Liver hepatocellular carcinoma_LIHC_TCGA-CC-A3MC-01A-11R-A22L-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

427 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-CC-A3MC-01A-11R-A22L-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A4GALT alpha 1,4-galactosyltransferase
ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9
ACO2 aconitase 2, mitochondrial
ACVRL1 activin A receptor type II-like 1
ADA adenosine deaminase
ADAM15 ADAM metallopeptidase domain 15
ADAR adenosine deaminase, RNA-specific
ADGRG2 adhesion G protein-coupled receptor G2
ADGRL1 adhesion G protein-coupled receptor L1
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3
AIDA axin interactor, dorsalization associated
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase)
AKR1B10 aldo-keto reductase family 1, member B10 (aldose reductase)
AKR1B15 aldo-keto reductase family 1, member B15
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALG11 ALG11, alpha-1,2-mannosyltransferase
ALOX5 arachidonate 5-lipoxygenase
ALPK3 alpha-kinase 3
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
APCS amyloid P component, serum
APOA1BP apolipoprotein A-I binding protein
ARAP3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11
ARNT aryl hydrocarbon receptor nuclear translocator
ASB16 ankyrin repeat and SOCS box containing 16
ASCL3 achaete-scute family bHLH transcription factor 3
ASPH aspartate beta-hydroxylase
ASPHD2 aspartate beta-hydroxylase domain containing 2
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
ATP9B ATPase, class II, type 9B
ATXN10 ataxin 10
AURKA aurora kinase A
BAK1 BCL2-antagonist/killer 1
BCAN brevican
BCL2L13 BCL2-like 13 (apoptosis facilitator)
BID BH3 interacting domain death agonist
BLZF1 basic leucine zipper nuclear factor 1
BPGM 2,3-bisphosphoglycerate mutase
BPIFC BPI fold containing family C
BRSK1 BR serine/threonine kinase 1
BRSK2 BR serine/threonine kinase 2
BTNL8 butyrophilin-like 8
BVES blood vessel epicardial substance
C11ORF53 chromosome 11 open reading frame 53
C19ORF57 chromosome 19 open reading frame 57
C1ORF27 chromosome 1 open reading frame 27
C1ORF43 chromosome 1 open reading frame 43
C1ORF61 chromosome 1 open reading frame 61
C2ORF80 chromosome 2 open reading frame 80
C5ORF30 chromosome 5 open reading frame 30
CA12 carbonic anhydrase XII
CABYR calcium binding tyrosine-(Y)-phosphorylation regulated
CACNA1S calcium channel, voltage-dependent, L type, alpha 1S subunit
CARD6 caspase recruitment domain family, member 6
CCDC64 coiled-coil domain containing 64
CCNE2 cyclin E2
CCT3 chaperonin containing TCP1, subunit 3 (gamma)
CD109 CD109 molecule
CD24 CD24 molecule
CD99L2 CD99 molecule-like 2
CELF4 CUGBP, Elav-like family member 4
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CEP170P1 centrosomal protein 170kDa pseudogene 1
CERS2 ceramide synthase 2
CES1 carboxylesterase 1
CES1P1 carboxylesterase 1 pseudogene 1
CHAC2 ChaC, cation transport regulator homolog 2 (E. coli)
CHAF1B chromatin assembly factor 1, subunit B (p60)
CHML choroideremia-like (Rab escort protein 2)
CHST1 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
CKMT1A creatine kinase, mitochondrial 1A
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant
COPA coatomer protein complex, subunit alpha
COX6A2 cytochrome c oxidase subunit VIa polypeptide 2
CPLX2 complexin 2
CPTP ceramide-1-phosphate transfer protein
CREG1 cellular repressor of E1A-stimulated genes 1
CRISP1 cysteine-rich secretory protein 1
CRTC2 CREB regulated transcription coactivator 2
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CTAGE4 CTAGE family, member 4
CTAGE6 CTAGE family, member 6
CTAGE9 CTAGE family, member 9
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa
CTSA cathepsin A
CTSS cathepsin S
CXXC1 CXXC finger protein 1
CXXC5 CXXC finger protein 5
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
DAP3 death associated protein 3
DCAF8 DDB1 and CUL4 associated factor 8
DEDD death effector domain containing
DENND4B DENN/MADD domain containing 4B
DESI1 desumoylating isopeptidase 1
DHRS7B dehydrogenase/reductase (SDR family) member 7B
DMC1 DNA meiotic recombinase 1
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5
DTL denticleless E3 ubiquitin protein ligase homolog (Drosophila)
DUSP5P1 dual specificity phosphatase 5 pseudogene 1
E2F2 E2F transcription factor 2
E2F3 E2F transcription factor 3
EFNA3 ephrin-A3
EGF epidermal growth factor
ENAH enabled homolog (Drosophila)
ENAM enamelin
ENOSF1 enolase superfamily member 1
ENSA endosulfine alpha
EPB41L3 erythrocyte membrane protein band 4.1-like 3
EPHB1 EPH receptor B1
EPRS glutamyl-prolyl-tRNA synthetase
ERAP2 endoplasmic reticulum aminopeptidase 2
EXO1 exonuclease 1
F11R F11 receptor
FAHD1 fumarylacetoacetate hydrolase domain containing 1
FAM189B family with sequence similarity 189, member B
FAM71D family with sequence similarity 71, member D
FAM83H family with sequence similarity 83, member H
FASTKD3 FAST kinase domains 3
FGD5 FYVE, RhoGEF and PH domain containing 5
FH fumarate hydratase
FLAD1 flavin adenine dinucleotide synthetase 1
FLJ42627 uncharacterized LOC645644
FLNC filamin C, gamma
FLYWCH1 FLYWCH-type zinc finger 1
FN1 fibronectin 1
FRMD8 FERM domain containing 8
FURIN furin (paired basic amino acid cleaving enzyme)
FZD10 frizzled class receptor 10
GABPB2 GA binding protein transcription factor, beta subunit 2
GAL3ST2 galactose-3-O-sulfotransferase 2
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14
GALNT7 polypeptide N-acetylgalactosaminyltransferase 7
GAS2L1 growth arrest-specific 2 like 1
GATA5 GATA binding protein 5
GATAD2B GATA zinc finger domain containing 2B
GBA glucosidase, beta, acid
GBP2 guanylate binding protein 2, interferon-inducible
GDAP1 ganglioside induced differentiation associated protein 1
GIPC3 GIPC PDZ domain containing family, member 3
GLRX glutaredoxin (thioltransferase)
GMPS guanine monphosphate synthase
GON4L gon-4-like (C. elegans)
GORAB golgin, RAB6-interacting
GPATCH4 G patch domain containing 4
GRAMD4 GRAM domain containing 4
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa
H2AFY H2A histone family, member Y
HAX1 HCLS1 associated protein X-1
HMGB3 high mobility group box 3
HMP19 HMP19 protein
HSPA4 heat shock 70kDa protein 4
HSPA9 heat shock 70kDa protein 9 (mortalin)
ICAM4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)
ICAM5 intercellular adhesion molecule 5, telencephalin
IER3IP1 immediate early response 3 interacting protein 1
IGFBPL1 insulin-like growth factor binding protein-like 1
ILDR2 immunoglobulin-like domain containing receptor 2
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2
IPO9 importin 9
IQGAP3 IQ motif containing GTPase activating protein 3
IQSEC3 IQ motif and Sec7 domain 3
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2
JOSD1 Josephin domain containing 1
JPH1 junctophilin 1
KCTD1 potassium channel tetramerization domain containing 1
KCTD15 potassium channel tetramerization domain containing 15
KCTD3 potassium channel tetramerization domain containing 3
KDELR3 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
KIAA0232 KIAA0232
KIF21B kinesin family member 21B
KIFAP3 kinesin-associated protein 3
KLF13 Kruppel-like factor 13
KLHL20 kelch-like family member 20
KLHL30 kelch-like family member 30
KRT39 keratin 39, type I
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein
LMF2 lipase maturation factor 2
LMTK3 lemur tyrosine kinase 3
LOC100132111 uncharacterized LOC100132111
LOC100133920 uncharacterized LOC100133920
LOC285629 uncharacterized LOC285629
LOC388955 PRELI domain-containing protein 1, mitochondrial pseudogene
LRP11 low density lipoprotein receptor-related protein 11
LY96 lymphocyte antigen 96
LYNX1 Ly6/neurotoxin 1
LYPD5 LY6/PLAUR domain containing 5
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1
MAN2A2 mannosidase, alpha, class 2A, member 2
MAPK11 mitogen-activated protein kinase 11
MAPK12 mitogen-activated protein kinase 12
MAPK8IP2 mitogen-activated protein kinase 8 interacting protein 2
MAPK9 mitogen-activated protein kinase 9
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2
MCM4 minichromosome maintenance complex component 4
MCM5 minichromosome maintenance complex component 5
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic
MEF2D myocyte enhancer factor 2D
METTL18 methyltransferase like 18
MGST3 microsomal glutathione S-transferase 3
MIEF1 mitochondrial elongation factor 1
MIOX myo-inositol oxygenase
MPC2 mitochondrial pyruvate carrier 2
MPPE1 metallophosphoesterase 1
MPZ myelin protein zero
MROH6 maestro heat-like repeat family member 6
MRPL24 mitochondrial ribosomal protein L24
MSC musculin
MST1R macrophage stimulating 1 receptor
MSTO1 misato 1, mitochondrial distribution and morphology regulator
MUC13 mucin 13, cell surface associated
MYCBPAP MYCBP associated protein
MYO19 myosin XIX
NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit
NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit
NARS asparaginyl-tRNA synthetase
NCAM1 neural cell adhesion molecule 1
NCAPH2 non-SMC condensin II complex, subunit H2
NCKIPSD NCK interacting protein with SH3 domain
NCR2 natural cytotoxicity triggering receptor 2
NCSTN nicastrin
NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NGB neuroglobin
NIT1 nitrilase 1
NLRP9 NLR family, pyrin domain containing 9
NOMO1 NODAL modulator 1
NOMO2 NODAL modulator 2
NPTN neuroplastin
NPTXR neuronal pentraxin receptor
NQO1 NAD(P)H dehydrogenase, quinone 1
NR1D1 nuclear receptor subfamily 1, group D, member 1
NRG2 neuregulin 2
NRN1 neuritin 1
NRSN2 neurensin 2
NSL1 NSL1, MIS12 kinetochore complex component
NTN3 netrin 3
NUP50 nucleoporin 50kDa
NUTM2G NUT family member 2G
OAZ3 ornithine decarboxylase antizyme 3
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
ODF1 outer dense fiber of sperm tails 1
OPLAH 5-oxoprolinase (ATP-hydrolysing)
OPRL1 opiate receptor-like 1
OR10J3 olfactory receptor, family 10, subfamily J, member 3
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2
P2RX6 purinergic receptor P2X, ligand gated ion channel, 6
PAQR4 progestin and adipoQ receptor family member IV
PATE2 prostate and testis expressed 2
PCBP3 poly(rC) binding protein 3
PCNA proliferating cell nuclear antigen
PDLIM4 PDZ and LIM domain 4
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1
PEA15 phosphoprotein enriched in astrocytes 15
PEX19 peroxisomal biogenesis factor 19
PHAX phosphorylated adaptor for RNA export
PI4KB phosphatidylinositol 4-kinase, catalytic, beta
PIGR polymeric immunoglobulin receptor
PIGT phosphatidylinositol glycan anchor biosynthesis, class T
PIM3 Pim-3 proto-oncogene, serine/threonine kinase
PIPSL PIP5K1A and PSMD4-like, pseudogene
PITX1 paired-like homeodomain 1
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PLEC plectin
PLXNB2 plexin B2
PMM2 phosphomannomutase 2
POGK pogo transposable element with KRAB domain
POPDC3 popeye domain containing 3
PPFIA3 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
PPIP5K1 diphosphoinositol pentakisphosphate kinase 1
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme
PPY2P pancreatic polypeptide 2, pseudogene
PRCC papillary renal cell carcinoma (translocation-associated)
PRDX6 peroxiredoxin 6
PRG4 proteoglycan 4
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PROP1 PROP paired-like homeobox 1
PRRG3 proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
PSEN2 presenilin 2
PSMB4 proteasome (prosome, macropain) subunit, beta type, 4
PSME4 proteasome (prosome, macropain) activator subunit 4
PSTPIP2 proline-serine-threonine phosphatase interacting protein 2
PTBP2 polypyrimidine tract binding protein 2
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C)
PYCARD PYD and CARD domain containing
PYDC1 PYD (pyrin domain) containing 1
RAB15 RAB15, member RAS oncogene family
RAB40C RAB40C, member RAS oncogene family
RADIL Ras association and DIL domains
RAP1GAP RAP1 GTPase activating protein
RDH10 retinol dehydrogenase 10 (all-trans)
RFX5 regulatory factor X, 5 (influences HLA class II expression)
RGS14 regulator of G-protein signaling 14
RGS19 regulator of G-protein signaling 19
RHBDL1 rhomboid, veinlet-like 1 (Drosophila)
RHOF ras homolog family member F (in filopodia)
RIMS3 regulating synaptic membrane exocytosis 3
RIT1 Ras-like without CAAX 1
RNF213 ring finger protein 213
ROM1 retinal outer segment membrane protein 1
RPP25 ribonuclease P/MRP 25kDa subunit
RRAGD Ras-related GTP binding D
RTN4R reticulon 4 receptor
RUSC1 RUN and SH3 domain containing 1
S100A16 S100 calcium binding protein A16
SBF1 SET binding factor 1
SCAMP3 secretory carrier membrane protein 3
SCNM1 sodium channel modifier 1
SCO2 SCO2 cytochrome c oxidase assembly protein
SCUBE1 signal peptide, CUB domain, EGF-like 1
SCYL3 SCY1-like 3 (S. cerevisiae)
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
SDK1 sidekick cell adhesion molecule 1
SEPT3 septin 3
SEPT5 septin 5
SERHL serine hydrolase-like (pseudogene)
SF3B4 splicing factor 3b, subunit 4, 49kDa
SHC1 SHC (Src homology 2 domain containing) transforming protein 1
SHE Src homology 2 domain containing E
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3
SLC16A9 solute carrier family 16, member 9
SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17
SLC25A18 solute carrier family 25 (glutamate carrier), member 18
SLC25A44 solute carrier family 25, member 44
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1
SLC35A4 solute carrier family 35, member A4
SLC37A1 solute carrier family 37 (glucose-6-phosphate transporter), member 1
SLC39A1 solute carrier family 39 (zinc transporter), member 1
SLC46A1 solute carrier family 46 (folate transporter), member 1
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SLC9A3 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3
SLPI secretory leukocyte peptidase inhibitor
SMAD2 SMAD family member 2
SMG5 SMG5 nonsense mediated mRNA decay factor
SNAPIN SNAP-associated protein
SNX27 sorting nexin family member 27
SPDYE7P speedy/RINGO cell cycle regulator family member E7, pseudogene
SPTSSA serine palmitoyltransferase, small subunit A
SQSTM1 sequestosome 1
SRPK3 SRSF protein kinase 3
STIM1 stromal interaction molecule 1
SYNGR1 synaptogyrin 1
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1
TADA1 transcriptional adaptor 1
TAGLN2 transgelin 2
TBC1D24 TBC1 domain family, member 24
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)
TBX1 T-box 1
TCAF2 TRPM8 channel-associated factor 2
TCF20 transcription factor 20 (AR1)
TCN2 transcobalamin II
TELO2 telomere maintenance 2
TFAP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)
THEM4 thioesterase superfamily member 4
THEM5 thioesterase superfamily member 5
TIMM21 translocase of inner mitochondrial membrane 21 homolog (yeast)
TIPRL TOR signaling pathway regulator
TMC5 transmembrane channel-like 5
TMCO1 transmembrane and coiled-coil domains 1
TMEM11 transmembrane protein 11
TMEM164 transmembrane protein 164
TMEM179 transmembrane protein 179
TMEM229B transmembrane protein 229B
TMEM81 transmembrane protein 81
TMPRSS3 transmembrane protease, serine 3
TNFAIP8L3 tumor necrosis factor, alpha-induced protein 8-like 3
TNFRSF25 tumor necrosis factor receptor superfamily, member 25
TNIP1 TNFAIP3 interacting protein 1
TNNI1 troponin I type 1 (skeletal, slow)
TOMM40L translocase of outer mitochondrial membrane 40 homolog (yeast)-like
TONSL tonsoku-like, DNA repair protein
TOX thymocyte selection-associated high mobility group box
TPGS2 tubulin polyglutamylase complex subunit 2
TPM3 tropomyosin 3
TRIM25 tripartite motif containing 25
TRIM54 tripartite motif containing 54
TTLL12 tubulin tyrosine ligase-like family member 12
TUBB7P tubulin, beta 7, pseudogene
TUBBP5 tubulin, beta pseudogene 5
TULP1 tubby like protein 1
TXNL1 thioredoxin-like 1
TYMP thymidine phosphorylase
UBAP2L ubiquitin associated protein 2-like
UBD ubiquitin D
UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1
UCK2 uridine-cytidine kinase 2
UFC1 ubiquitin-fold modifier conjugating enzyme 1
UGT1A7 UDP glucuronosyltransferase 1 family, polypeptide A7
UGT1A9 UDP glucuronosyltransferase 1 family, polypeptide A9
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
USF1 upstream transcription factor 1
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)
USP22 ubiquitin specific peptidase 22
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VASH2 vasohibin 2
VDAC1 voltage-dependent anion channel 1
VNN1 vanin 1
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae)
VSIG10L V-set and immunoglobulin domain containing 10 like
WDR53 WD repeat domain 53
WT1 Wilms tumor 1
XPR1 xenotropic and polytropic retrovirus receptor 1
YY1AP1 YY1 associated protein 1
ZBTB41 zinc finger and BTB domain containing 41
ZBTB7B zinc finger and BTB domain containing 7B
ZC3HAV1 zinc finger CCCH-type, antiviral 1
ZHX1 zinc fingers and homeoboxes 1
ZMYM6 zinc finger, MYM-type 6
ZNF483 zinc finger protein 483
ZNF672 zinc finger protein 672
ZNF687 zinc finger protein 687

low expression

Symbol Name
TMEM170A transmembrane protein 170A
TSPYL1 TSPY-like 1
TWISTNB TWIST neighbor