Liver hepatocellular carcinoma_LIHC_TCGA-MI-A75G-01A-11R-A32O-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

365 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-MI-A75G-01A-11R-A32O-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4
ABHD14A abhydrolase domain containing 14A
ABHD16B abhydrolase domain containing 16B
ABTB1 ankyrin repeat and BTB (POZ) domain containing 1
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ACPP acid phosphatase, prostate
ACSS2 acyl-CoA synthetase short-chain family member 2
ACTR3B ARP3 actin-related protein 3 homolog B (yeast)
ACTR5 ARP5 actin-related protein 5 homolog (yeast)
ACY1 aminoacylase 1
ACYP2 acylphosphatase 2, muscle type
ADAM30 ADAM metallopeptidase domain 30
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5
ADAMTSL4 ADAMTS-like 4
ADRB1 adrenoceptor beta 1
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
AGXT alanine-glyoxylate aminotransferase
AHCY adenosylhomocysteinase
ALAS1 5'-aminolevulinate synthase 1
ANKMY1 ankyrin repeat and MYND domain containing 1
ANXA7 annexin A7
APBA3 amyloid beta (A4) precursor protein-binding, family A, member 3
APEH acylaminoacyl-peptide hydrolase
APOE apolipoprotein E
AQP4-AS1 AQP4 antisense RNA 1
AQP7P1 aquaporin 7 pseudogene 1
ARF5 ADP-ribosylation factor 5
ARSG arylsulfatase G
ASB13 ankyrin repeat and SOCS box containing 13
ASIP agouti signaling protein
ASL argininosuccinate lyase
ATP5EP2 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
ATPIF1 ATPase inhibitory factor 1
AVEN apoptosis, caspase activation inhibitor
AZGP1 alpha-2-glycoprotein 1, zinc-binding
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BCL7B B-cell CLL/lymphoma 7B
BET1 Bet1 golgi vesicular membrane trafficking protein
BLCAP bladder cancer associated protein
BMP2 bone morphogenetic protein 2
C11ORF1 chromosome 11 open reading frame 1
C14ORF142 chromosome 14 open reading frame 142
C15ORF43 chromosome 15 open reading frame 43
C15ORF61 chromosome 15 open reading frame 61
C19ORF73 chromosome 19 open reading frame 73
C20ORF24 chromosome 20 open reading frame 24
C3ORF14 chromosome 3 open reading frame 14
C3ORF67 chromosome 3 open reading frame 67
C4ORF45 chromosome 4 open reading frame 45
C6ORF226 chromosome 6 open reading frame 226
C7ORF43 chromosome 7 open reading frame 43
C7ORF55 chromosome 7 open reading frame 55
CADM1 cell adhesion molecule 1
CBLC Cbl proto-oncogene C, E3 ubiquitin protein ligase
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
CCDC174 coiled-coil domain containing 174
CCNH cyclin H
CDK5 cyclin-dependent kinase 5
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3
CGA glycoprotein hormones, alpha polypeptide
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4
CMC1 C-x(9)-C motif containing 1
CNPPD1 cyclin Pas1/PHO80 domain containing 1
COBL cordon-bleu WH2 repeat protein
COX7B cytochrome c oxidase subunit VIIb
CPTP ceramide-1-phosphate transfer protein
CRBN cereblon
CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa
CTSZ cathepsin Z
CUX1 cut-like homeobox 1
CYB561D2 cytochrome b561 family, member D2
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1
CYTH1 cytohesin 1
DACT2 dishevelled-binding antagonist of beta-catenin 2
DAXX death-domain associated protein
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1
DCXR dicarbonyl/L-xylulose reductase
DDX27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
DHCR7 7-dehydrocholesterol reductase
DHRS3 dehydrogenase/reductase (SDR family) member 3
DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30
DIO2 deiodinase, iodothyronine, type II
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
DUSP16 dual specificity phosphatase 16
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
EFCAB5 EF-hand calcium binding domain 5
EIF1B eukaryotic translation initiation factor 1B
ELMOD2 ELMO/CED-12 domain containing 2
ELOVL5 ELOVL fatty acid elongase 5
EMC3 ER membrane protein complex subunit 3
EMC4 ER membrane protein complex subunit 4
EMD emerin
ERC2 ELKS/RAB6-interacting/CAST family member 2
ETFA electron-transfer-flavoprotein, alpha polypeptide
ETHE1 ethylmalonic encephalopathy 1
ETNPPL ethanolamine-phosphate phospho-lyase
F10 coagulation factor X
FABP5P3 fatty acid binding protein 5 pseudogene 3
FAM86DP family with sequence similarity 86, member D, pseudogene
FASN fatty acid synthase
FBXO24 F-box protein 24
FDXACB1 ferredoxin-fold anticodon binding domain containing 1
FMR1 fragile X mental retardation 1
FNDC4 fibronectin type III domain containing 4
FUZ fuzzy planar cell polarity protein
GAS8-AS1 GAS8 antisense RNA 1
GCC1 GRIP and coiled-coil domain containing 1
GDPGP1 GDP-D-glucose phosphorylase 1
GFOD1 glucose-fructose oxidoreductase domain containing 1
GID8 GID complex subunit 8
GLYCTK glycerate kinase
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
GNMT glycine N-methyltransferase
GPRC5C G protein-coupled receptor, class C, group 5, member C
GPX1 glutathione peroxidase 1
GREM2 gremlin 2, DAN family BMP antagonist
GSTK1 glutathione S-transferase kappa 1
GTF2IRD2 GTF2I repeat domain containing 2
GTF2IRD2P1 GTF2I repeat domain containing 2 pseudogene 1
HACL1 2-hydroxyacyl-CoA lyase 1
HCG4B HLA complex group 4B (non-protein coding)
HESX1 HESX homeobox 1
HIGD1A HIG1 hypoxia inducible domain family, member 1A
HIST1H4D histone cluster 1, H4d
HIST1H4J histone cluster 1, H4j
HIST1H4K histone cluster 1, H4k
HMCES 5-hydroxymethylcytosine (hmC) binding, ES cell-specific
HSD11B1 hydroxysteroid (11-beta) dehydrogenase 1
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11
HSD17B14 hydroxysteroid (17-beta) dehydrogenase 14
HYKK hydroxylysine kinase
HYPK huntingtin interacting protein K
ICAM3 intercellular adhesion molecule 3
IFRD2 interferon-related developmental regulator 2
INPP1 inositol polyphosphate-1-phosphatase
INSIG1 insulin induced gene 1
INSM2 insulinoma-associated 2
INSR insulin receptor
IRX4 iroquois homeobox 4
ITIH3 inter-alpha-trypsin inhibitor heavy chain 3
ITM2B integral membrane protein 2B
ITPK1 inositol-tetrakisphosphate 1-kinase
JAGN1 jagunal homolog 1 (Drosophila)
KCNE1 potassium channel, voltage gated subfamily E regulatory beta subunit 1
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8
KEAP1 kelch-like ECH-associated protein 1
KLF15 Kruppel-like factor 15
KLK2 kallikrein-related peptidase 2
KLK3 kallikrein-related peptidase 3
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial)
LCN12 lipocalin 12
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
LGALS4 lectin, galactoside-binding, soluble, 4
LIME1 Lck interacting transmembrane adaptor 1
LOC100131496 uncharacterized LOC100131496
LOC100133920 uncharacterized LOC100133920
LPCAT3 lysophosphatidylcholine acyltransferase 3
LRRC2 leucine rich repeat containing 2
LRRTM4 leucine rich repeat transmembrane neuronal 4
LRWD1 leucine-rich repeats and WD repeat domain containing 1
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha
MARCH2 membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase
MARK4 MAP/microtubule affinity-regulating kinase 4
MEPCE methylphosphate capping enzyme
MOGAT3 monoacylglycerol O-acyltransferase 3
MON1A MON1 secretory trafficking family member A
MOSPD1 motile sperm domain containing 1
MOSPD3 motile sperm domain containing 3
MPLKIP M-phase specific PLK1 interacting protein
MRAP2 melanocortin 2 receptor accessory protein 2
MRPS11 mitochondrial ribosomal protein S11
MRPS36 mitochondrial ribosomal protein S36
MSMB microseminoprotein, beta-
MTFMT mitochondrial methionyl-tRNA formyltransferase
MYO18A myosin XVIIIA
NAP1L2 nucleosome assembly protein 1-like 2
NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha
NDUFAF3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
NKAPL NFKB activating protein-like
NKIRAS1 NFKB inhibitor interacting Ras-like 1
NPM2 nucleophosmin/nucleoplasmin 2
NPTN neuroplastin
NR1D2 nuclear receptor subfamily 1, group D, member 2
NR1I3 nuclear receptor subfamily 1, group I, member 3
NRL neural retina leucine zipper
NSFL1C NSFL1 (p97) cofactor (p47)
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
OAF OAF homolog (Drosophila)
OGFR opioid growth factor receptor
OR10H2 olfactory receptor, family 10, subfamily H, member 2
OR51E2 olfactory receptor, family 51, subfamily E, member 2
OR52R1 olfactory receptor, family 52, subfamily R, member 1 (gene/pseudogene)
OSER1 oxidative stress responsive serine-rich 1
PABPC1L2A poly(A) binding protein, cytoplasmic 1-like 2A
PABPC1L2B poly(A) binding protein, cytoplasmic 1-like 2B
PACRG PARK2 co-regulated
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
PCAT4 prostate cancer associated transcript 4 (non-protein coding)
PCDHA13 protocadherin alpha 13
PCDHB4 protocadherin beta 4
PCGEM1 PCGEM1, prostate-specific transcript (non-protein coding)
PCOLCE2 procollagen C-endopeptidase enhancer 2
PDLIM2 PDZ and LIM domain 2 (mystique)
PDZD11 PDZ domain containing 11
PEMT phosphatidylethanolamine N-methyltransferase
PHF7 PHD finger protein 7
PIN4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4
PIWIL2 piwi-like RNA-mediated gene silencing 2
PMS2P1 postmeiotic segregation increased 2 pseudogene 1
PMS2P2 postmeiotic segregation increased 2 pseudogene 2
PNPLA2 patatin-like phospholipase domain containing 2
POGLUT1 protein O-glucosyltransferase 1
POLB polymerase (DNA directed), beta
PON3 paraoxonase 3
POR P450 (cytochrome) oxidoreductase
POT1 protection of telomeres 1
PPDPF pancreatic progenitor cell differentiation and proliferation factor
PRAMEF10 PRAME family member 10
PRAMEF11 PRAME family member 11
PRAMEF14 PRAME family member 14
PRAMEF4 PRAME family member 4
PRAMEF5 PRAME family member 5
PRAMEF6 PRAME family member 6
PRAMEF9 PRAME family member 9
PRDM9 PR domain containing 9
PRRT3 proline-rich transmembrane protein 3
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2
PSMD6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
PSTK phosphoseryl-tRNA kinase
PTH2R parathyroid hormone 2 receptor
PTPN20 protein tyrosine phosphatase, non-receptor type 20
PTS 6-pyruvoyltetrahydropterin synthase
PXT1 peroxisomal, testis specific 1
PYDC2 pyrin domain containing 2
QRFP pyroglutamylated RFamide peptide
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RARB retinoic acid receptor, beta
RBMY1F RNA binding motif protein, Y-linked, family 1, member F
RHBDD2 rhomboid domain containing 2
RHEB Ras homolog enriched in brain
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1
RLN1 relaxin 1
RMDN3 regulator of microtubule dynamics 3
RNF114 ring finger protein 114
RNF32 ring finger protein 32
RPH3AL rabphilin 3A-like (without C2 domains)
RRBP1 ribosome binding protein 1
RTFDC1 replication termination factor 2 domain containing 1
RUNDC3B RUN domain containing 3B
SBDS Shwachman-Bodian-Diamond syndrome
SCAND1 SCAN domain containing 1
SCAP SREBF chaperone
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SCGB2B2 secretoglobin, family 2B, member 2
SDC1 syndecan 1
SDC4 syndecan 4
SDHAF3 succinate dehydrogenase complex assembly factor 3
SDR39U1 short chain dehydrogenase/reductase family 39U, member 1
SEC13 SEC13 homolog (S. cerevisiae)
SELK selenoprotein K
SELT selenoprotein T
SERINC3 serine incorporator 3
SETD9 SET domain containing 9
SGK2 serum/glucocorticoid regulated kinase 2
SHFM1 split hand/foot malformation (ectrodactyly) type 1
SIX6 SIX homeobox 6
SLC22A18 solute carrier family 22, member 18
SLC22A18AS solute carrier family 22 (organic cation transporter), member 18 antisense
SLC23A3 solute carrier family 23, member 3
SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
SLC2A4RG SLC2A4 regulator
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
SLC35C2 solute carrier family 35 (GDP-fucose transporter), member C2
SLC38A3 solute carrier family 38, member 3
SLC6A12 solute carrier family 6 (neurotransmitter transporter), member 12
SLC7A9 solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
SNORA9 small nucleolar RNA, H/ACA box 9
SPDYE8P speedy/RINGO cell cycle regulator family member E8, pseudogene
SPESP1 sperm equatorial segment protein 1
SPTBN4 spectrin, beta, non-erythrocytic 4
SREBF1 sterol regulatory element binding transcription factor 1
SS18L2 synovial sarcoma translocation gene on chromosome 18-like 2
SSBP3 single stranded DNA binding protein 3
ST20 suppressor of tumorigenicity 20
ST20-AS1 ST20 antisense RNA 1
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2
SYCE1 synaptonemal complex central element protein 1
SYPL1 synaptophysin-like 1
TBC1D17 TBC1 domain family, member 17
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1
TCEA2 transcription elongation factor A (SII), 2
TCFL5 transcription factor-like 5 (basic helix-loop-helix)
TDGF1 teratocarcinoma-derived growth factor 1
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TEKT5 tektin 5
TEX101 testis expressed 101
TEX264 testis expressed 264
THRB thyroid hormone receptor, beta
THUMPD3 THUMP domain containing 3
TMA7 translation machinery associated 7 homolog (S. cerevisiae)
TMEM115 transmembrane protein 115
TMEM120A transmembrane protein 120A
TMEM135 transmembrane protein 135
TMEM230 transmembrane protein 230
TMEM248 transmembrane protein 248
TMEM252 transmembrane protein 252
TMEM50B transmembrane protein 50B
TMUB1 transmembrane and ubiquitin-like domain containing 1
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A
TOM1L2 target of myb1-like 2 (chicken)
TOP1P2 topoisomerase (DNA) I pseudogene 2
TOX2 TOX high mobility group box family member 2
TP53INP2 tumor protein p53 inducible nuclear protein 2
TP53RK TP53 regulating kinase
TPRA1 transmembrane protein, adipocyte asscociated 1
TRAF4 TNF receptor-associated factor 4
TRIP6 thyroid hormone receptor interactor 6
TSKU tsukushi, small leucine rich proteoglycan
TSPAN13 tetraspanin 13
TSTD1 thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
UBE2B ubiquitin-conjugating enzyme E2B
UBE2MP1 ubiquitin-conjugating enzyme E2M pseudogene 1
UBIAD1 UbiA prenyltransferase domain containing 1
UBP1 upstream binding protein 1 (LBP-1a)
ULK3 unc-51 like kinase 3
USP2 ubiquitin specific peptidase 2
USP4 ubiquitin specific peptidase 4 (proto-oncogene)
USP50 ubiquitin specific peptidase 50
WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules
WHAMMP3 WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3
XPC xeroderma pigmentosum, complementation group C
YIPF7 Yip1 domain family, member 7
YTHDF1 YTH N(6)-methyladenosine RNA binding protein 1
ZC3HC1 zinc finger, C3HC-type containing 1
ZFAND6 zinc finger, AN1-type domain 6
ZGPAT zinc finger, CCCH-type with G patch domain
ZNF138 zinc finger protein 138
ZNF274 zinc finger protein 274
ZNF3 zinc finger protein 3
ZNF394 zinc finger protein 394
ZNF425 zinc finger protein 425
ZNF541 zinc finger protein 541
ZNF575 zinc finger protein 575
ZNF624 zinc finger protein 624
ZNF777 zinc finger protein 777
ZNF790 zinc finger protein 790
ZNF823 zinc finger protein 823
ZNF837 zinc finger protein 837
ZSCAN21 zinc finger and SCAN domain containing 21
ZSCAN26 zinc finger and SCAN domain containing 26
ZSWIM3 zinc finger, SWIM-type containing 3

low expression

Symbol Name
MSL1 male-specific lethal 1 homolog (Drosophila)
NF1 neurofibromin 1
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SYNRG synergin, gamma
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa