Liver hepatocellular carcinoma_LIHC_TCGA-K7-A6G5-01A-11R-A311-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

234 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-K7-A6G5-01A-11R-A311-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A1BG-AS1 A1BG antisense RNA 1
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1
ABHD4 abhydrolase domain containing 4
ACSL4 acyl-CoA synthetase long-chain family member 4
ACTR3C ARP3 actin-related protein 3 homolog C (yeast)
ADH1C alcohol dehydrogenase 1C (class I), gamma polypeptide
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
ANG angiogenin, ribonuclease, RNase A family, 5
APCS amyloid P component, serum
ARL8A ADP-ribosylation factor-like 8A
ATG4A autophagy related 4A, cysteine peptidase
ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
ATPIF1 ATPase inhibitory factor 1
B2M beta-2-microglobulin
BAALC brain and acute leukemia, cytoplasmic
BAALC-AS2 BAALC antisense RNA 2
BCAP31 B-cell receptor-associated protein 31
BCKDK branched chain ketoacid dehydrogenase kinase
BDH1 3-hydroxybutyrate dehydrogenase, type 1
BST2 bone marrow stromal cell antigen 2
C17ORF59 chromosome 17 open reading frame 59
C19ORF38 chromosome 19 open reading frame 38
C1GALT1C1 C1GALT1-specific chaperone 1
C20ORF173 chromosome 20 open reading frame 173
CALR calreticulin
CCL15 chemokine (C-C motif) ligand 15
CECR5 cat eye syndrome chromosome region, candidate 5
CELA1 chymotrypsin-like elastase family, member 1
CFHR1 complement factor H-related 1
CHI3L1 chitinase 3-like 1 (cartilage glycoprotein-39)
CHURC1 churchill domain containing 1
CISD2 CDGSH iron sulfur domain 2
CLDN2 claudin 2
CLN5 ceroid-lipofuscinosis, neuronal 5
CLPTM1L CLPTM1-like
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
CNIH1 cornichon family AMPA receptor auxiliary protein 1
COMT catechol-O-methyltransferase
CPNE3 copine III
CRP C-reactive protein, pentraxin-related
CSAD cysteine sulfinic acid decarboxylase
CTSA cathepsin A
CTSZ cathepsin Z
CYB561D2 cytochrome b561 family, member D2
CYB5R3 cytochrome b5 reductase 3
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
DCTD dCMP deaminase
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
DERL1 derlin 1
DGAT1 diacylglycerol O-acyltransferase 1
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
ECHDC3 enoyl CoA hydratase domain containing 3
ECHS1 enoyl CoA hydratase, short chain, 1, mitochondrial
ELOVL6 ELOVL fatty acid elongase 6
EMC10 ER membrane protein complex subunit 10
ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 (putative)
FAM127B family with sequence similarity 127, member B
FAM58A family with sequence similarity 58, member A
FAM99A family with sequence similarity 99, member A (non-protein coding)
FASN fatty acid synthase
FBXL6 F-box and leucine-rich repeat protein 6
FBXO6 F-box protein 6
FGF21 fibroblast growth factor 21
FNDC4 fibronectin type III domain containing 4
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18
GDI1 GDP dissociation inhibitor 1
GOLT1A golgi transport 1A
GPAA1 glycosylphosphatidylinositol anchor attachment 1
GPR108 G protein-coupled receptor 108
GRID1 glutamate receptor, ionotropic, delta 1
GRINA glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
GSDMD gasdermin D
GSS glutathione synthetase
GSTO2 glutathione S-transferase omega 2
GUK1 guanylate kinase 1
H1F0 H1 histone family, member 0
H1FOO H1 histone family, member O, oocyte-specific
HADH hydroxyacyl-CoA dehydrogenase
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HLA-A major histocompatibility complex, class I, A
HLA-B major histocompatibility complex, class I, B
HLA-C major histocompatibility complex, class I, C
HLA-J major histocompatibility complex, class I, J (pseudogene)
HPN hepsin
IDH3G isocitrate dehydrogenase 3 (NAD+) gamma
IFI27 interferon, alpha-inducible protein 27
IFI44 interferon-induced protein 44
IFI6 interferon, alpha-inducible protein 6
IFIT1 interferon-induced protein with tetratricopeptide repeats 1
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFIT5 interferon-induced protein with tetratricopeptide repeats 5
IFITM1 interferon induced transmembrane protein 1
IFITM2 interferon induced transmembrane protein 2
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL5 interleukin 5
IRAK1 interleukin-1 receptor-associated kinase 1
IRF7 interferon regulatory factor 7
IRF9 interferon regulatory factor 9
ISG15 ISG15 ubiquitin-like modifier
ITIH3 inter-alpha-trypsin inhibitor heavy chain 3
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
KRT86 keratin 86, type II
LACTB2 lactamase, beta 2
LAMP2 lysosomal-associated membrane protein 2
LAP3 leucine aminopeptidase 3
LCN1 lipocalin 1
LDHC lactate dehydrogenase C
LGALS3 lectin, galactoside-binding, soluble, 3
LOC643486
LPPR2 lipid phosphate phosphatase-related protein type 2
LRRC20 leucine rich repeat containing 20
LYPLA1 lysophospholipase I
MAD2L2 MAD2 mitotic arrest deficient-like 2 (yeast)
MAN2A2 mannosidase, alpha, class 2A, member 2
MARCH2 membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase
MASP2 mannan-binding lectin serine peptidase 2
MBL2 mannose-binding lectin (protein C) 2, soluble
MCTS1 malignant T cell amplified sequence 1
MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
MOSPD1 motile sperm domain containing 1
MPC1 mitochondrial pyruvate carrier 1
MRPL13 mitochondrial ribosomal protein L13
MRPL49 mitochondrial ribosomal protein L49
MTERF3 mitochondrial transcription termination factor 3
MTFR1 mitochondrial fission regulator 1
MTVR2 mouse mammary tumor virus receptor homolog 2
MVK mevalonate kinase
MX1 MX dynamin-like GTPase 1
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NDUFAF1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 1
NR1D1 nuclear receptor subfamily 1, group D, member 1
NXF4 nuclear RNA export factor 4 pseudogene
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa
OMA1 OMA1 zinc metallopeptidase
OR13J1 olfactory receptor, family 13, subfamily J, member 1
ORMDL2 ORMDL sphingolipid biosynthesis regulator 2
OSGIN2 oxidative stress induced growth inhibitor family member 2
P4HB prolyl 4-hydroxylase, beta polypeptide
PANX2 pannexin 2
PARD6A par-6 family cell polarity regulator alpha
PARP10 poly (ADP-ribose) polymerase family, member 10
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2
PDZK1IP1 PDZK1 interacting protein 1
PEX10 peroxisomal biogenesis factor 10
PEX2 peroxisomal biogenesis factor 2
PIGF phosphatidylinositol glycan anchor biosynthesis, class F
PLEK2 pleckstrin 2
PLS3 plastin 3
POLR2G polymerase (RNA) II (DNA directed) polypeptide G
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
PORCN porcupine homolog (Drosophila)
PQLC1 PQ loop repeat containing 1
PRDX3 peroxiredoxin 3
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3
RAB26 RAB26, member RAS oncogene family
RAB2A RAB2A, member RAS oncogene family
RAB8A RAB8A, member RAS oncogene family
RAMP1 receptor (G protein-coupled) activity modifying protein 1
RARA retinoic acid receptor, alpha
REEP5 receptor accessory protein 5
REEP6 receptor accessory protein 6
REN renin
RER1 retention in endoplasmic reticulum sorting receptor 1
RMDN1 regulator of microtubule dynamics 1
RMDN2 regulator of microtubule dynamics 2
RNF167 ring finger protein 167
RPL36A ribosomal protein L36a
SAR1B secretion associated, Ras related GTPase 1B
SCARNA9L small Cajal body-specific RNA 9-like
SDCBP syndecan binding protein (syntenin)
SERINC2 serine incorporator 2
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
SHISA5 shisa family member 5
SHPK sedoheptulokinase
SIGMAR1 sigma non-opioid intracellular receptor 1
SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
SLC25A11 solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
SLC25A22 solute carrier family 25 (mitochondrial carrier: glutamate), member 22
SLC25A32 solute carrier family 25 (mitochondrial folate carrier), member 32
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
SLC27A4 solute carrier family 27 (fatty acid transporter), member 4
SLC38A8 solute carrier family 38, member 8
SLC51A solute carrier family 51, alpha subunit
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
SNX3 sorting nexin 3
SREBF1 sterol regulatory element binding transcription factor 1
SRP9 signal recognition particle 9kDa
ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4
SURF4 surfeit 4
SUSD3 sushi domain containing 3
SYTL4 synaptotagmin-like 4
TGM2 transglutaminase 2
THEM6 thioesterase superfamily member 6
TLE2 transducin-like enhancer of split 2
TLE6 transducin-like enhancer of split 6
TMBIM1 transmembrane BAX inhibitor motif containing 1
TMCO1 transmembrane and coiled-coil domains 1
TMEM106C transmembrane protein 106C
TMEM150A transmembrane protein 150A
TMEM180 transmembrane protein 180
TMEM187 transmembrane protein 187
TMEM222 transmembrane protein 222
TMEM259 transmembrane protein 259
TMEM59 transmembrane protein 59
TMEM63A transmembrane protein 63A
TMEM68 transmembrane protein 68
TMEM70 transmembrane protein 70
TMEM8A transmembrane protein 8A
TRAM1 translocation associated membrane protein 1
TRIQK triple QxxK/R motif containing
TRMT10C tRNA methyltransferase 10 homolog C (S. cerevisiae)
TRUB2 TruB pseudouridine (psi) synthase family member 2
TXNRD2 thioredoxin reductase 2
TYMP thymidine phosphorylase
UBE2A ubiquitin-conjugating enzyme E2A
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2
UBE2W ubiquitin-conjugating enzyme E2W (putative)
USP18 ubiquitin specific peptidase 18
VWA1 von Willebrand factor A domain containing 1
WDR44 WD repeat domain 44
WRB tryptophan rich basic protein
YIF1A Yip1 interacting factor homolog A (S. cerevisiae)
YIPF2 Yip1 domain family, member 2
ZDHHC9 zinc finger, DHHC-type containing 9

low expression

Symbol Name
SF1 splicing factor 1