Lung squamous cell carcinoma_LUSC_TCGA-56-8628-01A-11R-2403-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Lung squamous cell carcinoma_LUSC (The Cancer Genome Atlas)
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Genes

433 genes with high or low expression in Lung squamous cell carcinoma_LUSC_TCGA-56-8628-01A-11R-2403-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3
ABHD16B abhydrolase domain containing 16B
ABHD17A abhydrolase domain containing 17A
ACPP acid phosphatase, prostate
ACPT acid phosphatase, testicular
ACR acrosin
ACVR1B activin A receptor, type IB
ACYP2 acylphosphatase 2, muscle type
ADAM9 ADAM metallopeptidase domain 9
ADAT3 adenosine deaminase, tRNA-specific 3
AFF1 AF4/FMR2 family, member 1
AKAP17A A kinase (PRKA) anchor protein 17A
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
AMH anti-Mullerian hormone
ANKDD1A ankyrin repeat and death domain containing 1A
ANKRD20A3 ankyrin repeat domain 20 family, member A3
ANKRD30BL ankyrin repeat domain 30B-like
ANKRD53 ankyrin repeat domain 53
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
APOD apolipoprotein D
AQP12A aquaporin 12A
AQP12B aquaporin 12B
AQP6 aquaporin 6, kidney specific
ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
ARHGAP22 Rho GTPase activating protein 22
ART5 ADP-ribosyltransferase 5
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome
ASTN1 astrotactin 1
ATN1 atrophin 1
AVPR1A arginine vasopressin receptor 1A
AWAT1 acyl-CoA wax alcohol acyltransferase 1
B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
BCAM basal cell adhesion molecule (Lutheran blood group)
BCL9 B-cell CLL/lymphoma 9
BRD9 bromodomain containing 9
BTBD19 BTB (POZ) domain containing 19
C11ORF95 chromosome 11 open reading frame 95
C14ORF178 chromosome 14 open reading frame 178
C16ORF90 chromosome 16 open reading frame 90
C22ORF24 chromosome 22 open reading frame 24
C2ORF16 chromosome 2 open reading frame 16
C2ORF27A chromosome 2 open reading frame 27A
C2ORF61 chromosome 2 open reading frame 61
C4ORF51 chromosome 4 open reading frame 51
C7ORF33 chromosome 7 open reading frame 33
CABS1 calcium-binding protein, spermatid-specific 1
CACHD1 cache domain containing 1
CBLN3 cerebellin 3 precursor
CCDC136 coiled-coil domain containing 136
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC152 coiled-coil domain containing 152
CCDC36 coiled-coil domain containing 36
CCDC8 coiled-coil domain containing 8
CCDC88B coiled-coil domain containing 88B
CCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)
CD1E CD1e molecule
CD300LD CD300 molecule-like family member d
CDC42BPG CDC42 binding protein kinase gamma (DMPK-like)
CDKN2AIP CDKN2A interacting protein
CES4A carboxylesterase 4A
CFI complement factor I
CHPF chondroitin polymerizing factor
CIC capicua transcriptional repressor
CLDN9 claudin 9
CNTNAP3 contactin associated protein-like 3
COL24A1 collagen, type XXIV, alpha 1
COL6A4P2 collagen, type VI, alpha 4 pseudogene 2
COL9A2 collagen, type IX, alpha 2
COX6B2 cytochrome c oxidase subunit VIb polypeptide 2 (testis)
CPE carboxypeptidase E
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1
CSNK1G2-AS1 CSNK1G2 antisense RNA 1
CTSF cathepsin F
CUL7 cullin 7
CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2
DAP death-associated protein
DCHS2 dachsous cadherin-related 2
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
DKK3 dickkopf WNT signaling pathway inhibitor 3
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11
DPYSL3 dihydropyrimidinase-like 3
DROSHA drosha, ribonuclease type III
DTNA dystrobrevin, alpha
DUPD1 dual specificity phosphatase and pro isomerase domain containing 1
DVL3 dishevelled segment polarity protein 3
EBF4 early B-cell factor 4
ECE1 endothelin converting enzyme 1
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2
EFS embryonal Fyn-associated substrate
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1
ELK3 ELK3, ETS-domain protein (SRF accessory protein 2)
EMID1 EMI domain containing 1
EML3 echinoderm microtubule associated protein like 3
EPC1 enhancer of polycomb homolog 1 (Drosophila)
ETV5 ets variant 5
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM171A1 family with sequence similarity 171, member A1
FAM221B family with sequence similarity 221, member B
FAM41AY1 family with sequence similarity 41, member A, Y-linked 1
FAM41C family with sequence similarity 41, member C
FAM46D family with sequence similarity 46, member D
FAM71E2 family with sequence similarity 71, member E2
FBLN2 fibulin 2
FBXL7 F-box and leucine-rich repeat protein 7
FBXO18 F-box protein, helicase, 18
FBXW12 F-box and WD repeat domain containing 12
FCGRT Fc fragment of IgG, receptor, transporter, alpha
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2
FHL3 four and a half LIM domains 3
FKBP9 FK506 binding protein 9, 63 kDa
FLJ10038 uncharacterized protein FLJ10038
FLJ13224 uncharacterized LOC79857
FLT3 fms-related tyrosine kinase 3
FNDC7 fibronectin type III domain containing 7
FOXD1 forkhead box D1
FOXD4 forkhead box D4
FOXD4L1 forkhead box D4-like 1
FOXD4L5 forkhead box D4-like 5
FOXS1 forkhead box S1
FRAS1 Fraser extracellular matrix complex subunit 1
GABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 1
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GALNT7 polypeptide N-acetylgalactosaminyltransferase 7
GCGR glucagon receptor
GDNF glial cell derived neurotrophic factor
GFRA3 GDNF family receptor alpha 3
GLG1 golgi glycoprotein 1
GOLGA2P3Y golgin A2 pseudogene 3, Y-linked
GOLGA6L5P golgin A6 family-like 5, pseudogene
GPC4 glypican 4
GPR142 G protein-coupled receptor 142
GPR158 G protein-coupled receptor 158
GPR20 G protein-coupled receptor 20
GSTTP1 glutathione S-transferase theta pseudogene 1
HCCAT5 hepatocellular carcinoma associated transcript 5 (non-protein coding)
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HMX3 H6 family homeobox 3
HPCA hippocalcin
HSFX2 heat shock transcription factor family, X linked 2
HSPA1L heat shock 70kDa protein 1-like
IGF1R insulin-like growth factor 1 receptor
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2
IGF2BP2-AS1 IGF2BP2 antisense RNA 1
IGFBP2 insulin-like growth factor binding protein 2, 36kDa
IGSF3 immunoglobulin superfamily, member 3
IKZF2 IKAROS family zinc finger 2 (Helios)
IL34 interleukin 34
INSL5 insulin-like 5
IPW imprinted in Prader-Willi syndrome (non-protein coding)
IQSEC3 IQ motif and Sec7 domain 3
IRF2 interferon regulatory factor 2
IRF2BPL interferon regulatory factor 2 binding protein-like
IRS1 insulin receptor substrate 1
ISLR immunoglobulin superfamily containing leucine-rich repeat
ISLR2 immunoglobulin superfamily containing leucine-rich repeat 2
ITGB5 integrin, beta 5
JMJD8 jumonji domain containing 8
KAT6A K(lysine) acetyltransferase 6A
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KC6 keratoconus gene 6
KCNH5 potassium channel, voltage gated eag related subfamily H, member 5
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNJ5 potassium channel, inwardly rectifying subfamily J, member 5
KCP kielin/chordin-like protein
KDELC2 KDEL (Lys-Asp-Glu-Leu) containing 2
KDM4E lysine (K)-specific demethylase 4E
KIAA1107 KIAA1107
KIAA1217 KIAA1217
KIDINS220 kinase D-interacting substrate, 220kDa
KLHL3 kelch-like family member 3
KRTAP21-2 keratin associated protein 21-2
KRTAP6-3 keratin associated protein 6-3
LAMA5 laminin, alpha 5
LAMP5 lysosomal-associated membrane protein family, member 5
LCAT lecithin-cholesterol acyltransferase
LDLRAP1 low density lipoprotein receptor adaptor protein 1
LGALS2 lectin, galactoside-binding, soluble, 2
LGR5 leucine-rich repeat containing G protein-coupled receptor 5
LINC00167 long intergenic non-protein coding RNA 167
LINC00235 long intergenic non-protein coding RNA 235
LINC00319 long intergenic non-protein coding RNA 319
LINC00323 long intergenic non-protein coding RNA 323
LINC00475 long intergenic non-protein coding RNA 475
LINC01465 long intergenic non-protein coding RNA 1465
LINC01599 long intergenic non-protein coding RNA 1599
LIPH lipase, member H
LOC100129055 cyclin Y-like 1 pseudogene
LOC100272216 uncharacterized LOC100272216
LOC153684 uncharacterized LOC153684
LOC283731 uncharacterized LOC283731
LOC284661 uncharacterized LOC284661
LOC389332 uncharacterized LOC389332
LOC440040 glutamate receptor, metabotropic 5 pseudogene
LOC441454 prothymosin, alpha pseudogene
LOC642852 uncharacterized LOC642852
LOC654342 lymphocyte-specific protein 1 pseudogene
LOC729603 calcineurin-like EF-hand protein 1 pseudogene
LOC90834
LOC91450 uncharacterized LOC91450
LOXL1 lysyl oxidase-like 1
LOXL4 lysyl oxidase-like 4
LRPAP1 low density lipoprotein receptor-related protein associated protein 1
LTBP3 latent transforming growth factor beta binding protein 3
MAGEA5 melanoma antigen family A5
MAGEF1 melanoma antigen family F1
MAGIX MAGI family member, X-linked
MAML2 mastermind-like 2 (Drosophila)
MAN2B2 mannosidase, alpha, class 2B, member 2
MANBA mannosidase, beta A, lysosomal
MAP3K13 mitogen-activated protein kinase kinase kinase 13
MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3
MARCH11 membrane-associated ring finger (C3HC4) 11
MATN1 matrilin 1, cartilage matrix protein
MC5R melanocortin 5 receptor
MCHR2 melanin-concentrating hormone receptor 2
MCTP2 multiple C2 domains, transmembrane 2
MEGF6 multiple EGF-like-domains 6
MEX3D mex-3 RNA binding family member D
MFAP2 microfibrillar-associated protein 2
MFGE8 milk fat globule-EGF factor 8 protein
MMP10 matrix metallopeptidase 10
MMP23B matrix metallopeptidase 23B
MMP27 matrix metallopeptidase 27
MROH1 maestro heat-like repeat family member 1
MROH7 maestro heat-like repeat family member 7
MST1P2 macrophage stimulating 1 (hepatocyte growth factor-like) pseudogene 2
MUC2 mucin 2, oligomeric mucus/gel-forming
MUM1 melanoma associated antigen (mutated) 1
MYH6 myosin, heavy chain 6, cardiac muscle, alpha
MYO15A myosin XVA
MYO15B myosin XVB
MYO3B myosin IIIB
NAGA N-acetylgalactosaminidase, alpha-
NAPSB napsin B aspartic peptidase, pseudogene
NCKAP5L NCK-associated protein 5-like
NCOA1 nuclear receptor coactivator 1
NIPBL Nipped-B homolog (Drosophila)
NKX3-2 NK3 homeobox 2
NLGN4Y neuroligin 4, Y-linked
NMUR2 neuromedin U receptor 2
NOX4 NADPH oxidase 4
NPFFR1 neuropeptide FF receptor 1
NPY neuropeptide Y
NRP2 neuropilin 2
NRXN3 neurexin 3
NTF4 neurotrophin 4
NTN3 netrin 3
NUDT9P1 nudix (nucleoside diphosphate linked moiety X)-type motif 9 pseudogene 1
NUTM2F NUT family member 2F
OBSL1 obscurin-like 1
OR10H4 olfactory receptor, family 10, subfamily H, member 4
OR10Q1 olfactory receptor, family 10, subfamily Q, member 1
OR13C8 olfactory receptor, family 13, subfamily C, member 8
OR1B1 olfactory receptor, family 1, subfamily B, member 1 (gene/pseudogene)
OR2J3 olfactory receptor, family 2, subfamily J, member 3
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene
OR52N1 olfactory receptor, family 52, subfamily N, member 1
OR8S1 olfactory receptor, family 8, subfamily S, member 1
OSTN osteocrin
P3H1 prolyl 3-hydroxylase 1
PAGE2 P antigen family, member 2 (prostate associated)
PAGE2B P antigen family, member 2B
PAK7 p21 protein (Cdc42/Rac)-activated kinase 7
PARL presenilin associated, rhomboid-like
PASD1 PAS domain containing 1
PBXIP1 pre-B-cell leukemia homeobox interacting protein 1
PCDHB10 protocadherin beta 10
PCDHB11 protocadherin beta 11
PCDHB12 protocadherin beta 12
PCDHB14 protocadherin beta 14
PCDHB5 protocadherin beta 5
PCDHGA1 protocadherin gamma subfamily A, 1
PCDHGB5 protocadherin gamma subfamily B, 5
PCNAP1 proliferating cell nuclear antigen pseudogene 1
PDGFC platelet derived growth factor C
PDPN podoplanin
PDXDC2P pyridoxal-dependent decarboxylase domain containing 2, pseudogene
PHLDB1 pleckstrin homology-like domain, family B, member 1
PIAS3 protein inhibitor of activated STAT, 3
PIK3R6 phosphoinositide-3-kinase, regulatory subunit 6
PIP5K1C phosphatidylinositol-4-phosphate 5-kinase, type I, gamma
PKD1 polycystic kidney disease 1 (autosomal dominant)
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive)
PKIB protein kinase (cAMP-dependent, catalytic) inhibitor beta
PLAG1 pleiomorphic adenoma gene 1
PLAGL1 pleiomorphic adenoma gene-like 1
PLBD2 phospholipase B domain containing 2
PLCB4 phospholipase C, beta 4
PLCH2 phospholipase C, eta 2
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1
PLD3 phospholipase D family, member 3
PLD4 phospholipase D family, member 4
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
PLEKHG5 pleckstrin homology domain containing, family G (with RhoGef domain) member 5
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
PLXNA3 plexin A3
PMCHL1 pro-melanin-concentrating hormone-like 1, pseudogene
POM121L9P POM121 transmembrane nucleoporin-like 9, pseudogene
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPP4R1L protein phosphatase 4, regulatory subunit 1-like (pseudogene)
PRKCDBP protein kinase C, delta binding protein
PRKCQ protein kinase C, theta
PRKY protein kinase, Y-linked, pseudogene
PTP4A3 protein tyrosine phosphatase type IVA, member 3
RAB43 RAB43, member RAS oncogene family
RASGEF1C RasGEF domain family, member 1C
RASSF6 Ras association (RalGDS/AF-6) domain family member 6
RCN3 reticulocalbin 3, EF-hand calcium binding domain
REM2 RAS (RAD and GEM)-like GTP binding 2
RERE arginine-glutamic acid dipeptide (RE) repeats
RGPD8 RANBP2-like and GRIP domain containing 8
RHO rhodopsin
RICTOR RPTOR independent companion of MTOR, complex 2
RNASE13 ribonuclease, RNase A family, 13 (non-active)
ROBO3 roundabout, axon guidance receptor, homolog 3 (Drosophila)
RPS15AP10 ribosomal protein S15a pseudogene 10
RUNX1 runt-related transcription factor 1
SCN11A sodium channel, voltage gated, type XI alpha subunit
SDK1 sidekick cell adhesion molecule 1
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
SENP2 SUMO1/sentrin/SMT3 specific peptidase 2
SEPN1 selenoprotein N, 1
SEPT14 septin 14
SETD1B SET domain containing 1B
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
SHC2 SHC (Src homology 2 domain containing) transforming protein 2
SIX4 SIX homeobox 4
SKI SKI proto-oncogene
SKOR1 SKI family transcriptional corepressor 1
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
SLC23A3 solute carrier family 23, member 3
SLC25A34 solute carrier family 25, member 34
SLC26A1 solute carrier family 26 (anion exchanger), member 1
SLC35G5 solute carrier family 35, member G5
SLC37A2 solute carrier family 37 (glucose-6-phosphate transporter), member 2
SLC4A3 solute carrier family 4 (anion exchanger), member 3
SLC5A4 solute carrier family 5 (glucose activated ion channel), member 4
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5
SLC7A13 solute carrier family 7 (anionic amino acid transporter), member 13
SLC9C2 solute carrier family 9, member C2 (putative)
SMIM10L2B small integral membrane protein 10 like 2B
SMIM24 small integral membrane protein 24
SNORD116-4 small nucleolar RNA, C/D box 116-4
SPACA5 sperm acrosome associated 5
SPACA6P sperm acrosome associated 6, pseudogene
SPEF2 sperm flagellar 2
SPEG SPEG complex locus
SPNS3 spinster homolog 3 (Drosophila)
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
SPRED2 sprouty-related, EVH1 domain containing 2
SRPK3 SRSF protein kinase 3
ST20-AS1 ST20 antisense RNA 1
STAB1 stabilin 1
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4
SYNGAP1 synaptic Ras GTPase activating protein 1
SYS1-DBNDD2 SYS1-DBNDD2 readthrough (NMD candidate)
SZT2 seizure threshold 2 homolog (mouse)
TACC1 transforming, acidic coiled-coil containing protein 1
TAS1R3 taste receptor, type 1, member 3
TAS2R1 taste receptor, type 2, member 1
TAS2R3 taste receptor, type 2, member 3
TBC1D14 TBC1 domain family, member 14
TBC1D26 TBC1 domain family, member 26
TBCCD1 TBCC domain containing 1
TEAD3 TEA domain family member 3
TECPR2 tectonin beta-propeller repeat containing 2
TECTA tectorin alpha
TENM1 teneurin transmembrane protein 1
TM2D2 TM2 domain containing 2
TMCO4 transmembrane and coiled-coil domains 4
TMEM240 transmembrane protein 240
TMEM41A transmembrane protein 41A
TNC tenascin C
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TPPP tubulin polymerization promoting protein
TRA2B transformer 2 beta homolog (Drosophila)
TRAPPC3L trafficking protein particle complex 3-like
TRDMT1 tRNA aspartic acid methyltransferase 1
TRIB2 tribbles pseudokinase 2
TRIM50 tripartite motif containing 50
TRIO trio Rho guanine nucleotide exchange factor
TSPEAR-AS2 TSPEAR antisense RNA 2
TTYH3 tweety family member 3
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UBOX5 U-box domain containing 5
UGT1A4 UDP glucuronosyltransferase 1 family, polypeptide A4
UGT3A2 UDP glycosyltransferase 3 family, polypeptide A2
ULBP3 UL16 binding protein 3
UOX urate oxidase, pseudogene
UPP2 uridine phosphorylase 2
USP31 ubiquitin specific peptidase 31
USP49 ubiquitin specific peptidase 49
USP9Y ubiquitin specific peptidase 9, Y-linked
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
VCX variable charge, X-linked
VGLL4 vestigial-like family member 4
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae)
VWA2 von Willebrand factor A domain containing 2
WDR37 WD repeat domain 37
WDTC1 WD and tetratricopeptide repeats 1
WHAMMP3 WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3
WISP3 WNT1 inducible signaling pathway protein 3
WNK1 WNK lysine deficient protein kinase 1
WNT8A wingless-type MMTV integration site family, member 8A
XCR1 chemokine (C motif) receptor 1
XKR5 XK, Kell blood group complex subunit-related family, member 5
YEATS2 YEATS domain containing 2
ZBED1 zinc finger, BED-type containing 1
ZC3H6 zinc finger CCCH-type containing 6
ZDHHC11 zinc finger, DHHC-type containing 11
ZFY zinc finger protein, Y-linked
ZMAT1 zinc finger, matrin-type 1
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF208 zinc finger protein 208
ZNF219 zinc finger protein 219
ZNF229 zinc finger protein 229
ZNF233 zinc finger protein 233
ZNF25 zinc finger protein 25
ZNF362 zinc finger protein 362
ZNF432 zinc finger protein 432
ZNF517 zinc finger protein 517
ZNF555 zinc finger protein 555
ZNF578 zinc finger protein 578
ZNF610 zinc finger protein 610
ZNF677 zinc finger protein 677
ZNF843 zinc finger protein 843
ZNF880 zinc finger protein 880
ZSCAN1 zinc finger and SCAN domain containing 1
ZSCAN18 zinc finger and SCAN domain containing 18