Lung squamous cell carcinoma_LUSC_TCGA-56-A5DS-01A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Lung squamous cell carcinoma_LUSC (The Cancer Genome Atlas)
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Genes

263 genes with high or low expression in Lung squamous cell carcinoma_LUSC_TCGA-56-A5DS-01A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA13 ATP-binding cassette, sub-family A (ABC1), member 13
ABCA7 ATP-binding cassette, sub-family A (ABC1), member 7
ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10
ADGRD2 adhesion G protein-coupled receptor D2
AKAP10 A kinase (PRKA) anchor protein 10
AKIP1 A kinase (PRKA) interacting protein 1
ALKBH5 AlkB family member 5, RNA demethylase
ANKK1 ankyrin repeat and kinase domain containing 1
ANKRD12 ankyrin repeat domain 12
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
APOBEC3C apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
ATP13A5 ATPase type 13A5
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2
ATXN7L3 ataxin 7-like 3
BAALC brain and acute leukemia, cytoplasmic
BAALC-AS2 BAALC antisense RNA 2
BCL6 B-cell CLL/lymphoma 6
BECN1 beclin 1, autophagy related
BEST4 bestrophin 4
BMP3 bone morphogenetic protein 3
BPIFA1 BPI fold containing family A, member 1
C2ORF66 chromosome 2 open reading frame 66
C4ORF50 chromosome 4 open reading frame 50
C5ORF52 chromosome 5 open reading frame 52
C6ORF10 chromosome 6 open reading frame 10
CACNB1 calcium channel, voltage-dependent, beta 1 subunit
CACNB4 calcium channel, voltage-dependent, beta 4 subunit
CALML4 calmodulin-like 4
CASP3 caspase 3, apoptosis-related cysteine peptidase
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC146 coiled-coil domain containing 146
CCDC163P coiled-coil domain containing 163, pseudogene
CCDC57 coiled-coil domain containing 57
CD300LD CD300 molecule-like family member d
CDNF cerebral dopamine neurotrophic factor
CEP19 centrosomal protein 19kDa
CEP192 centrosomal protein 192kDa
CES3 carboxylesterase 3
CHKB-CPT1B CHKB-CPT1B readthrough (NMD candidate)
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal)
CHST6 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CLEC4F C-type lectin domain family 4, member F
CLHC1 clathrin heavy chain linker domain containing 1
CNTD1 cyclin N-terminal domain containing 1
CPA6 carboxypeptidase A6
CPT1B carnitine palmitoyltransferase 1B (muscle)
CUEDC1 CUE domain containing 1
CUL9 cullin 9
CXCL6 chemokine (C-X-C motif) ligand 6
CYB561D1 cytochrome b561 family, member D1
CYCSP52 cytochrome c, somatic pseudogene 52
CYP2A13 cytochrome P450, family 2, subfamily A, polypeptide 13
CYP4F12 cytochrome P450, family 4, subfamily F, polypeptide 12
CYTH1 cytohesin 1
D2HGDH D-2-hydroxyglutarate dehydrogenase
DHRS7B dehydrogenase/reductase (SDR family) member 7B
DHRS9 dehydrogenase/reductase (SDR family) member 9
DNAH17 dynein, axonemal, heavy chain 17
DNAJB13 DnaJ (Hsp40) homolog, subfamily B, member 13
DNAJC28 DnaJ (Hsp40) homolog, subfamily C, member 28
DQX1 DEAQ box RNA-dependent ATPase 1
DRG2 developmentally regulated GTP binding protein 2
EFHD2 EF-hand domain family, member D2
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1
ELMOD3 ELMO/CED-12 domain containing 3
EML4 echinoderm microtubule associated protein like 4
EPN2 epsin 2
EPX eosinophil peroxidase
EVPLL envoplakin-like
EXOC7 exocyst complex component 7
FAAH fatty acid amide hydrolase
FAM102B family with sequence similarity 102, member B
FAM106A family with sequence similarity 106, member A
FAM134C family with sequence similarity 134, member C
FAM212B family with sequence similarity 212, member B
FAM74A4 family with sequence similarity 74, member A4
FAM84A family with sequence similarity 84, member A
FARP2 FERM, RhoGEF and pleckstrin domain protein 2
FBF1 Fas (TNFRSF6) binding factor 1
FLII flightless I homolog (Drosophila)
FLJ12825 uncharacterized LOC440101
FMO4 flavin containing monooxygenase 4
FMO6P flavin containing monooxygenase 6 pseudogene
FOXD4 forkhead box D4
FRAT1 frequently rearranged in advanced T-cell lymphomas 1
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)
GAL3ST2 galactose-3-O-sulfotransferase 2
GCH1 GTP cyclohydrolase 1
GDPGP1 GDP-D-glucose phosphorylase 1
GEN1 GEN1 Holliday junction 5' flap endonuclease
GID4 GID complex subunit 4
GLUL glutamate-ammonia ligase
GOLGA6L10 golgin A6 family-like 10
GOLGA6L9 golgin A6 family-like 9
H1FNT H1 histone family, member N, testis-specific
HCLS1 hematopoietic cell-specific Lyn substrate 1
HEATR9 HEAT repeat containing 9
HEPN1 hepatocellular carcinoma, down-regulated 1
HERC2P4 hect domain and RLD 2 pseudogene 4
HEXIM1 hexamethylene bis-acetamide inducible 1
HIST3H3 histone cluster 3, H3
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HS3ST6 heparan sulfate (glucosamine) 3-O-sulfotransferase 6
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
IKZF2 IKAROS family zinc finger 2 (Helios)
IL22 interleukin 22
INE1 inactivation escape 1 (non-protein coding)
IQCA1 IQ motif containing with AAA domain 1
JPH1 junctophilin 1
KCNS3 potassium voltage-gated channel, modifier subfamily S, member 3
KIAA0195 KIAA0195
KIAA2022 KIAA2022
KLLN killin, p53-regulated DNA replication inhibitor
KRT15 keratin 15, type I
KRT39 keratin 39, type I
KRTAP4-8 keratin associated protein 4-8
KRTAP5-6 keratin associated protein 5-6
KY kyphoscoliosis peptidase
LCE1C late cornified envelope 1C
LDLRAP1 low density lipoprotein receptor adaptor protein 1
LGALS9B lectin, galactoside-binding, soluble, 9B
LINC00526 long intergenic non-protein coding RNA 526
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LOC100130691 uncharacterized LOC100130691
LOC100132287 uncharacterized LOC100132287
LOC100133050 glucuronidase, beta pseudogene
LOC153684 uncharacterized LOC153684
LOC613037 nuclear pore complex interacting protein pseudogene
LRG1 leucine-rich alpha-2-glycoprotein 1
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
MAPK10 mitogen-activated protein kinase 10
MAPK7 mitogen-activated protein kinase 7
MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3
MASP2 mannan-binding lectin serine peptidase 2
MECOM MDS1 and EVI1 complex locus
MIEF2 mitochondrial elongation factor 2
MTMR3 myotubularin related protein 3
MTSS1 metastasis suppressor 1
MUC16 mucin 16, cell surface associated
MUC4 mucin 4, cell surface associated
MYO15A myosin XVA
MYO3B myosin IIIB
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit
NAT8B N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)
NDRG2 NDRG family member 2
NOS2 nitric oxide synthase 2, inducible
NPFF neuropeptide FF-amide peptide precursor
NRG2 neuregulin 2
NT5C1B 5'-nucleotidase, cytosolic IB
NUTM2A NUT family member 2A
NUTM2D NUT family member 2D
NWD1 NACHT and WD repeat domain containing 1
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
OPN1LW opsin 1 (cone pigments), long-wave-sensitive
OPN1MW opsin 1 (cone pigments), medium-wave-sensitive
OR10A2 olfactory receptor, family 10, subfamily A, member 2
OR10AD1 olfactory receptor, family 10, subfamily AD, member 1
OR13A1 olfactory receptor, family 13, subfamily A, member 1
OR2C1 olfactory receptor, family 2, subfamily C, member 1
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR6C2 olfactory receptor, family 6, subfamily C, member 2
OR6C70 olfactory receptor, family 6, subfamily C, member 70
OR6C76 olfactory receptor, family 6, subfamily C, member 76
OXER1 oxoeicosanoid (OXE) receptor 1
PADI1 peptidyl arginine deiminase, type I
PADI3 peptidyl arginine deiminase, type III
PAX7 paired box 7
PCDHA4 protocadherin alpha 4
PCDHGA7 protocadherin gamma subfamily A, 7
PCP4L1 Purkinje cell protein 4 like 1
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1
PF4V1 platelet factor 4 variant 1
PHF20L1 PHD finger protein 20-like 1
PHF21A PHD finger protein 21A
PIGX phosphatidylinositol glycan anchor biosynthesis, class X
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
PLCD4 phospholipase C, delta 4
PLEKHG7 pleckstrin homology domain containing, family G (with RhoGef domain) member 7
PLEKHH3 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
PLS1 plastin 1
PPP1R10 protein phosphatase 1, regulatory subunit 10
PPP1R9B protein phosphatase 1, regulatory subunit 9B
PPP4R1 protein phosphatase 4, regulatory subunit 1
PPP6R2 protein phosphatase 6, regulatory subunit 2
PRPF38B pre-mRNA processing factor 38B
PYROXD2 pyridine nucleotide-disulphide oxidoreductase domain 2
RAB12 RAB12, member RAS oncogene family
RALBP1 ralA binding protein 1
RAPGEFL1 Rap guanine nucleotide exchange factor (GEF)-like 1
RBM20 RNA binding motif protein 20
RBMXL3 RNA binding motif protein, X-linked-like 3
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
REV1 REV1, polymerase (DNA directed)
RNF103 ring finger protein 103
ROBO3 roundabout, axon guidance receptor, homolog 3 (Drosophila)
SEC16B SEC16 homolog B (S. cerevisiae)
SEMA4C sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
SERINC4 serine incorporator 4
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SKAP1 src kinase associated phosphoprotein 1
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC18B1 solute carrier family 18, subfamily B, member 1
SLC39A11 solute carrier family 39, member 11
SLC51A solute carrier family 51, alpha subunit
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SMC6 structural maintenance of chromosomes 6
SMCO1 single-pass membrane protein with coiled-coil domains 1
SMCR8 Smith-Magenis syndrome chromosome region, candidate 8
SNORA18 small nucleolar RNA, H/ACA box 18
SNORD1C small nucleolar RNA, C/D box 1C
SPACA5 sperm acrosome associated 5
SPATA32 spermatogenesis associated 32
SRRM5 serine/arginine repetitive matrix 5
ST5 suppression of tumorigenicity 5
STIM2 stromal interaction molecule 2
STK38 serine/threonine kinase 38
SUGT1P3 SUGT1 pseudogene 3
SUOX sulfite oxidase
SYNGR1 synaptogyrin 1
SYT2 synaptotagmin II
TAS2R5 taste receptor, type 2, member 5
TBC1D8 TBC1 domain family, member 8 (with GRAM domain)
TENM4 teneurin transmembrane protein 4
TLX1 T-cell leukemia homeobox 1
TMEM11 transmembrane protein 11
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B
TNRC6B trinucleotide repeat containing 6B
TOP1P1 topoisomerase (DNA) I pseudogene 1
TOP3A topoisomerase (DNA) III alpha
TRIM13 tripartite motif containing 13
TRIM25 tripartite motif containing 25
TRPV6 transient receptor potential cation channel, subfamily V, member 6
TSSK4 testis-specific serine kinase 4
TTBK1 tau tubulin kinase 1
TUBGCP6 tubulin, gamma complex associated protein 6
TVP23B trans-golgi network vesicle protein 23 homolog B (S. cerevisiae)
UBTF upstream binding transcription factor, RNA polymerase I
UGT1A10 UDP glucuronosyltransferase 1 family, polypeptide A10
ULK2 unc-51 like autophagy activating kinase 2
USP22 ubiquitin specific peptidase 22
VTCN1 V-set domain containing T cell activation inhibitor 1
WFDC2 WAP four-disulfide core domain 2
WNK4 WNK lysine deficient protein kinase 4
WNT3A wingless-type MMTV integration site family, member 3A
WNT4 wingless-type MMTV integration site family, member 4
XG Xg blood group
XIST X inactive specific transcript (non-protein coding)
ZBTB14 zinc finger and BTB domain containing 14
ZNF286B zinc finger protein 286B
ZNF322P1 zinc finger protein 322 pseudogene 1
ZNF518A zinc finger protein 518A
ZNF547 zinc finger protein 547
ZNF589 zinc finger protein 589
ZNF648 zinc finger protein 648
ZNF77 zinc finger protein 77
ZNF81 zinc finger protein 81

low expression

Symbol Name
ATG7 autophagy related 7
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome)