Liver hepatocellular carcinoma_LIHC_TCGA-UB-AA0U-01A-11R-A38B-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

310 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-UB-AA0U-01A-11R-A38B-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCB10 ATP-binding cassette, sub-family B (MDR/TAP), member 10
ADAL adenosine deaminase-like
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16
ADAMTSL3 ADAMTS-like 3
ADCY6 adenylate cyclase 6
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3
AKAP5 A kinase (PRKA) anchor protein 5
AMIGO1 adhesion molecule with Ig-like domain 1
ANKRD26 ankyrin repeat domain 26
ANKRD40 ankyrin repeat domain 40
APLF aprataxin and PNKP like factor
ARPIN actin-related protein 2/3 complex inhibitor
ASB16-AS1 ASB16 antisense RNA 1
ASIC5 acid sensing (proton gated) ion channel family member 5
ATAD2 ATPase family, AAA domain containing 2
ATAD5 ATPase family, AAA domain containing 5
ATP9A ATPase, class II, type 9A
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1
BARD1 BRCA1 associated RING domain 1
BCAP29 B-cell receptor-associated protein 29
BIVM basic, immunoglobulin-like variable motif containing
BLOC1S5 biogenesis of lysosomal organelles complex-1, subunit 5, muted
BMS1P4 BMS1 ribosome biogenesis factor pseudogene 4
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BRIP1 BRCA1 interacting protein C-terminal helicase 1
BRPF3 bromodomain and PHD finger containing, 3
C16ORF90 chromosome 16 open reading frame 90
C17ORF105 chromosome 17 open reading frame 105
C17ORF80 chromosome 17 open reading frame 80
C21ORF58 chromosome 21 open reading frame 58
C22ORF46 chromosome 22 open reading frame 46
C5ORF24 chromosome 5 open reading frame 24
C6ORF89 chromosome 6 open reading frame 89
CASC5 cancer susceptibility candidate 5
CASP2 caspase 2, apoptosis-related cysteine peptidase
CCDC144NL coiled-coil domain containing 144 family, N-terminal like
CCDC163P coiled-coil domain containing 163, pseudogene
CCNE2 cyclin E2
CD1C CD1c molecule
CD1E CD1e molecule
CDC5L cell division cycle 5-like
CDC6 cell division cycle 6
CDC7 cell division cycle 7
CDH15 cadherin 15, type 1, M-cadherin (myotubule)
CDK14 cyclin-dependent kinase 14
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CFAP97 cilia and flagella associated protein 97
CHAF1B chromatin assembly factor 1, subunit B (p60)
CHUK conserved helix-loop-helix ubiquitous kinase
CLPTM1L CLPTM1-like
CMTM6 CKLF-like MARVEL transmembrane domain containing 6
CMTR1 cap methyltransferase 1
COCH cochlin
COL4A4 collagen, type IV, alpha 4
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
CTBP1-AS2 CTBP1 antisense RNA 2 (head to head)
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
CYB5RL cytochrome b5 reductase-like
CYP27C1 cytochrome P450, family 27, subfamily C, polypeptide 1
DCK deoxycytidine kinase
DCLRE1A DNA cross-link repair 1A
DDAH1 dimethylarginine dimethylaminohydrolase 1
DEK DEK proto-oncogene
DENND2C DENN/MADD domain containing 2C
DIP2A DIP2 disco-interacting protein 2 homolog A (Drosophila)
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DONSON downstream neighbor of SON
DOPEY2 dopey family member 2
DPY19L2P2 DPY19L2 pseudogene 2
DSN1 DSN1, MIS12 kinetochore complex component
DTL denticleless E3 ubiquitin protein ligase homolog (Drosophila)
E2F3 E2F transcription factor 3
E2F7 E2F transcription factor 7
E2F8 E2F transcription factor 8
ELOVL2 ELOVL fatty acid elongase 2
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7
ERCC4 excision repair cross-complementation group 4
EVI5 ecotropic viral integration site 5
EXO5 exonuclease 5
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
FAM111B family with sequence similarity 111, member B
FAM171A2 family with sequence similarity 171, member A2
FANCE Fanconi anemia, complementation group E
FBF1 Fas (TNFRSF6) binding factor 1
FBXL19-AS1 FBXL19 antisense RNA 1 (head to head)
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
FKSG29 FKSG29
FLJ37201 tigger transposable element derived 2 pseudogene
FMO2 flavin containing monooxygenase 2 (non-functional)
GATAD1 GATA zinc finger domain containing 1
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GEMIN8P4 gem (nuclear organelle) associated protein 8 pseudogene 4
GJC1 gap junction protein, gamma 1, 45kDa
HCG4B HLA complex group 4B (non-protein coding)
HIST1H1D histone cluster 1, H1d
HMCN1 hemicentin 1
HNF4G hepatocyte nuclear factor 4, gamma
HSF2BP heat shock transcription factor 2 binding protein
ICE1 interactor of little elongation complex ELL subunit 1
ICOSLG inducible T-cell co-stimulator ligand
IFNL2 interferon, lambda 2
INSM2 insulinoma-associated 2
IPP intracisternal A particle-promoted polypeptide
ISM1 isthmin 1, angiogenesis inhibitor
ITSN1 intersectin 1 (SH3 domain protein)
KAZALD1 Kazal-type serine peptidase inhibitor domain 1
KCNC3 potassium channel, voltage gated Shaw related subfamily C, member 3
KCNH4 potassium channel, voltage gated eag related subfamily H, member 4
KCTD20 potassium channel tetramerization domain containing 20
KCTD7 potassium channel tetramerization domain containing 7
KDM1B lysine (K)-specific demethylase 1B
KDM7A lysine (K)-specific demethylase 7A
KIAA1147 KIAA1147
KIF13A kinesin family member 13A
KLHL8 kelch-like family member 8
KLLN killin, p53-regulated DNA replication inhibitor
KNCN kinocilin
KRT27 keratin 27, type I
KRTAP1-5 keratin associated protein 1-5
KRTAP10-12 keratin associated protein 10-12
KRTAP10-3 keratin associated protein 10-3
KRTAP10-4 keratin associated protein 10-4
KRTAP10-6 keratin associated protein 10-6
LINC00235 long intergenic non-protein coding RNA 235
LINC00244 long intergenic non-protein coding RNA 244
LINC01547 long intergenic non-protein coding RNA 1547
LOC100130093 uncharacterized LOC100130093
LOC100134368 uncharacterized LOC100134368
LOC100240734 uncharacterized LOC100240734
LOC284379 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 pseudogene
LOC340017 uncharacterized LOC340017
LOC642852 uncharacterized LOC642852
LRRC14B leucine rich repeat containing 14B
LRRC20 leucine rich repeat containing 20
LRRC3 leucine rich repeat containing 3
LRRC43 leucine rich repeat containing 43
LRRC61 leucine rich repeat containing 61
LTB4R2 leukotriene B4 receptor 2
MAB21L3 mab-21-like 3 (C. elegans)
MACF1 microtubule-actin crosslinking factor 1
MAPK14 mitogen-activated protein kinase 14
MAT2A methionine adenosyltransferase II, alpha
MATN2 matrilin 2
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MCM3AP minichromosome maintenance complex component 3 associated protein
MCM4 minichromosome maintenance complex component 4
MCM6 minichromosome maintenance complex component 6
MDC1 mediator of DNA-damage checkpoint 1
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2
MGC12916 uncharacterized protein MGC12916
MLH3 mutL homolog 3
MMD monocyte to macrophage differentiation-associated
MMP17 matrix metallopeptidase 17 (membrane-inserted)
MRPS10 mitochondrial ribosomal protein S10
MSH2 mutS homolog 2
MSL1 male-specific lethal 1 homolog (Drosophila)
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MTVR2 mouse mammary tumor virus receptor homolog 2
MYO7B myosin VIIB
NBN nibrin
NCAPD3 non-SMC condensin II complex, subunit D3
NCAPG2 non-SMC condensin II complex, subunit G2
NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding)
NEK4 NIMA-related kinase 4
NEU2 sialidase 2 (cytosolic sialidase)
NPAS4 neuronal PAS domain protein 4
NT5DC3 5'-nucleotidase domain containing 3
NTAN1 N-terminal asparagine amidase
NTN3 netrin 3
NUP153 nucleoporin 153kDa
NUTM2A NUT family member 2A
NUTM2D NUT family member 2D
NYAP1 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1
OR10H5 olfactory receptor, family 10, subfamily H, member 5
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR52K1 olfactory receptor, family 52, subfamily K, member 1
OR9A4 olfactory receptor, family 9, subfamily A, member 4
PARP15 poly (ADP-ribose) polymerase family, member 15
PARP6 poly (ADP-ribose) polymerase family, member 6
PAXIP1 PAX interacting (with transcription-activation domain) protein 1
PCNA proliferating cell nuclear antigen
PEX26 peroxisomal biogenesis factor 26
PIGR polymeric immunoglobulin receptor
PKD2L2 polycystic kidney disease 2-like 2
PKDREJ polycystin (PKD) family receptor for egg jelly
PLCE1 phospholipase C, epsilon 1
POFUT1 protein O-fucosyltransferase 1
POLH polymerase (DNA directed), eta
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D
PRKD3 protein kinase D3
PROKR1 prokineticin receptor 1
PRRT2 proline-rich transmembrane protein 2
PTH2R parathyroid hormone 2 receptor
PTPRU protein tyrosine phosphatase, receptor type, U
PXK PX domain containing serine/threonine kinase
RAB23 RAB23, member RAS oncogene family
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic)
RANBP9 RAN binding protein 9
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated)
RASSF3 Ras association (RalGDS/AF-6) domain family member 3
RDM1 RAD52 motif containing 1
REEP1 receptor accessory protein 1
RGPD1 RANBP2-like and GRIP domain containing 1
RHPN1-AS1 RHPN1 antisense RNA 1 (head to head)
RIPPLY3 ripply transcriptional repressor 3
RIT2 Ras-like without CAAX 2
RNF157 ring finger protein 157
RRP1B ribosomal RNA processing 1B
SBF2 SET binding factor 2
SBK1 SH3 domain binding kinase 1
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SEC14L4 SEC14-like 4 (S. cerevisiae)
SENP1 SUMO1/sentrin specific peptidase 1
SEPT11 septin 11
SERINC5 serine incorporator 5
SGMS1 sphingomyelin synthase 1
SHE Src homology 2 domain containing E
SHISA3 shisa family member 3
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC19A1 solute carrier family 19 (folate transporter), member 1
SLC25A40 solute carrier family 25, member 40
SLC26A10 solute carrier family 26, member 10
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1
SLC35G1 solute carrier family 35, member G1
SLC46A1 solute carrier family 46 (folate transporter), member 1
SLK STE20-like kinase
SLX4IP SLX4 interacting protein
SMAD4 SMAD family member 4
SMC3 structural maintenance of chromosomes 3
SMO smoothened, frizzled class receptor
SNORA16A small nucleolar RNA, H/ACA box 16A
SNORA61 small nucleolar RNA, H/ACA box 61
SPDYE2 speedy/RINGO cell cycle regulator family member E2
SPNS3 spinster homolog 3 (Drosophila)
SRPK1 SRSF protein kinase 1
SSH1 slingshot protein phosphatase 1
SSTR2 somatostatin receptor 2
STAG1 stromal antigen 1
STX1B syntaxin 1B
SUMO3 small ubiquitin-like modifier 3
SUZ12 SUZ12 polycomb repressive complex 2 subunit
SYNJ1 synaptojanin 1
SYPL1 synaptophysin-like 1
TCEANC2 transcription elongation factor A (SII) N-terminal and central domain containing 2
TCF19 transcription factor 19
TCP10L2 t-complex 10-like 2
THUMPD1 THUMP domain containing 1
TIAM2 T-cell lymphoma invasion and metastasis 2
TIMELESS timeless circadian clock
TMC7 transmembrane channel-like 7
TMED10P1 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1
TMEM106C transmembrane protein 106C
TMEM145 transmembrane protein 145
TMEM194A transmembrane protein 194A
TMEM209 transmembrane protein 209
TMEM97 transmembrane protein 97
TMEM98 transmembrane protein 98
TMPO thymopoietin
TMTC4 transmembrane and tetratricopeptide repeat containing 4
TMX1 thioredoxin-related transmembrane protein 1
TRAM1 translocation associated membrane protein 1
TRAPPC10 trafficking protein particle complex 10
TRIM10 tripartite motif containing 10
TRIM33 tripartite motif containing 33
TRIM68 tripartite motif containing 68
TRIM78P tripartite motif containing 78, pseudogene
TRIO trio Rho guanine nucleotide exchange factor
TRRAP transformation/transcription domain-associated protein
TSPEAR-AS2 TSPEAR antisense RNA 2
TUBGCP5 tubulin, gamma complex associated protein 5
TULP2 tubby like protein 2
UBE2G2 ubiquitin-conjugating enzyme E2G 2
UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative)
UHRF1 ubiquitin-like with PHD and ring finger domains 1
UHRF1BP1 UHRF1 binding protein 1
UNG uracil-DNA glycosylase
UPK2 uroplakin 2
USP1 ubiquitin specific peptidase 1
USP6NL USP6 N-terminal like
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VSIG10 V-set and immunoglobulin domain containing 10
WAPAL wings apart-like homolog (Drosophila)
WASL Wiskott-Aldrich syndrome-like
WDHD1 WD repeat and HMG-box DNA binding protein 1
WDR76 WD repeat domain 76
WDR90 WD repeat domain 90
WNK4 WNK lysine deficient protein kinase 4
WNT3 wingless-type MMTV integration site family, member 3
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2
ZDHHC6 zinc finger, DHHC-type containing 6
ZFAND4 zinc finger, AN1-type domain 4
ZFHX4 zinc finger homeobox 4
ZFP69 ZFP69 zinc finger protein
ZFP69B ZFP69 zinc finger protein B
ZIC5 Zic family member 5
ZKSCAN2 zinc finger with KRAB and SCAN domains 2
ZKSCAN8 zinc finger with KRAB and SCAN domains 8
ZMYND10 zinc finger, MYND-type containing 10
ZNF252P zinc finger protein 252, pseudogene
ZNF322 zinc finger protein 322
ZNF322P1 zinc finger protein 322 pseudogene 1
ZNF684 zinc finger protein 684
ZNF697 zinc finger protein 697
ZNF713 zinc finger protein 713
ZNF774 zinc finger protein 774
ZWINT ZW10 interacting kinetochore protein

low expression

Symbol Name
GORASP2 golgi reassembly stacking protein 2, 55kDa
OTUD5 OTU deubiquitinase 5