Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NI-01A-11R-A27V-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

269 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NI-01A-11R-A27V-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AASS aminoadipate-semialdehyde synthase
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6
ABCA8 ATP-binding cassette, sub-family A (ABC1), member 8
ABCA9 ATP-binding cassette, sub-family A (ABC1), member 9
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4
ABCC6P1 ATP-binding cassette, sub-family C, member 6 pseudogene 1 (functional)
ACSM2B acyl-CoA synthetase medium-chain family member 2B
ADAM20 ADAM metallopeptidase domain 20
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide
AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene
AGMO alkylglycerol monooxygenase
AKAP13 A kinase (PRKA) anchor protein 13
AKR1D1 aldo-keto reductase family 1, member D1
ALAD aminolevulinate dehydratase
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ANGPTL3 angiopoietin-like 3
ANO1 anoctamin 1, calcium activated chloride channel
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1
APBB3 amyloid beta (A4) precursor protein-binding, family B, member 3
APOH apolipoprotein H (beta-2-glycoprotein I)
ARNT aryl hydrocarbon receptor nuclear translocator
ARPP19 cAMP-regulated phosphoprotein, 19kDa
ASTE1 asteroid homolog 1 (Drosophila)
ATP11C ATPase, class VI, type 11C
ATP13A3 ATPase type 13A3
BAHD1 bromo adjacent homology domain containing 1
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
BCAR4 breast cancer anti-estrogen resistance 4 (non-protein coding)
BCAS3 breast carcinoma amplified sequence 3
BCORP1 BCL6 corepressor pseudogene 1
BDH1 3-hydroxybutyrate dehydrogenase, type 1
BHMT betaine--homocysteine S-methyltransferase
BLID BH3-like motif containing, cell death inducer
C12ORF54 chromosome 12 open reading frame 54
C12ORF71 chromosome 12 open reading frame 71
C17ORF102 chromosome 17 open reading frame 102
C1ORF101 chromosome 1 open reading frame 101
CA2 carbonic anhydrase II
CALD1 caldesmon 1
CALML4 calmodulin-like 4
CAPS2 calcyphosine 2
CARD17 caspase recruitment domain family, member 17
CARD8 caspase recruitment domain family, member 8
CASD1 CAS1 domain containing 1
CCDC126 coiled-coil domain containing 126
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC148 coiled-coil domain containing 148
CD1D CD1d molecule
CDADC1 cytidine and dCMP deaminase domain containing 1
CENPC centromere protein C
CEP120 centrosomal protein 120kDa
CHN2 chimerin 2
CLC Charcot-Leyden crystal galectin
CLDN16 claudin 16
CLDN20 claudin 20
CLPTM1L CLPTM1-like
CLRN1 clarin 1
CLUHP3 clustered mitochondria (cluA/CLU1) homolog pseudogene 3
CNKSR3 CNKSR family member 3
COBLL1 cordon-bleu WH2 repeat protein-like 1
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)
COL4A4 collagen, type IV, alpha 4
COX11 COX11 cytochrome c oxidase copper chaperone
CPED1 cadherin-like and PC-esterase domain containing 1
CTAGE1 cutaneous T-cell lymphoma-associated antigen 1
CTSO cathepsin O
CYLC2 cylicin, basic protein of sperm head cytoskeleton 2
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
CYP4F3 cytochrome P450, family 4, subfamily F, polypeptide 3
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1
CYTH1 cytohesin 1
DCAF17 DDB1 and CUL4 associated factor 17
DCAF6 DDB1 and CUL4 associated factor 6
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1
DHRS1 dehydrogenase/reductase (SDR family) member 1
DHRS12 dehydrogenase/reductase (SDR family) member 12
DIO2 deiodinase, iodothyronine, type II
DLG1 discs, large homolog 1 (Drosophila)
DMXL1 Dmx-like 1
DNAAF1 dynein, axonemal, assembly factor 1
DNAH6 dynein, axonemal, heavy chain 6
DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9
DPP4 dipeptidyl-peptidase 4
ECHDC2 enoyl CoA hydratase domain containing 2
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
ERBB4 erb-b2 receptor tyrosine kinase 4
ERN1 endoplasmic reticulum to nucleus signaling 1
ESR1 estrogen receptor 1
ETNPPL ethanolamine-phosphate phospho-lyase
EVA1A eva-1 homolog A (C. elegans)
FAM124B family with sequence similarity 124B
FAM181A-AS1 FAM181A antisense RNA 1
FAM214A family with sequence similarity 214, member A
FAM221B family with sequence similarity 221, member B
FAM47C family with sequence similarity 47, member C
FBXL17 F-box and leucine-rich repeat protein 17
FMO3 flavin containing monooxygenase 3
FNDC3A fibronectin type III domain containing 3A
FNDC5 fibronectin type III domain containing 5
FOXD4L6 forkhead box D4-like 6
FRMD4B FERM domain containing 4B
FYTTD1 forty-two-three domain containing 1
GALNT15 polypeptide N-acetylgalactosaminyltransferase 15
GEN1 GEN1 Holliday junction 5' flap endonuclease
GLCCI1 glucocorticoid induced 1
GLIPR1L2 GLI pathogenesis-related 1 like 2
GOLGA6B golgin A6 family, member B
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
GSAP gamma-secretase activating protein
GSG1L GSG1-like
GSTK1 glutathione S-transferase kappa 1
GTF2IRD2 GTF2I repeat domain containing 2
GTF2IRD2P1 GTF2I repeat domain containing 2 pseudogene 1
HELZ helicase with zinc finger
HLF hepatic leukemia factor
HORMAD2 HORMA domain containing 2
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase
IDO2 indoleamine 2,3-dioxygenase 2
IFNLR1 interferon, lambda receptor 1
ING3 inhibitor of growth family, member 3
INSIG1 insulin induced gene 1
IVD isovaleryl-CoA dehydrogenase
IYD iodotyrosine deiodinase
JMY junction mediating and regulatory protein, p53 cofactor
KIAA0825 KIAA0825
KIAA0895 KIAA0895
KIF27 kinesin family member 27
KLHDC10 kelch domain containing 10
KLHL33 kelch-like family member 33
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KRCC1 lysine-rich coiled-coil 1
KRT86 keratin 86, type II
KRTAP1-3 keratin associated protein 1-3
KRTAP5-4 keratin associated protein 5-4
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial)
LGI1 leucine-rich, glioma inactivated 1
LINC00597 long intergenic non-protein coding RNA 597
LINC01565 long intergenic non-protein coding RNA 1565
LOC100132215 uncharacterized LOC100132215
LOC283856 uncharacterized LOC283856
LOC645752 golgin A6 family, member A pseudogene
LOC728024 chromosome X open reading frame 56 pseudogene
LOC728323 uncharacterized LOC728323
LOC728989 phosphodiesterase 4D interacting protein pseudogene
LPA lipoprotein, Lp(a)
LRFN5 leucine rich repeat and fibronectin type III domain containing 5
LSMEM1 leucine-rich single-pass membrane protein 1
MAPK6 mitogen-activated protein kinase 6
MBL2 mannose-binding lectin (protein C) 2, soluble
MFSD1 major facilitator superfamily domain containing 1
MFSD9 major facilitator superfamily domain containing 9
MICALCL MICAL C-terminal like
MLIP muscular LMNA-interacting protein
MTMR10 myotubularin related protein 10
MYNN myoneurin
N4BP2L1 NEDD4 binding protein 2-like 1
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
NEK10 NIMA-related kinase 10
NHSL2 NHS-like 2
NMD3 NMD3 ribosome export adaptor
NOL4 nucleolar protein 4
NPAS3 neuronal PAS domain protein 3
NR1I2 nuclear receptor subfamily 1, group I, member 2
NR3C2 nuclear receptor subfamily 3, group C, member 2
NT5DC1 5'-nucleotidase domain containing 1
NUP62CL nucleoporin 62kDa C-terminal like
OBP2B odorant binding protein 2B
OPA1 optic atrophy 1 (autosomal dominant)
OR13C2 olfactory receptor, family 13, subfamily C, member 2
OR13C3 olfactory receptor, family 13, subfamily C, member 3
OR13C5 olfactory receptor, family 13, subfamily C, member 5
OR13F1 olfactory receptor, family 13, subfamily F, member 1
OR2L13 olfactory receptor, family 2, subfamily L, member 13
OR52W1 olfactory receptor, family 52, subfamily W, member 1
OSBPL11 oxysterol binding protein-like 11
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PHC3 polyhomeotic homolog 3 (Drosophila)
PIK3C2G phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma
PLIN5 perilipin 5
POLB polymerase (DNA directed), beta
PON1 paraoxonase 1
PPP1R1C protein phosphatase 1, regulatory (inhibitor) subunit 1C
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PRR18 proline rich 18
PRSS48 protease, serine, 48
PTPN4 protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
RANBP10 RAN binding protein 10
RBAK RB-associated KRAB zinc finger
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit
RGAG4 retrotransposon gag domain containing 4
RHOU ras homolog family member U
RHPN2 rhophilin, Rho GTPase binding protein 2
RNPC3 RNA-binding region (RNP1, RRM) containing 3
RORA RAR-related orphan receptor A
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase
RSPH4A radial spoke head 4 homolog A (Chlamydomonas)
RTP1 receptor (chemosensory) transporter protein 1
SATB1 SATB homeobox 1
SBDSP1 Shwachman-Bodian-Diamond syndrome pseudogene 1
SCN2A sodium channel, voltage gated, type II alpha subunit
SDS serine dehydratase
SELE selectin E
SELENBP1 selenium binding protein 1
SELT selenoprotein T
SENP2 SUMO1/sentrin/SMT3 specific peptidase 2
SERP1 stress-associated endoplasmic reticulum protein 1
SH3BP4 SH3-domain binding protein 4
SIAH2 siah E3 ubiquitin protein ligase 2
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6
SLC17A4 solute carrier family 17, member 4
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
SLC46A3 solute carrier family 46, member 3
SLC51A solute carrier family 51, alpha subunit
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SMIM14 small integral membrane protein 14
SNORA59B small nucleolar RNA, H/ACA box 59B
SNORA5C small nucleolar RNA, H/ACA box 5C
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
SORBS2 sorbin and SH3 domain containing 2
SPATA3 spermatogenesis associated 3
SPINK9 serine peptidase inhibitor, Kazal type 9
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1
SSFA2 sperm specific antigen 2
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
SUGT1P3 SUGT1 pseudogene 3
SUN1 Sad1 and UNC84 domain containing 1
SYCE1 synaptonemal complex central element protein 1
TAT tyrosine aminotransferase
TF transferrin
TOM1L1 target of myb1 (chicken)-like 1
TPK1 thiamin pyrophosphokinase 1
TPRG1 tumor protein p63 regulated 1
TRIM4 tripartite motif containing 4
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TRPC5 transient receptor potential cation channel, subfamily C, member 5
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TSKU tsukushi, small leucine rich proteoglycan
TSPAN16 tetraspanin 16
TTTY1B testis-specific transcript, Y-linked 1B (non-protein coding)
TUBE1 tubulin, epsilon 1
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1
UBA5 ubiquitin-like modifier activating enzyme 5
UBTFL1 upstream binding transcription factor, RNA polymerase I-like 1
UBXN10 UBX domain protein 10
UGT2B10 UDP glucuronosyltransferase 2 family, polypeptide B10
UGT2B15 UDP glucuronosyltransferase 2 family, polypeptide B15
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28
UGT2B4 UDP glucuronosyltransferase 2 family, polypeptide B4
UGT2B7 UDP glucuronosyltransferase 2 family, polypeptide B7
USP12 ubiquitin specific peptidase 12
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae)
VWA8 von Willebrand factor A domain containing 8
WDPCP WD repeat containing planar cell polarity effector
WEE2 WEE1 homolog 2 (S. pombe)
XDH xanthine dehydrogenase
XRN1 5'-3' exoribonuclease 1
ZC3H13 zinc finger CCCH-type containing 13
ZNF181 zinc finger protein 181
ZNF385B zinc finger protein 385B
ZNF425 zinc finger protein 425
ZNF441 zinc finger protein 441
ZNF680 zinc finger protein 680
ZRANB1 zinc finger, RAN-binding domain containing 1