 UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
WBP1 WW domain binding protein 1
WDFY3-AS2 WDFY3 antisense RNA 2
WDPCP WD repeat containing planar cell polarity effector
WDR1 WD repeat domain 1
WDR45B WD repeat domain 45B
WIPI1 WD repeat domain, phosphoinositide interacting 1
WNK3 WNK lysine deficient protein kinase 3
WNT7B wingless-type MMTV integration site family, member 7B
WRAP53 WD repeat containing, antisense to TP53
WWTR1 WW domain containing transcription regulator 1
XPOT exportin, tRNA
ZBTB48 zinc finger and BTB domain containing 48
ZC3H3 zinc finger CCCH-type containing 3
ZNF518B zinc finger protein 518B

low expression

Symbol Name
ATAD1 ATPase family, AAA domain containing 1
TCTN3 tectonic family member 3
ZNF140 zinc finger protein 140