Liver hepatocellular carcinoma_LIHC_TCGA-BD-A3EP-01A-11R-A22L-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

337 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-BD-A3EP-01A-11R-A22L-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARD alanine and arginine rich domain containing protein
ABTB1 ankyrin repeat and BTB (POZ) domain containing 1
ACOXL acyl-CoA oxidase-like
ADAM19 ADAM metallopeptidase domain 19
ADAMTSL2 ADAMTS-like 2
ADGRG5 adhesion G protein-coupled receptor G5
ADGRV1 adhesion G protein-coupled receptor V1
ADPRH ADP-ribosylarginine hydrolase
AICDA activation-induced cytidine deaminase
AK8 adenylate kinase 8
AMER2 APC membrane recruitment protein 2
AMPD1 adenosine monophosphate deaminase 1
AP4S1 adaptor-related protein complex 4, sigma 1 subunit
ARL15 ADP-ribosylation factor-like 15
ASAP1-IT1 ASAP1 intronic transcript 1
ATP2A3 ATPase, Ca++ transporting, ubiquitous
BAG5 BCL2-associated athanogene 5
BCL6B B-cell CLL/lymphoma 6, member B
BLK BLK proto-oncogene, Src family tyrosine kinase
BMF Bcl2 modifying factor
BMX BMX non-receptor tyrosine kinase
BRD7P3 bromodomain containing 7 pseudogene 3
BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
BRS3 bombesin-like receptor 3
BTBD6 BTB (POZ) domain containing 6
C20ORF173 chromosome 20 open reading frame 173
C2CD2L C2CD2-like
C2ORF66 chromosome 2 open reading frame 66
C3ORF30 chromosome 3 open reading frame 30
C3ORF36 chromosome 3 open reading frame 36
C4ORF50 chromosome 4 open reading frame 50
C7ORF72 chromosome 7 open reading frame 72
C9ORF117 chromosome 9 open reading frame 117
CABLES1 Cdk5 and Abl enzyme substrate 1
CAMK1G calcium/calmodulin-dependent protein kinase IG
CC2D2B coiled-coil and C2 domain containing 2B
CCNK cyclin K
CCR7 chemokine (C-C motif) receptor 7
CD19 CD19 molecule
CD1C CD1c molecule
CD1E CD1e molecule
CD200 CD200 molecule
CD22 CD22 molecule
CD27 CD27 molecule
CD28 CD28 molecule
CD37 CD37 molecule
CD79A CD79a molecule, immunoglobulin-associated alpha
CD79B CD79b molecule, immunoglobulin-associated beta
CD83 CD83 molecule
CD93 CD93 molecule
CDRT15 CMT1A duplicated region transcript 15
CEACAM18 carcinoembryonic antigen-related cell adhesion molecule 18
CEP170B centrosomal protein 170B
CGRRF1 cell growth regulator with ring finger domain 1
CHD8 chromodomain helicase DNA binding protein 8
CLEC10A C-type lectin domain family 10, member A
CLEC14A C-type lectin domain family 14, member A
CLEC4F C-type lectin domain family 4, member F
CLEC9A C-type lectin domain family 9, member A
CNGB3 cyclic nucleotide gated channel beta 3
CNR2 cannabinoid receptor 2 (macrophage)
CORO1A coronin, actin binding protein, 1A
CPLX1 complexin 1
CPNE5 copine V
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa
CR2 complement component (3d/Epstein Barr virus) receptor 2
CRP C-reactive protein, pentraxin-related
CTAGE5 CTAGE family, member 5
CXCR4 chemokine (C-X-C motif) receptor 4
CXCR5 chemokine (C-X-C motif) receptor 5
CYTIP cytohesin 1 interacting protein
DCANP1 dendritic cell-associated nuclear protein
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24
DENND3 DENN/MADD domain containing 3
DHH desert hedgehog
DKFZP434H168 uncharacterized LOC26077
DKK2 dickkopf WNT signaling pathway inhibitor 2
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DOCK6 dedicator of cytokinesis 6
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1
EAPP E2F-associated phosphoprotein
EFNB2 ephrin-B2
EVL Enah/Vasp-like
FAM110D family with sequence similarity 110, member D
FAM157A family with sequence similarity 157, member A
FAM178B family with sequence similarity 178, member B
FAM46C family with sequence similarity 46, member C
FAM47C family with sequence similarity 47, member C
FAM53A family with sequence similarity 53, member A
FAM92B family with sequence similarity 92, member B
FBXL22 F-box and leucine-rich repeat protein 22
FBXW12 F-box and WD repeat domain containing 12
FCRL4 Fc receptor-like 4
FCRL5 Fc receptor-like 5
FGF7 fibroblast growth factor 7
FKBP3 FK506 binding protein 3, 25kDa
FLT3 fms-related tyrosine kinase 3
FMNL3 formin-like 3
FOXA1 forkhead box A1
FOXD4L6 forkhead box D4-like 6
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GABRQ gamma-aminobutyric acid (GABA) A receptor, theta
GAGE12D G antigen 12D
GAGE12F G antigen 12F
GAGE13 G antigen 13
GAGE2E G antigen 2E
GAGE4 G antigen 4
GAGE8 G antigen 8
GAK cyclin G associated kinase
GCSAM germinal center-associated, signaling and motility
GJA4 gap junction protein, alpha 4, 37kDa
GJA5 gap junction protein, alpha 5, 40kDa
GMFB glia maturation factor, beta
GMPR2 guanosine monophosphate reductase 2
GNAS-AS1 GNAS antisense RNA 1
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3
GOLGA5 golgin A5
GPR132 G protein-coupled receptor 132
GPR152 G protein-coupled receptor 152
GPR18 G protein-coupled receptor 18
GPR183 G protein-coupled receptor 183
GPR20 G protein-coupled receptor 20
GPR78 G protein-coupled receptor 78
HCRTR1 hypocretin (orexin) receptor 1
HDAC5 histone deacetylase 5
HOXD3 homeobox D3
IL16 interleukin 16
IL1RL2 interleukin 1 receptor-like 2
IL2 interleukin 2
INPP5D inositol polyphosphate-5-phosphatase, 145kDa
IPO4 importin 4
IRAK4 interleukin-1 receptor-associated kinase 4
JAM2 junctional adhesion molecule 2
JSRP1 junctional sarcoplasmic reticulum protein 1
KBTBD8 kelch repeat and BTB (POZ) domain containing 8
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNJ14 potassium channel, inwardly rectifying subfamily J, member 14
KGFLP1 fibroblast growth factor 7 pseudogene
KHNYN KH and NYN domain containing
KIAA0125 KIAA0125
KLC1 kinesin light chain 1
KLHL10 kelch-like family member 10
KLHL6 kelch-like family member 6
KRT27 keratin 27, type I
KRT82 keratin 82, type II
KRTAP1-5 keratin associated protein 1-5
KRTAP5-6 keratin associated protein 5-6
LAX1 lymphocyte transmembrane adaptor 1
LCN1 lipocalin 1
LCN8 lipocalin 8
LDB3 LIM domain binding 3
LHX3 LIM homeobox 3
LINC00028 long intergenic non-protein coding RNA 28
LINC00341 long intergenic non-protein coding RNA 341
LINC01590 long intergenic non-protein coding RNA 1590
LINGO3 leucine rich repeat and Ig domain containing 3
LMO2 LIM domain only 2 (rhombotin-like 1)
LOC148696 uncharacterized LOC148696
LOC221122 uncharacterized LOC221122
LOC401010 nucleolar complex associated 2 homolog (S. cerevisiae) pseudogene
LOC440461 Rho GTPase activating protein 27 pseudogene
LOC494141 solute carrier family 25, member 51 pseudogene
LOC728392 uncharacterized LOC728392
LPPR4 lipid phosphate phosphatase-related protein type 4
LRMP lymphoid-restricted membrane protein
LRP10 low density lipoprotein receptor-related protein 10
LRPAP1 low density lipoprotein receptor-related protein associated protein 1
LRRC10B leucine rich repeat containing 10B
LRRC31 leucine rich repeat containing 31
LRRIQ4 leucine-rich repeats and IQ motif containing 4
LTA lymphotoxin alpha
LY9 lymphocyte antigen 9
LYL1 lymphoblastic leukemia associated hematopoiesis regulator 1
LYZL1 lysozyme-like 1
MAGEA1 melanoma antigen family A1
MAGEA11 melanoma antigen family A11
MAGEA12 melanoma antigen family A12
MAGEA3 melanoma antigen family A3
MAGEA4 melanoma antigen family A4
MAGEA8 melanoma antigen family A8
MAP4K1 mitogen-activated protein kinase kinase kinase kinase 1
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like
MARK3 MAP/microtubule affinity-regulating kinase 3
MEF2B myocyte enhancer factor 2B
MEF2C myocyte enhancer factor 2C
METTL3 methyltransferase like 3
MFAP5 microfibrillar associated protein 5
MICU2 mitochondrial calcium uptake 2
MIXL1 Mix paired-like homeobox
MMRN2 multimerin 2
MOAP1 modulator of apoptosis 1
MPPED2 metallophosphoesterase domain containing 2
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MYH11 myosin, heavy chain 11, smooth muscle
MYL7 myosin, light chain 7, regulatory
NANOS2 nanos homolog 2 (Drosophila)
NBEA neurobeachin
NCR3 natural cytotoxicity triggering receptor 3
NFASC neurofascin
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NGDN neuroguidin, EIF4E binding protein
NIN ninein (GSK3B interacting protein)
NLRP1 NLR family, pyrin domain containing 1
NLRP4 NLR family, pyrin domain containing 4
NOS3 nitric oxide synthase 3 (endothelial cell)
NPAS4 neuronal PAS domain protein 4
NRIP2 nuclear receptor interacting protein 2
NXF5 nuclear RNA export factor 5
NXPH1 neurexophilin 1
OBP2A odorant binding protein 2A
OBP2B odorant binding protein 2B
OGT O-linked N-acetylglucosamine (GlcNAc) transferase
OR14I1 olfactory receptor, family 14, subfamily I, member 1
OR1B1 olfactory receptor, family 1, subfamily B, member 1 (gene/pseudogene)
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR2T5 olfactory receptor, family 2, subfamily T, member 5
OR51B6 olfactory receptor, family 51, subfamily B, member 6
OR51E1 olfactory receptor, family 51, subfamily E, member 1
OR51M1 olfactory receptor, family 51, subfamily M, member 1
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR5B2 olfactory receptor, family 5, subfamily B, member 2
OR5H2 olfactory receptor, family 5, subfamily H, member 2
OR8A1 olfactory receptor, family 8, subfamily A, member 1
ORM2 orosomucoid 2
OSBPL1A oxysterol binding protein-like 1A
OXA1L oxidase (cytochrome c) assembly 1-like
P2RY11 purinergic receptor P2Y, G-protein coupled, 11
PAGE2 P antigen family, member 2 (prostate associated)
PALD1 phosphatase domain containing, paladin 1
PANX3 pannexin 3
PARP2 poly (ADP-ribose) polymerase 2
PATE1 prostate and testis expressed 1
PAX5 paired box 5
PCDH17 protocadherin 17
PCDHA6 protocadherin alpha 6
PCDHAC1 protocadherin alpha subfamily C, 1
PCYOX1L prenylcysteine oxidase 1 like
PHF2P1 PHD finger protein 2 pseudogene 1
PIM2 Pim-2 proto-oncogene, serine/threonine kinase
PLA2G5 phospholipase A2, group V
PLD4 phospholipase D family, member 4
PNOC prepronociceptin
PODXL podocalyxin-like
POTEB POTE ankyrin domain family, member B
POU2AF1 POU class 2 associating factor 1
POU2F2 POU class 2 homeobox 2
PP2D1 protein phosphatase 2C-like domain containing 1
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta
PPP1R13B protein phosphatase 1, regulatory subunit 13B
PPP1R16B protein phosphatase 1, regulatory subunit 16B
PRMT5 protein arginine methyltransferase 5
PRO0611 PRO0611 protein
PRSS37 protease, serine, 37
PSMB5 proteasome (prosome, macropain) subunit, beta type, 5
PTCHD3 patched domain containing 3
PTPRVP protein tyrosine phosphatase, receptor type, V, pseudogene
PTTG2 pituitary tumor-transforming 2
RAB2B RAB2B, member RAS oncogene family
RABGGTA Rab geranylgeranyltransferase, alpha subunit
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic)
RB1 retinoblastoma 1
RBM23 RNA binding motif protein 23
RCOR1 REST corepressor 1
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RFPL4B ret finger protein-like 4B
RGS13 regulator of G-protein signaling 13
RHOH ras homolog family member H
RNF31 ring finger protein 31
RPA4 replication protein A4, 30kDa
RPL21P44 ribosomal protein L21 pseudogene 44
RUNX1-IT1 RUNX1 intronic transcript 1
RUNX3 runt-related transcription factor 3
S1PR4 sphingosine-1-phosphate receptor 4
SAMD14 sterile alpha motif domain containing 14
SAMD7 sterile alpha motif domain containing 7
SCG2 secretogranin II
SCHIP1 schwannomin interacting protein 1
SEBOX SEBOX homeobox
SEC62 SEC62 homolog (S. cerevisiae)
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
SERPINA9 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
SETD3 SET domain containing 3
SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)
SHKBP1 SH3KBP1 binding protein 1
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SNORA16A small nucleolar RNA, H/ACA box 16A
SOCS4 suppressor of cytokine signaling 4
SOX8 SRY (sex determining region Y)-box 8
SPINK2 serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)
SRP54 signal recognition particle 54kDa
SSX8 synovial sarcoma, X breakpoint 8
SWAP70 SWAP switching B-cell complex 70kDa subunit
SYN1 synapsin I
T T, brachyury homolog (mouse)
TAF4B TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa
TAS1R2 taste receptor, type 1, member 2
TAS2R31 taste receptor, type 2, member 31
TBC1D3P2 TBC1 domain family, member 3 pseudogene 2
TCL6 T-cell leukemia/lymphoma 6 (non-protein coding)
TCP11L1 t-complex 11, testis-specific-like 1
TECPR1 tectonin beta-propeller repeat containing 1
TEP1 telomerase-associated protein 1
TESPA1 thymocyte expressed, positive selection associated 1
TEX11 testis expressed 11
TIE1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TLR9 toll-like receptor 9
TM9SF1 transmembrane 9 superfamily member 1
TMEM215 transmembrane protein 215
TMEM243 transmembrane protein 243, mitochondrial
TMEM55B transmembrane protein 55B
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C
TOX4 TOX high mobility group box family member 4
TP53AIP1 tumor protein p53 regulated apoptosis inducing protein 1
TPI1P3 triosephosphate isomerase 1 pseudogene 3
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1
TRAF3 TNF receptor-associated factor 3
TRMT61A tRNA methyltransferase 61A
TSPAN2 tetraspanin 2
TTC5 tetratricopeptide repeat domain 5
UOX urate oxidase, pseudogene
USP11 ubiquitin specific peptidase 11
USP17L2 ubiquitin specific peptidase 17-like family member 2
VASH1 vasohibin 1
VPREB3 pre-B lymphocyte 3
WDR64 WD repeat domain 64
WNT8B wingless-type MMTV integration site family, member 8B
ZC3H12D zinc finger CCCH-type containing 12D
ZNF441 zinc finger protein 441
ZNF556 zinc finger protein 556
ZNF655 zinc finger protein 655