Liver hepatocellular carcinoma_LIHC_TCGA-ED-A66X-01A-11R-A311-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

458 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-ED-A66X-01A-11R-A311-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5
ACLY ATP citrate lyase
ACP5 acid phosphatase 5, tartrate resistant
ACSL4 acyl-CoA synthetase long-chain family member 4
ACTA1 actin, alpha 1, skeletal muscle
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6
ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif, 7
ADGRA2 adhesion G protein-coupled receptor A2
ADM2 adrenomedullin 2
AFG3L2 AFG3-like AAA ATPase 2
AFP alpha-fetoprotein
AGO2 argonaute RISC catalytic component 2
AGPAT4-IT1 AGPAT4 intronic transcript 1
ALKBH6 alkB, alkylation repair homolog 6 (E. coli)
AMER2 APC membrane recruitment protein 2
ANGEL1 angel homolog 1 (Drosophila)
ANKRD45 ankyrin repeat domain 45
ANTXR1 anthrax toxin receptor 1
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ARHGAP8 Rho GTPase activating protein 8
ARMC1 armadillo repeat containing 1
ART1 ADP-ribosyltransferase 1
ASB16 ankyrin repeat and SOCS box containing 16
ASCL3 achaete-scute family bHLH transcription factor 3
ASPN asporin
ATP13A1 ATPase type 13A1
ATP6V0D2 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
ATXN7L3 ataxin 7-like 3
BEX1 brain expressed, X-linked 1
BEX4 brain expressed, X-linked 4
BMF Bcl2 modifying factor
BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1
C11ORF45 chromosome 11 open reading frame 45
C15ORF39 chromosome 15 open reading frame 39
C16ORF92 chromosome 16 open reading frame 92
C17ORF107 chromosome 17 open reading frame 107
C19ORF44 chromosome 19 open reading frame 44
C1ORF106 chromosome 1 open reading frame 106
C1ORF210 chromosome 1 open reading frame 210
C22ORF15 chromosome 22 open reading frame 15
C22ORF29 chromosome 22 open reading frame 29
CACUL1 CDK2-associated, cullin domain 1
CALHM2 calcium homeostasis modulator 2
CAPG capping protein (actin filament), gelsolin-like
CC2D2B coiled-coil and C2 domain containing 2B
CCDC120 coiled-coil domain containing 120
CCDC81 coiled-coil domain containing 81
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCNB3 cyclin B3
CCNJ cyclin J
CCR6 chemokine (C-C motif) receptor 6
CD68 CD68 molecule
CDCP1 CUB domain containing protein 1
CDK7 cyclin-dependent kinase 7
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma
CEP192 centrosomal protein 192kDa
CEP250 centrosomal protein 250kDa
CEP72 centrosomal protein 72kDa
CEP76 centrosomal protein 76kDa
CHD7 chromodomain helicase DNA binding protein 7
CHMP1B charged multivesicular body protein 1B
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CHUK conserved helix-loop-helix ubiquitous kinase
CLDN20 claudin 20
CLDN7 claudin 7
COL10A1 collagen, type X, alpha 1
COL1A1 collagen, type I, alpha 1
COL1A2 collagen, type I, alpha 2
COL3A1 collagen, type III, alpha 1
COL4A2 collagen, type IV, alpha 2
COL5A1 collagen, type V, alpha 1
COL5A2 collagen, type V, alpha 2
COL8A1 collagen, type VIII, alpha 1
COLGALT1 collagen beta(1-O)galactosyltransferase 1
CPXM1 carboxypeptidase X (M14 family), member 1
CSRNP2 cysteine-serine-rich nuclear protein 2
CST2 cystatin SA
CTC1 CTS telomere maintenance complex component 1
CTHRC1 collagen triple helix repeat containing 1
CTPS2 CTP synthase 2
CTSH cathepsin H
CXCL16 chemokine (C-X-C motif) ligand 16
CYFIP1 cytoplasmic FMR1 interacting protein 1
DACT1 dishevelled-binding antagonist of beta-catenin 1
DACT3 dishevelled-binding antagonist of beta-catenin 3
DCTPP1 dCTP pyrophosphatase 1
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21
DGKQ diacylglycerol kinase, theta 110kDa
DHRS7 dehydrogenase/reductase (SDR family) member 7
DHX33 DEAH (Asp-Glu-Ala-His) box polypeptide 33
DLAT dihydrolipoamide S-acetyltransferase
DLGAP1 discs, large (Drosophila) homolog-associated protein 1
DNMBP dynamin binding protein
DOC2B double C2-like domains, beta
DOCK6 dedicator of cytokinesis 6
DOPEY1 dopey family member 1
DPEP2 dipeptidase 2
DUSP8 dual specificity phosphatase 8
EDNRA endothelin receptor type A
EIF3C eukaryotic translation initiation factor 3, subunit C
ELL3 elongation factor RNA polymerase II-like 3
EMILIN2 elastin microfibril interfacer 2
ENAH enabled homolog (Drosophila)
EPB41L2 erythrocyte membrane protein band 4.1-like 2
EPPK1 epiplakin 1
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
ERICH5 glutamate-rich 5
ESRP1 epithelial splicing regulatory protein 1
EXOC6 exocyst complex component 6
FAM109B family with sequence similarity 109, member B
FAM132A family with sequence similarity 132, member A
FAM210A family with sequence similarity 210, member A
FAM35A family with sequence similarity 35, member A
FAM45A family with sequence similarity 45, member A
FAM45B family with sequence similarity 45, member A pseudogene
FAM71C family with sequence similarity 71, member C
FAM83G family with sequence similarity 83, member G
FAP fibroblast activation protein, alpha
FAR2 fatty acyl CoA reductase 2
FBN1 fibrillin 1
FBXL19 F-box and leucine-rich repeat protein 19
FBXL19-AS1 FBXL19 antisense RNA 1 (head to head)
FBXO22 F-box protein 22
FER1L4 fer-1-like family member 4, pseudogene (functional)
FER1L6 fer-1-like family member 6
FIG4 FIG4 phosphoinositide 5-phosphatase
FIGNL2 fidgetin-like 2
FLCN folliculin
FLJ16779 uncharacterized LOC100192386
FNDC1 fibronectin type III domain containing 1
FNTA farnesyltransferase, CAAX box, alpha
FPR3 formyl peptide receptor 3
FRAT2 frequently rearranged in advanced T-cell lymphomas 2
FUT2 fucosyltransferase 2 (secretor status included)
GAK cyclin G associated kinase
GAL3ST4 galactose-3-O-sulfotransferase 4
GALK2 galactokinase 2
GDPD1 glycerophosphodiester phosphodiesterase domain containing 1
GGT1 gamma-glutamyltransferase 1
GJA5 gap junction protein, alpha 5, 40kDa
GLUD2 glutamate dehydrogenase 2
GORAB golgin, RAB6-interacting
GPATCH1 G patch domain containing 1
GPC3 glypican 3
GPR160 G protein-coupled receptor 160
GPR35 G protein-coupled receptor 35
GRAMD1A GRAM domain containing 1A
GRHL2 grainyhead-like 2 (Drosophila)
GTF2H2C GTF2H2 family member C
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa
GYLTL1B glycosyltransferase-like 1B
HACD3 3-hydroxyacyl-CoA dehydratase 3
HEPH hephaestin
HEYL hes-related family bHLH transcription factor with YRPW motif-like
HGSNAT heparan-alpha-glucosaminide N-acetyltransferase
HID1 HID1 domain containing
HIST1H2BH histone cluster 1, H2bh
HIST1H2BI histone cluster 1, H2bi
HOMER1 homer scaffolding protein 1
HOOK3 hook microtubule-tethering protein 3
HPS1 Hermansky-Pudlak syndrome 1
HS3ST2 heparan sulfate (glucosamine) 3-O-sulfotransferase 2
HSH2D hematopoietic SH2 domain containing
HSPG2 heparan sulfate proteoglycan 2
HTRA3 HtrA serine peptidase 3
HTT huntingtin
IFI30 interferon, gamma-inducible protein 30
IGF2 insulin-like growth factor 2
IGF2-AS IGF2 antisense RNA
IGLL1 immunoglobulin lambda-like polypeptide 1
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
IL22 interleukin 22
IL4R interleukin 4 receptor
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2
IMPG1 interphotoreceptor matrix proteoglycan 1
IPW imprinted in Prader-Willi syndrome (non-protein coding)
IRF2BP2 interferon regulatory factor 2 binding protein 2
ISLR2 immunoglobulin superfamily containing leucine-rich repeat 2
ITGA11 integrin, alpha 11
ITPK1-AS1 ITPK1 antisense RNA 1
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3
JADE2 jade family PHD finger 2
JPH1 junctophilin 1
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KDF1 keratinocyte differentiation factor 1
KDM5B lysine (K)-specific demethylase 5B
KDM6B lysine (K)-specific demethylase 6B
KERA keratocan
KIAA0100 KIAA0100
KIAA0556 KIAA0556
KIAA0586 KIAA0586
KIAA1919 KIAA1919
KIF1C kinesin family member 1C
KIF21B kinesin family member 21B
KIRREL kin of IRRE like (Drosophila)
KLHL34 kelch-like family member 34
KLHL6 kelch-like family member 6
KRT23 keratin 23, type I
KRT36 keratin 36, type I
KRT85 keratin 85, type II
KRTAP5-1 keratin associated protein 5-1
KSR2 kinase suppressor of ras 2
L3MBTL4 l(3)mbt-like 4 (Drosophila)
LAPTM4B lysosomal protein transmembrane 4 beta
LBR lamin B receptor
LCN8 lipocalin 8
LDLRAD4 low density lipoprotein receptor class A domain containing 4
LINC00319 long intergenic non-protein coding RNA 319
LINGO1 leucine rich repeat and Ig domain containing 1
LOC100134868 uncharacterized LOC100134868
LOC283731 uncharacterized LOC283731
LOC284379 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 pseudogene
LOC653786 otoancorin pseudogene
LRFN3 leucine rich repeat and fibronectin type III domain containing 3
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae)
LSR lipolysis stimulated lipoprotein receptor
LZTS1 leucine zipper, putative tumor suppressor 1
MAGED1 melanoma antigen family D1
MAGED4 melanoma antigen family D4
MAGED4B melanoma antigen family D4B
MAGEL2 melanoma antigen family L2
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene)
MAP7D2 MAP7 domain containing 2
MAPK13 mitogen-activated protein kinase 13
MAPK3 mitogen-activated protein kinase 3
MAS1 MAS1 proto-oncogene, G protein-coupled receptor
MDFI MyoD family inhibitor
MEG3 maternally expressed 3 (non-protein coding)
MEIOB meiosis specific with OB domains
METTL24 methyltransferase like 24
MFSD7 major facilitator superfamily domain containing 7
MGC12916 uncharacterized protein MGC12916
MGC15885 uncharacterized protein MGC15885
MINK1 misshapen-like kinase 1
MIOX myo-inositol oxygenase
MMP17 matrix metallopeptidase 17 (membrane-inserted)
MMP8 matrix metallopeptidase 8
MORF4L1 mortality factor 4 like 1
MPPE1 metallophosphoesterase 1
MROH1 maestro heat-like repeat family member 1
MRPL30 mitochondrial ribosomal protein L30
MSR1 macrophage scavenger receptor 1
MTFR1 mitochondrial fission regulator 1
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
MTMR7 myotubularin related protein 7
MUC20 mucin 20, cell surface associated
MX2 MX dynamin-like GTPase 2
MYBBP1A MYB binding protein (P160) 1a
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric
MYL12B myosin, light chain 12B, regulatory
MYO1D myosin ID
MYO6 myosin VI
MYOM1 myomesin 1
MYOZ1 myozenin 1
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma
NBPF15 neuroblastoma breakpoint family, member 15
NBPF9 neuroblastoma breakpoint family, member 9
NCOA3 nuclear receptor coactivator 3
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NEK8 NIMA-related kinase 8
NEURL4 neuralized E3 ubiquitin protein ligase 4
NIPAL2 NIPA-like domain containing 2
NLRX1 NLR family member X1
NREP neuronal regeneration related protein
NRIP2 nuclear receptor interacting protein 2
OR2A14 olfactory receptor, family 2, subfamily A, member 14
OR3A1 olfactory receptor, family 3, subfamily A, member 1
OR51E1 olfactory receptor, family 51, subfamily E, member 1
OR7A5 olfactory receptor, family 7, subfamily A, member 5
OR7E91P olfactory receptor, family 7, subfamily E, member 91 pseudogene
OVOL1 ovo-like zinc finger 1
PAK6 p21 protein (Cdc42/Rac)-activated kinase 6
PBOV1 prostate and breast cancer overexpressed 1
PCGF3 polycomb group ring finger 3
PDCD2L programmed cell death 2-like
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1
PEAK1 pseudopodium-enriched atypical kinase 1
PEG3 paternally expressed 3
PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
PHYH phytanoyl-CoA 2-hydroxylase
PIK3R5 phosphoinositide-3-kinase, regulatory subunit 5
PIWIL3 piwi-like RNA-mediated gene silencing 3
PLA2G4F phospholipase A2, group IVF
PLD2 phospholipase D2
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
POM121L4P POM121 transmembrane nucleoporin-like 4 pseudogene
POSTN periostin, osteoblast specific factor
PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PPP4R1 protein phosphatase 4, regulatory subunit 1
PPY2P pancreatic polypeptide 2, pseudogene
PRAM1 PML-RARA regulated adaptor molecule 1
PRSS16 protease, serine, 16 (thymus)
PRSS35 protease, serine, 35
PRSS48 protease, serine, 48
PRSS55 protease, serine, 55
PSAP prosaposin
PSMG2 proteasome (prosome, macropain) assembly chaperone 2
PTK6 protein tyrosine kinase 6
PTPN20 protein tyrosine phosphatase, non-receptor type 20
PTPRO protein tyrosine phosphatase, receptor type, O
PWAR5 Prader Willi/Angelman region RNA 5
PWARSN Prader Willi/Angelman region RNA, SNRPN neighbor
PWWP2B PWWP domain containing 2B
PXDN peroxidasin
RAB19 RAB19, member RAS oncogene family
RAB25 RAB25, member RAS oncogene family
RAB27A RAB27A, member RAS oncogene family
RAB3B RAB3B, member RAS oncogene family
RALBP1 ralA binding protein 1
RANGAP1 Ran GTPase activating protein 1
RAP1GAP2 RAP1 GTPase activating protein 2
RDH10 retinol dehydrogenase 10 (all-trans)
RETN resistin
RHPN2 rhophilin, Rho GTPase binding protein 2
RNF170 ring finger protein 170
RNMT RNA (guanine-7-) methyltransferase
RPAP1 RNA polymerase II associated protein 1
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1
RPS6KL1 ribosomal protein S6 kinase-like 1
S100A14 S100 calcium binding protein A14
SAA3P serum amyloid A3 pseudogene
SCARF2 scavenger receptor class F, member 2
SCG3 secretogranin III
SCRIB scribbled planar cell polarity protein
SDCBP2 syndecan binding protein (syntenin) 2
SECTM1 secreted and transmembrane 1
SEH1L SEH1-like (S. cerevisiae)
SEPHS2 selenophosphate synthetase 2
SEPT7P9 septin 7 pseudogene 9
SERAC1 serine active site containing 1
SFRP4 secreted frizzled-related protein 4
SGSM2 small G protein signaling modulator 2
SHISA2 shisa family member 2
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5
SLC20A2 solute carrier family 20 (phosphate transporter), member 2
SLC25A42 solute carrier family 25, member 42
SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2
SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1
SLC38A9 solute carrier family 38, member 9
SLC41A1 solute carrier family 41 (magnesium transporter), member 1
SLC44A2 solute carrier family 44 (choline transporter), member 2
SLC45A4 solute carrier family 45, member 4
SLC50A1 solute carrier family 50 (sugar efflux transporter), member 1
SLC52A1 solute carrier family 52 (riboflavin transporter), member 1
SLC6A11 solute carrier family 6 (neurotransmitter transporter), member 11
SLC9A3 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3
SMAD5 SMAD family member 5
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SNORD115-26 small nucleolar RNA, C/D box 115-26
SNORD116-28 small nucleolar RNA, C/D box 116-28
SNORD116-4 small nucleolar RNA, C/D box 116-4
SNRPN small nuclear ribonucleoprotein polypeptide N
SNURF SNRPN upstream reading frame
SOWAHD sosondowah ankyrin repeat domain family member D
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPEM1 spermatid maturation 1
SPINT1 serine peptidase inhibitor, Kunitz type 1
SQLE squalene epoxidase
SRCIN1 SRC kinase signaling inhibitor 1
SSC5D scavenger receptor cysteine rich family, 5 domains
ST14 suppression of tumorigenicity 14 (colon carcinoma)
SULF1 sulfatase 1
SUN3 Sad1 and UNC84 domain containing 3
SYNE4 spectrin repeat containing, nuclear envelope family member 4
TACC2 transforming, acidic coiled-coil containing protein 2
TARBP1 TAR (HIV-1) RNA binding protein 1
TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3
TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
TBC1D12 TBC1 domain family, member 12
TCEAL8 transcription elongation factor A (SII)-like 8
THAP8 THAP domain containing 8
THBS2 thrombospondin 2
THOC1 THO complex 1
THSD7B thrombospondin, type I, domain containing 7B
TIAM2 T-cell lymphoma invasion and metastasis 2
TM6SF1 transmembrane 6 superfamily member 1
TMC4 transmembrane channel-like 4
TMED3 transmembrane emp24 protein transport domain containing 3
TMEM102 transmembrane protein 102
TMEM119 transmembrane protein 119
TMEM125 transmembrane protein 125
TMEM150B transmembrane protein 150B
TMEM180 transmembrane protein 180
TMEM213 transmembrane protein 213
TMEM38A transmembrane protein 38A
TMEM62 transmembrane protein 62
TMEM63A transmembrane protein 63A
TNK1 tyrosine kinase, non-receptor, 1
TNN tenascin N
TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1
TREM2 triggering receptor expressed on myeloid cells 2
TRIM48 tripartite motif containing 48
TRIM51 tripartite motif-containing 51
TRIM71 tripartite motif containing 71, E3 ubiquitin protein ligase
TRMT44 tRNA methyltransferase 44 homolog (S. cerevisiae)
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TSPY26P testis specific protein, Y-linked 26, pseudogene
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
TSSK6 testis-specific serine kinase 6
TUBB8 tubulin, beta 8 class VIII
UBR5 ubiquitin protein ligase E3 component n-recognin 5
ULK2 unc-51 like autophagy activating kinase 2
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)
USP44 ubiquitin specific peptidase 44
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VASH1 vasohibin 1
VAT1 vesicle amine transport 1
WDR62 WD repeat domain 62
WNT3 wingless-type MMTV integration site family, member 3
WSCD1 WSC domain containing 1
XPO6 exportin 6
YES1 YES proto-oncogene 1, Src family tyrosine kinase
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
ZBED4 zinc finger, BED-type containing 4
ZIM2 zinc finger, imprinted 2
ZKSCAN3 zinc finger with KRAB and SCAN domains 3
ZNF124 zinc finger protein 124
ZNF165 zinc finger protein 165
ZNF232 zinc finger protein 232
ZNF251 zinc finger protein 251
ZNF292 zinc finger protein 292
ZNF48 zinc finger protein 48
ZNF514 zinc finger protein 514
ZNF518A zinc finger protein 518A
ZNF552 zinc finger protein 552
ZNF555 zinc finger protein 555
ZNF565 zinc finger protein 565
ZNF566 zinc finger protein 566
ZNF587 zinc finger protein 587
ZNF589 zinc finger protein 589
ZNF592 zinc finger protein 592
ZNF623 zinc finger protein 623
ZNF624 zinc finger protein 624
ZNF665 zinc finger protein 665
ZNF695 zinc finger protein 695
ZNF70 zinc finger protein 70
ZNF701 zinc finger protein 701
ZNF710 zinc finger protein 710
ZNF761 zinc finger protein 761
ZNF765 zinc finger protein 765
ZNF77 zinc finger protein 77
ZNF786 zinc finger protein 786
ZNF792 zinc finger protein 792
ZNF8 zinc finger protein 8
ZNF813 zinc finger protein 813
ZNF853 zinc finger protein 853
ZNF91 zinc finger protein 91
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1
ZSCAN2 zinc finger and SCAN domain containing 2
ZZEF1 zinc finger, ZZ-type with EF-hand domain 1

low expression

Symbol Name
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant