Liver hepatocellular carcinoma_LIHC_TCGA-BC-A3KF-01A-11R-A213-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Liver hepatocellular carcinoma_LIHC (The Cancer Genome Atlas)
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Genes

436 genes with high or low expression in Liver hepatocellular carcinoma_LIHC_TCGA-BC-A3KF-01A-11R-A213-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ABCC6P2 ATP-binding cassette, sub-family C, member 6 pseudogene 2
ABHD13 abhydrolase domain containing 13
ACOT13 acyl-CoA thioesterase 13
ACR acrosin
ACSM2A acyl-CoA synthetase medium-chain family member 2A
ADCK2 aarF domain containing kinase 2
AGMAT agmatine ureohydrolase (agmatinase)
AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1
AHCYL2 adenosylhomocysteinase-like 2
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3
AK2 adenylate kinase 2
AKAP14 A kinase (PRKA) anchor protein 14
AKR1A1 aldo-keto reductase family 1, member A1 (aldehyde reductase)
ALDH3B1 aldehyde dehydrogenase 3 family, member B1
ALDOC aldolase C, fructose-bisphosphate
ALKBH5 AlkB family member 5, RNA demethylase
ALMS1P Alstrom syndrome 1 pseudogene
AMBRA1 autophagy/beclin-1 regulator 1
ANKRD13A ankyrin repeat domain 13A
ANKRD23 ankyrin repeat domain 23
ANKRD33 ankyrin repeat domain 33
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1
APOL5 apolipoprotein L, 5
ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head)
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5
ARIH2OS ariadne homolog 2 opposite strand
ARPIN actin-related protein 2/3 complex inhibitor
ARPP19 cAMP-regulated phosphoprotein, 19kDa
ARRDC4 arrestin domain containing 4
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ASAH2B N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B
ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
ASB7 ankyrin repeat and SOCS box containing 7
ASIC5 acid sensing (proton gated) ion channel family member 5
ATP11A ATPase, class VI, type 11A
ATP11AUN ATP11A upstream neighbor
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2
ATP6V1G2 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
ATP9A ATPase, class II, type 9A
ATPAF2 ATP synthase mitochondrial F1 complex assembly factor 2
ATRNL1 attractin-like 1
BARX1 BARX homeobox 1
BCL2L10 BCL2-like 10 (apoptosis facilitator)
BIVM basic, immunoglobulin-like variable motif containing
BRAP BRCA1 associated protein
BTBD1 BTB (POZ) domain containing 1
C10ORF32 chromosome 10 open reading frame 32
C10ORF67 chromosome 10 open reading frame 67
C12ORF43 chromosome 12 open reading frame 43
C12ORF73 chromosome 12 open reading frame 73
C15ORF27 chromosome 15 open reading frame 27
C1ORF105 chromosome 1 open reading frame 105
C1ORF168 chromosome 1 open reading frame 168
C1ORF210 chromosome 1 open reading frame 210
C22ORF15 chromosome 22 open reading frame 15
C7ORF73 chromosome 7 open reading frame 73
C9ORF66 chromosome 9 open reading frame 66
CA12 carbonic anhydrase XII
CA13 carbonic anhydrase XIII
CABLES2 Cdk5 and Abl enzyme substrate 2
CALML4 calmodulin-like 4
CARKD carbohydrate kinase domain containing
CASR calcium-sensing receptor
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
CCDC120 coiled-coil domain containing 120
CCDC144A coiled-coil domain containing 144A
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCNB3 cyclin B3
CDC14A cell division cycle 14A
CDC16 cell division cycle 16
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK20 cyclin-dependent kinase 20
CDKL2 cyclin-dependent kinase-like 2 (CDC2-related kinase)
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CENPV centromere protein V
CEP290 centrosomal protein 290kDa
CEP83 centrosomal protein 83kDa
CEP85 centrosomal protein 85kDa
CHAMP1 chromosome alignment maintaining phosphoprotein 1
CHPT1 choline phosphotransferase 1
CHSY1 chondroitin sulfate synthase 1
CIAO1 cytosolic iron-sulfur assembly component 1
CIAPIN1 cytokine induced apoptosis inhibitor 1
CIART circadian associated repressor of transcription
CLCN5 chloride channel, voltage-sensitive 5
CLDN19 claudin 19
CLIP1 CAP-GLY domain containing linker protein 1
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant
CLRN1-AS1 CLRN1 antisense RNA 1
CLYBL citrate lyase beta like
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2
COCH cochlin
COL26A1 collagen, type XXVI, alpha 1
COPS3 COP9 signalosome subunit 3
COQ10A coenzyme Q10 homolog A (S. cerevisiae)
CRYAA crystallin, alpha A
CSRP1 cysteine and glycine-rich protein 1
CTAGE1 cutaneous T-cell lymphoma-associated antigen 1
CTAGE6 CTAGE family, member 6
CUBN cubilin (intrinsic factor-cobalamin receptor)
CUL4A cullin 4A
CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1
CYP4Z1 cytochrome P450, family 4, subfamily Z, polypeptide 1
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DCP1B decapping mRNA 1B
DCUN1D2 DCN1, defective in cullin neddylation 1, domain containing 2
DDAH1 dimethylarginine dimethylaminohydrolase 1
DDO D-aspartate oxidase
DET1 de-etiolated homolog 1 (Arabidopsis)
DHDDS dehydrodolichyl diphosphate synthase
DHFR dihydrofolate reductase
DIO1 deiodinase, iodothyronine, type I
DIS3L DIS3 like exosome 3'-5' exoribonuclease
DMBX1 diencephalon/mesencephalon homeobox 1
DNAH12 dynein, axonemal, heavy chain 12
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DNAJC14 DnaJ (Hsp40) homolog, subfamily C, member 14
DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16
DNM1P35 dynamin 1 pseudogene 35
DNMBP-AS1 DNMBP antisense RNA 1
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like
DOCK9 dedicator of cytokinesis 9
DPH6 diphthamine biosynthesis 6
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
DUS4L dihydrouridine synthase 4-like (S. cerevisiae)
EDC3 enhancer of mRNA decapping 3
EFCAB1 EF-hand calcium binding domain 1
EFTUD1 elongation factor Tu GTP binding domain containing 1
EGOT eosinophil granule ontogeny transcript (non-protein coding)
EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa
ELMO2 engulfment and cell motility 2
EPB41L1 erythrocyte membrane protein band 4.1-like 1
ERCC5 excision repair cross-complementation group 5
EVPLL envoplakin-like
F10 coagulation factor X
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FAIM Fas apoptotic inhibitory molecule
FAM213A family with sequence similarity 213, member A
FAM214A family with sequence similarity 214, member A
FAM221B family with sequence similarity 221, member B
FAM76A family with sequence similarity 76, member A
FAM92A1P2 family with sequence similarity 92, member A3
FBXL22 F-box and leucine-rich repeat protein 22
FBXO17 F-box protein 17
FBXO22 F-box protein 22
FBXO27 F-box protein 27
FEM1B fem-1 homolog b (C. elegans)
FER1L5 fer-1-like family member 5
FGD5 FYVE, RhoGEF and PH domain containing 5
FHAD1 forkhead-associated (FHA) phosphopeptide binding domain 1
FLCN folliculin
FMO1 flavin containing monooxygenase 1
FN3K fructosamine 3 kinase
FOXN2 forkhead box N2
FRMPD1 FERM and PDZ domain containing 1
FSCN3 fascin actin-bundling protein 3, testicular
FSD1L fibronectin type III and SPRY domain containing 1-like
GALM galactose mutarotase (aldose 1-epimerase)
GALP galanin-like peptide
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C
GBAS glioblastoma amplified sequence
GDA guanine deaminase
GGACT gamma-glutamylamine cyclotransferase
GID4 GID complex subunit 4
GIT2 G protein-coupled receptor kinase interacting ArfGAP 2
GJC3 gap junction protein, gamma 3, 30.2kDa
GLTP glycolipid transfer protein
GOLGA6C golgin A6 family, member C
GOLGA6D golgin A6 family, member D
GOLGA6L5P golgin A6 family-like 5, pseudogene
GPC5 glypican 5
GPR180 G protein-coupled receptor 180
GPR88 G protein-coupled receptor 88
GRTP1 growth hormone regulated TBC protein 1
GSTA1 glutathione S-transferase alpha 1
GSTA2 glutathione S-transferase alpha 2
GSTA5 glutathione S-transferase alpha 5
GTF2A2 general transcription factor IIA, 2, 12kDa
HENMT1 HEN1 methyltransferase homolog 1 (Arabidopsis)
HESX1 HESX homeobox 1
HIST1H3A histone cluster 1, H3a
HPS3 Hermansky-Pudlak syndrome 3
HSD17B14 hydroxysteroid (17-beta) dehydrogenase 14
HTR1D 5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
HYAL3 hyaluronoglucosaminidase 3
ICE2 interactor of little elongation complex ELL subunit 2
INSC inscuteable homolog (Drosophila)
IRF5 interferon regulatory factor 5
KCTD6 potassium channel tetramerization domain containing 6
KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1
KDF1 keratinocyte differentiation factor 1
KDM4A lysine (K)-specific demethylase 4A
KIAA0391 KIAA0391
KIAA1191 KIAA1191
KITLG KIT ligand
KL klotho
KLHL34 kelch-like family member 34
KLLN killin, p53-regulated DNA replication inhibitor
KRT222 keratin 222, type II
KRTAP21-2 keratin associated protein 21-2
LACTB lactamase, beta
LAMP1 lysosomal-associated membrane protein 1
LARP6 La ribonucleoprotein domain family, member 6
LDHC lactate dehydrogenase C
LGALS2 lectin, galactoside-binding, soluble, 2
LIG4 ligase IV, DNA, ATP-dependent
LINC00161 long intergenic non-protein coding RNA 161
LINC00240 long intergenic non-protein coding RNA 240
LINC00336 long intergenic non-protein coding RNA 336
LINS lines homolog (Drosophila)
LIPC lipase, hepatic
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LNP1 leukemia NUP98 fusion partner 1
LOC100270746 uncharacterized LOC100270746
LOC391322 D-dopachrome tautomerase-like
LOC730101 uncharacterized LOC730101
LRIG3 leucine-rich repeats and immunoglobulin-like domains 3
LRRC61 leucine rich repeat containing 61
LRRC75A leucine rich repeat containing 75A
LRRC75A-AS1 LRRC75A antisense RNA 1
LRRIQ4 leucine-rich repeats and IQ motif containing 4
LYRM1 LYR motif containing 1
LYSMD4 LysM, putative peptidoglycan-binding, domain containing 4
MARVELD3 MARVEL domain containing 3
MAST2 microtubule associated serine/threonine kinase 2
MCF2L MCF.2 cell line derived transforming sequence-like
MED12L mediator complex subunit 12-like
MED9 mediator complex subunit 9
MEP1A meprin A, alpha (PABA peptide hydrolase)
METTL2B methyltransferase like 2B
MIEF2 mitochondrial elongation factor 2
MLIP muscular LMNA-interacting protein
MOGAT3 monoacylglycerol O-acyltransferase 3
MPL MPL proto-oncogene, thrombopoietin receptor
MPRIP myosin phosphatase Rho interacting protein
MTHFS 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
MTSS1L metastasis suppressor 1-like
MYO5C myosin VC
NABP2 nucleic acid binding protein 2
NBPF15 neuroblastoma breakpoint family, member 15
NCMAP noncompact myelin associated protein
NFS1 NFS1 cysteine desulfurase
NIT2 nitrilase family, member 2
NKAPL NFKB activating protein-like
NPM2 nucleophosmin/nucleoplasmin 2
NR0B2 nuclear receptor subfamily 0, group B, member 2
NUTM1 NUT midline carcinoma, family member 1
OR1F2P olfactory receptor, family 1, subfamily F, member 2, pseudogene
OR1G1 olfactory receptor, family 1, subfamily G, member 1
OR1K1 olfactory receptor, family 1, subfamily K, member 1
OR1L6 olfactory receptor, family 1, subfamily L, member 6
OR2A4 olfactory receptor, family 2, subfamily A, member 4
OR2A7 olfactory receptor, family 2, subfamily A, member 7
OSBPL7 oxysterol binding protein-like 7
OTX1 orthodenticle homeobox 1
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PAPL iron/zinc purple acid phosphatase-like protein
PAQR7 progestin and adipoQ receptor family member VII
PARP16 poly (ADP-ribose) polymerase family, member 16
PCCA propionyl CoA carboxylase, alpha polypeptide
PCSK6 proprotein convertase subtilisin/kexin type 6
PDCD7 programmed cell death 7
PER3 period circadian clock 3
PHYH phytanoyl-CoA 2-hydroxylase
PIGL phosphatidylinositol glycan anchor biosynthesis, class L
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
PLD6 phospholipase D family, member 6
PLEKHG7 pleckstrin homology domain containing, family G (with RhoGef domain) member 7
PNPLA4 patatin-like phospholipase domain containing 4
POC1B POC1 centriolar protein B
POP5 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)
PPM1H protein phosphatase, Mg2+/Mn2+ dependent, 1H
PPP4R1L protein phosphatase 4, regulatory subunit 1-like (pseudogene)
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit
PROKR1 prokineticin receptor 1
PROZ protein Z, vitamin K-dependent plasma glycoprotein
PRPSAP2 phosphoribosyl pyrophosphate synthetase-associated protein 2
PRRG2 proline rich Gla (G-carboxyglutamic acid) 2
PRRT3 proline-rich transmembrane protein 3
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2
PSPH phosphoserine phosphatase
RAB22A RAB22A, member RAS oncogene family
RAP2A RAP2A, member of RAS oncogene family
RCAN3 RCAN family member 3
RENBP renin binding protein
REPIN1 replication initiator 1
RFC5 replication factor C (activator 1) 5, 36.5kDa
RFX7 regulatory factor X, 7
RIBC1 RIB43A domain with coiled-coils 1
RIOK3 RIO kinase 3
RITA1 RBPJ interacting and tubulin associated 1
RNF10 ring finger protein 10
RNF111 ring finger protein 111
RNF114 ring finger protein 114
RNF14 ring finger protein 14
RNF8 ring finger protein 8, E3 ubiquitin protein ligase
RPP14 ribonuclease P/MRP 14kDa subunit
RPS2P32 ribosomal protein S2 pseudogene 32
RTN4 reticulon 4
SCN4A sodium channel, voltage gated, type IV alpha subunit
SDCBP2 syndecan binding protein (syntenin) 2
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
SESN2 sestrin 2
SETD6 SET domain containing 6
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SLC15A1 solute carrier family 15 (oligopeptide transporter), member 1
SLC22A7 solute carrier family 22 (organic anion transporter), member 7
SLC25A27 solute carrier family 25, member 27
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
SLC25A41 solute carrier family 25, member 41
SLC25A42 solute carrier family 25, member 42
SLC26A5 solute carrier family 26 (anion exchanger), member 5
SLC28A2 solute carrier family 28 (concentrative nucleoside transporter), member 2
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SLC30A4 solute carrier family 30 (zinc transporter), member 4
SLC34A3 solute carrier family 34 (type II sodium/phosphate cotransporter), member 3
SLC35E3 solute carrier family 35, member E3
SLC35G1 solute carrier family 35, member G1
SLC39A5 solute carrier family 39 (zinc transporter), member 5
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1
SLC43A2 solute carrier family 43 (amino acid system L transporter), member 2
SLC5A10 solute carrier family 5 (sodium/sugar cotransporter), member 10
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9
SLTM SAFB-like, transcription modulator
SMCR8 Smith-Magenis syndrome chromosome region, candidate 8
SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa
SNRPA1 small nuclear ribonucleoprotein polypeptide A'
SNX1 sorting nexin 1
SNX15 sorting nexin 15
SOSTDC1 sclerostin domain containing 1
SPATA1 spermatogenesis associated 1
SPATA31E1 SPATA31 subfamily E, member 1
SPATA6 spermatogenesis associated 6
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome)
SRD5A3 steroid 5 alpha-reductase 3
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1
ST20-AS1 ST20 antisense RNA 1
STK24 serine/threonine kinase 24
STXBP1 syntaxin binding protein 1
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SULT1E1 sulfotransferase family 1E, estrogen-preferring, member 1
SUOX sulfite oxidase
SYPL2 synaptophysin-like 2
TACC2 transforming, acidic coiled-coil containing protein 2
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
TAOK3 TAO kinase 3
TARSL2 threonyl-tRNA synthetase-like 2
TCHP trichoplein, keratin filament binding
TCP10L t-complex 10-like
TCTA T-cell leukemia translocation altered
TEX30 testis expressed 30
THAP10 THAP domain containing 10
TLN2 talin 2
TM2D3 TM2 domain containing 3
TM9SF2 transmembrane 9 superfamily member 2
TMEM104 transmembrane protein 104
TMEM14A transmembrane protein 14A
TMEM150A transmembrane protein 150A
TMEM150B transmembrane protein 150B
TMEM170A transmembrane protein 170A
TMEM19 transmembrane protein 19
TMEM241 transmembrane protein 241
TMEM63B transmembrane protein 63B
TMTC4 transmembrane and tetratricopeptide repeat containing 4
TOM1L2 target of myb1-like 2 (chicken)
TOP3A topoisomerase (DNA) III alpha
TPCN1 two pore segment channel 1
TPI1P2 triosephosphate isomerase 1 pseudogene 2
TPP1 tripeptidyl peptidase I
TPP2 tripeptidyl peptidase II
TRABD2A TraB domain containing 2A
TRHDE thyrotropin-releasing hormone degrading enzyme
TRIB3 tribbles pseudokinase 3
TRIL TLR4 interactor with leucine-rich repeats
TRIM26 tripartite motif containing 26
TRIP4 thyroid hormone receptor interactor 4
TSPAN33 tetraspanin 33
TSSK4 testis-specific serine kinase 4
TTC22 tetratricopeptide repeat domain 22
TTI1 TELO2 interacting protein 1
TTR transthyretin
TUBGCP3 tubulin, gamma complex associated protein 3
UBAC2 UBA domain containing 2
UBB ubiquitin B
UBE2DNL ubiquitin-conjugating enzyme E2D N-terminal like (pseudogene)
UBE2N ubiquitin-conjugating enzyme E2N
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UBXN2B UBX domain protein 2B
ULK3 unc-51 like kinase 3
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
UPK3A uroplakin 3A
URB1-AS1 URB1 antisense RNA 1 (head to head)
USP44 ubiquitin specific peptidase 44
USP6 ubiquitin specific peptidase 6
VIMP VCP-interacting membrane selenoprotein
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae)
VWA9 von Willebrand factor A domain containing 9
WASL Wiskott-Aldrich syndrome-like
WBP1 WW domain binding protein 1
WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules
WIBG within bgcn homolog (Drosophila)
XPNPEP2 X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
XRCC6BP1 XRCC6 binding protein 1
ZDHHC16 zinc finger, DHHC-type containing 16
ZFAND6 zinc finger, AN1-type domain 6
ZIC5 Zic family member 5
ZNF286B zinc finger protein 286B
ZNF287 zinc finger protein 287
ZNF556 zinc finger protein 556
ZNF57 zinc finger protein 57
ZNF609 zinc finger protein 609
ZNF624 zinc finger protein 624
ZNF664 zinc finger protein 664
ZNF747 zinc finger protein 747
ZNF777 zinc finger protein 777
ZNF781 zinc finger protein 781
ZSCAN1 zinc finger and SCAN domain containing 1
ZSWIM2 zinc finger, SWIM-type containing 2
ZYG11A zyg-11 family member A, cell cycle regulator

low expression

Symbol Name
AAMP angio-associated, migratory cell protein
ATG16L1 autophagy related 16-like 1 (S. cerevisiae)
BAG5 BCL2-associated athanogene 5
C2ORF49 chromosome 2 open reading frame 49
HDLBP high density lipoprotein binding protein
MRPL44 mitochondrial ribosomal protein L44
MRPS9 mitochondrial ribosomal protein S9
UBC ubiquitin C