LU-99A Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

646 genes with high or low copy number in LU-99A relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
MLXIP MLX interacting protein 4.51153
MGMT O-6-methylguanine-DNA methyltransferase 4.51153
B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 4.51153
FRG2B FSHD region gene 2 family, member B 4.51153
LINC00943 long intergenic non-protein coding RNA 943 4.51153
LINC00944 long intergenic non-protein coding RNA 944 4.51153
DHX37 DEAH (Asp-Glu-Ala-His) box polypeptide 37 4.51153
NPS neuropeptide S 4.51153
CTAGE7P CTAGE family, member 7, pseudogene 4.51153
VENTX VENT homeobox 4.51153
ECHS1 enoyl CoA hydratase, short chain, 1, mitochondrial 4.51153
HRK harakiri, BCL2 interacting protein 4.51153
MIR4297 microRNA 4297 4.51153
MIR202 microRNA 202 4.51153
OR52B4 olfactory receptor, family 52, subfamily B, member 4 (gene/pseudogene) 4.51153
FBXW8 F-box and WD repeat domain containing 8 4.51153
TMEM120B transmembrane protein 120B 4.51153
CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1 4.51153
ZNF511 zinc finger protein 511 4.51153
LINC00601 long intergenic non-protein coding RNA 601 4.51153
C12ORF49 chromosome 12 open reading frame 49 4.51153
CCDC62 coiled-coil domain containing 62 4.51153
DOCK1 dedicator of cytokinesis 1 4.51153
KNTC1 kinetochore associated 1 4.51153
BCL7A B-cell CLL/lymphoma 7A 4.51153
ORAI1 ORAI calcium release-activated calcium modulator 1 4.51153
MORN3 MORN repeat containing 3 4.51153
MKI67 marker of proliferation Ki-67 4.51153
LOC440117 uncharacterized LOC440117 4.51153
PSMD9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 4.51153
SETD1B SET domain containing 1B 4.51153
CLRN3 clarin 3 4.51153
PAOX polyamine oxidase (exo-N4-amino) 4.51153
HCAR1 hydroxycarboxylic acid receptor 1 4.51153
ADGRA1 adhesion G protein-coupled receptor A1 4.51153
HCAR2 hydroxycarboxylic acid receptor 2 4.51153
HCAR3 hydroxycarboxylic acid receptor 3 4.51153
SPRN shadow of prion protein homolog (zebrafish) 4.51153
DIABLO diablo, IAP-binding mitochondrial protein 4.51153
RNFT2 ring finger protein, transmembrane 2 4.51153
EBF3 early B-cell factor 3 4.51153
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2 4.51153
PWWP2B PWWP domain containing 2B 4.51153
SPRNP1 shadow of prion protein homolog (zebrafish) pseudogene 1 4.51153
MTG1 mitochondrial ribosome-associated GTPase 1 4.51153
UBC ubiquitin C 4.51153
DENR density-regulated protein 4.51153
IL31 interleukin 31 4.51153
TMEM132D transmembrane protein 132D 4.51153
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae) 4.51153
INPP5A inositol polyphosphate-5-phosphatase, 40kDa 4.51153
HPD 4-hydroxyphenylpyruvate dioxygenase 4.51153
ADAM8 ADAM metallopeptidase domain 8 4.51153
C10ORF91 chromosome 10 open reading frame 91 4.51153
C10ORF90 chromosome 10 open reading frame 90 4.51153
PRAP1 proline-rich acidic protein 1 4.51153
LOC100128554 uncharacterized LOC100128554 4.51153
NOS1 nitric oxide synthase 1 (neuronal) 4.51153
LRRC43 leucine rich repeat containing 43 4.51153
MIR5188 microRNA 5188 4.51153
LINC00173 long intergenic non-protein coding RNA 173 4.51153
FBXO21 F-box protein 21 4.51153
PTPRE protein tyrosine phosphatase, receptor type, E 4.51153
MIR4472-2 microRNA 4472-2 4.51153
FAM196A family with sequence similarity 196, member A 4.51153
DUX4L3 double homeobox 4 like 3 4.51153
SYCE1 synaptonemal complex central element protein 1 4.51153
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae) 4.51153
MIR3944 microRNA 3944 4.51153
MED13L mediator complex subunit 13-like 4.51153
MAP1LC3B2 microtubule-associated protein 1 light chain 3 beta 2 4.51153
NKX6-2 NK6 homeobox 2 4.51153
TESC tescalcin 4.51153
RSRC2 arginine/serine-rich coiled-coil 2 4.51153
KNDC1 kinase non-catalytic C-lobe domain (KIND) containing 1 4.51153
CLIP1 CAP-GLY domain containing linker protein 1 4.51153
CALY calcyon neuron-specific vesicular protein 4.51153
FOXI2 forkhead box I2 4.51153
PPP2R2D protein phosphatase 2, regulatory subunit B, delta 4.51153
ZCCHC8 zinc finger, CCHC domain containing 8 4.51153
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 4.51153
MIR378C microRNA 378c 4.51153
FUOM fucose mutarotase 4.51153
TUBGCP2 tubulin, gamma complex associated protein 2 4.51153
TCERG1L transcription elongation regulator 1-like 4.51153
HIP1R huntingtin interacting protein 1 related 4.51153
GLRX3 glutaredoxin 3 4.51153
UTF1 undifferentiated embryonic cell transcription factor 1 4.51153
RHOF ras homolog family member F (in filopodia) 4.51153
FGF18 fibroblast growth factor 18 3.12177
POP5 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) 3.12177
CREBRF CREB3 regulatory factor 3.12177
TEX36 testis expressed 36 3.12177
UROS uroporphyrinogen III synthase 3.12177
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 3.12177
SH3PXD2B SH3 and PX domains 2B 3.12177
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C 3.12177
GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) 3.12177
IL2RA interleukin 2 receptor, alpha 3.12177
PRKCQ protein kinase C, theta 3.12177
PXN paxillin 3.12177
TBX3 T-box 3 3.12177
PLA2G1B phospholipase A2, group IB (pancreas) 3.12177
UBTD2 ubiquitin domain containing 2 3.12177
BCCIP BRCA2 and CDKN1A interacting protein 3.12177
LINC00707 long intergenic non-protein coding RNA 707 3.12177
UNC119B unc-119 homolog B (C. elegans) 3.12177
ZMYND11 zinc finger, MYND-type containing 11 3.12177
HSPB8 heat shock 22kDa protein 8 3.12177
GATA3 GATA binding protein 3 3.12177
C12ORF65 chromosome 12 open reading frame 65 3.12177
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa 3.12177
RAB35 RAB35, member RAS oncogene family 3.12177
AACS acetoacetyl-CoA synthetase 3.12177
NEURL1B neuralized E3 ubiquitin protein ligase 1B 3.12177
LINC00710 long intergenic non-protein coding RNA 710 3.12177
CABP1 calcium binding protein 1 3.12177
MIR1178 microRNA 1178 3.12177
PXN-AS1 PXN antisense RNA 1 3.12177
ARL6IP4 ADP-ribosylation factor-like 6 interacting protein 4 3.12177
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7 3.12177
HNF1A HNF1 homeobox A 3.12177
LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) 3.12177
GABRP gamma-aminobutyric acid (GABA) A receptor, pi 3.12177
WDR66 WD repeat domain 66 3.12177
LOC100507091 uncharacterized LOC100507091 3.12177
TUBB8 tubulin, beta 8 class VIII 3.12177
MLEC malectin 3.12177
MIR4498 microRNA 4498 3.12177
RNF10 ring finger protein 10 3.12177
SIRT4 sirtuin 4 3.12177
KCNMB1 potassium channel subfamily M regulatory beta subunit 1 3.12177
CELF2-AS2 CELF2 antisense RNA 2 3.12177
RPL26L1 ribosomal protein L26-like 1 3.12177
ATP6V0E1 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 3.12177
LOC399715 uncharacterized LOC399715 3.12177
LOC100268168 uncharacterized LOC100268168 3.12177
KSR2 kinase suppressor of ras 2 3.12177
RPLP0 ribosomal protein, large, P0 3.12177
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 3.12177
BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1 3.12177
PRKCQ-AS1 PRKCQ antisense RNA 1 3.12177
TRIAP1 TP53 regulated inhibitor of apoptosis 1 3.12177
CCDC64 coiled-coil domain containing 64 3.12177
MIR5699 microRNA 5699 3.12177
RBM17 RNA binding motif protein 17 3.12177
FOXI1 forkhead box I1 3.12177
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit 3.12177
TAOK3 TAO kinase 3 3.12177
SFMBT2 Scm-like with four mbt domains 2 3.12177
KCNIP1 Kv channel interacting protein 1 3.12177
WSB2 WD repeat and SOCS box containing 2 3.12177
C12ORF43 chromosome 12 open reading frame 43 3.12177
NRAV negative regulator of antiviral response (non-protein coding) 3.12177
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2 3.12177
IL15RA interleukin 15 receptor, alpha 3.12177
NKX2-5 NK2 homeobox 5 3.12177
OASL 2'-5'-oligoadenylate synthetase-like 3.12177
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 3.12177
C5ORF58 chromosome 5 open reading frame 58 3.12177
KIN Kin17 DNA and RNA binding protein 3.12177
OGFOD2 2-oxoglutarate and iron-dependent oxygenase domain containing 2 3.12177
PRR26 proline rich 26 3.12177
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 3.12177
ITIH5 inter-alpha-trypsin inhibitor heavy chain family, member 5 3.12177
VSIG10 V-set and immunoglobulin domain containing 10 3.12177
CIT citron rho-interacting serine/threonine kinase 3.12177
SRSF9 serine/arginine-rich splicing factor 9 3.12177
STC2 stanniocalcin 2 3.12177
MIR3155A microRNA 3155a 3.12177
MIR3155B microRNA 3155b 3.12177
MSI1 musashi RNA-binding protein 1 3.12177
LOC283038 uncharacterized LOC283038 3.12177
MMP21 matrix metallopeptidase 21 3.12177
RNF34 ring finger protein 34, E3 ubiquitin protein ligase 3.12177
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain 3.12177
TMEM132B transmembrane protein 132B 3.12177
MIR4700 microRNA 4700 3.12177
GATA3-AS1 GATA3 antisense RNA 1 3.12177
TCTN2 tectonic family member 2 3.12177
SFTA1P surfactant associated 1, pseudogene 3.12177
HNF1A-AS1 HNF1A antisense RNA 1 3.12177
KDM2B lysine (K)-specific demethylase 2B 3.12177
DOCK2 dedicator of cytokinesis 2 3.12177
EFCAB9 EF-hand calcium binding domain 9 3.12177
LINC00200 long intergenic non-protein coding RNA 200 3.12177
MIR4304 microRNA 4304 3.12177
MIR4484 microRNA 4484 3.12177
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 3.12177
MPHOSPH9 M-phase phosphoprotein 9 3.12177
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 3.12177
PEBP1 phosphatidylethanolamine binding protein 1 3.12177
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta 3.12177
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4 3.12177
FLJ37035 uncharacterized LOC399821 3.12177
ANAPC5 anaphase promoting complex subunit 5 3.12177
SNORA74B small nucleolar RNA, H/ACA box 74B 3.12177
SRRM4 serine/arginine repetitive matrix 4 3.12177
CDK2AP1 cyclin-dependent kinase 2 associated protein 1 3.12177
LINC00939 long intergenic non-protein coding RNA 939 3.12177
DYNLL1 dynein, light chain, LC8-type 1 3.12177
RFC5 replication factor C (activator 1) 5, 36.5kDa 3.12177
COQ5 coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 3.12177
MIR3912 microRNA 3912 3.12177
LRRC27 leucine rich repeat containing 27 3.12177
COX6A1 cytochrome c oxidase subunit VIa polypeptide 1 3.12177
ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9 3.12177
LINC00507 long intergenic non-protein coding RNA 507 3.12177
MEIG1 meiosis/spermiogenesis associated 1 2.93899
NUDT5 nudix (nucleoside diphosphate linked moiety X)-type motif 5 2.93899
AKR1C1 aldo-keto reductase family 1, member C1 2.93899
DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2.93899
MIR4480 microRNA 4480 2.93899
GTPBP4 GTP binding protein 4 2.93899
FAM107B family with sequence similarity 107, member B 2.93899
TMED2 transmembrane emp24 domain trafficking protein 2 2.93899
DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 2.93899
PFKP phosphofructokinase, platelet 2.93899
PPIAP30 peptidylprolyl isomerase A (cyclophilin A) pseudogene 30 2.93899
LINC00704 long intergenic non-protein coding RNA 704 2.93899
PROSER2-AS1 PROSER2 antisense RNA 1 2.93899
IDI1 isopentenyl-diphosphate delta isomerase 1 2.93899
RPP38 ribonuclease P/MRP 38kDa subunit 2.93899
UCN3 urocortin 3 2.93899
PROSER2 proline and serine rich 2 2.93899
SETD8 SET domain containing (lysine methyltransferase) 8 2.93899
OPTN optineurin 2.93899
MCM10 minichromosome maintenance complex component 10 2.93899
OLAH oleoyl-ACP hydrolase 2.93899
GDI2 GDP dissociation inhibitor 2 2.93899
FBXO18 F-box protein, helicase, 18 2.93899
PHYH phytanoyl-CoA 2-hydroxylase 2.93899
WDR37 WD repeat domain 37 2.93899
RILPL1 Rab interacting lysosomal protein-like 1 2.93899
CAMK1D calcium/calmodulin-dependent protein kinase ID 2.93899
BRI3BP BRI3 binding protein 2.93899
LINC00934 long intergenic non-protein coding RNA 934 2.93899
EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa 2.93899
FAM208B family with sequence similarity 208, member B 2.93899
AKR1C8P aldo-keto reductase family 1, member C8, pseudogene 2.93899
ADARB2-AS1 ADARB2 antisense RNA 1 2.93899
LARP4B La ribonucleoprotein domain family, member 4B 2.93899
PITRM1 pitrilysin metallopeptidase 1 2.93899
FLJ37505 uncharacterized LOC400087 2.93899
NET1 neuroepithelial cell transforming 1 2.93899
DCLRE1C DNA cross-link repair 1C 2.93899
ANKRD16 ankyrin repeat domain 16 2.93899
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 2.93899
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene 2.93899
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 2.93899
AKR1E2 aldo-keto reductase family 1, member E2 2.93899
FAM171A1 family with sequence similarity 171, member A1 2.93899
RILPL2 Rab interacting lysosomal protein-like 2 2.93899
TMEM233 transmembrane protein 233 2.93899
ECHDC3 enoyl CoA hydratase domain containing 3 2.93899
MIR3908 microRNA 3908 2.93899
SEC61A2 Sec61 alpha 2 subunit (S. cerevisiae) 2.93899
AKR1C4 aldo-keto reductase family 1, member C4 2.93899
TUBAL3 tubulin, alpha-like 3 2.93899
CDNF cerebral dopamine neurotrophic factor 2.93899
DUSP1 dual specificity phosphatase 1 2.93899
IDI2-AS1 IDI2 antisense RNA 1 2.93899
SNRNP35 small nuclear ribonucleoprotein 35kDa (U11/U12) 2.93899
CALML3 calmodulin-like 3 2.93899
UCMA upper zone of growth plate and cartilage matrix associated 2.93899
IDI2 isopentenyl-diphosphate delta isomerase 2 2.93899
KLF6 Kruppel-like factor 6 2.93899
SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila) 2.93899
NMT2 N-myristoyltransferase 2 2.93899
C10ORF111 chromosome 10 open reading frame 111 2.93899
SBNO1 strawberry notch homolog 1 (Drosophila) 2.93899
AKR1C3 aldo-keto reductase family 1, member C3 2.93899
LINC00701 long intergenic non-protein coding RNA 701 2.93899
CCDC60 coiled-coil domain containing 60 2.93899
CCDC3 coiled-coil domain containing 3 2.93899
LOC283070 2.93899
AKR1C2 aldo-keto reductase family 1, member C2 2.93899
LINC00705 long intergenic non-protein coding RNA 705 2.93899
MIR1265 microRNA 1265 2.93899
CALML5 calmodulin-like 5 2.93899
ACBD7 acyl-CoA binding domain containing 7 2.93899
HSPA14 heat shock 70kDa protein 14 2.93899
GTF2H3 general transcription factor IIH, polypeptide 3, 34kDa 2.93899
LINC00700 long intergenic non-protein coding RNA 700 2.93899
CDC123 cell division cycle 123 2.93899
PITRM1-AS1 PITRM1 antisense RNA 1 2.93899
C1QL3 complement component 1, q subcomponent-like 3 2.76305
SEPHS1 selenophosphate synthetase 1 2.76305
ITGA8 integrin, alpha 8 2.76305
PTER phosphotriesterase related 2.76305
BEND7 BEN domain containing 7 2.76305
FAM188A family with sequence similarity 188, member A 2.76305
FRMD4A FERM domain containing 4A 2.76305
RSU1 Ras suppressor protein 1 2.76305
CUBN cubilin (intrinsic factor-cobalamin receptor) 2.76305
PRPF18 pre-mRNA processing factor 18 2.76305
MIR4655 microRNA 4655 2.59653
TMEM184A transmembrane protein 184A 2.59653
PSMG3 proteasome (prosome, macropain) assembly chaperone 3 2.59653
INTS1 integrator complex subunit 1 2.59653
LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 2.59653
AMZ1 archaelysin family metallopeptidase 1 2.59653
ZFAND2A zinc finger, AN1-type domain 2A 2.59653
BRAT1 BRCA1-associated ATM activator 1 2.59653
TTYH3 tweety family member 3 2.59653
TFAMP1 transcription factor A, mitochondrial pseudogene 1 2.59653
UNCX UNC homeobox 2.59653
CHST12 carbohydrate (chondroitin 4) sulfotransferase 12 2.59653
IQCE IQ motif containing E 2.59653
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K 2.59653
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 2.59653
GNA12 guanine nucleotide binding protein (G protein) alpha 12 2.59653
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 2.59653
NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 2.59653
EIF3B eukaryotic translation initiation factor 3, subunit B 2.59653
LOC401296 uncharacterized LOC401296 2.59653
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 2.59653
SNX8 sorting nexin 8 2.59653
MICALL2 MICAL-like 2 2.59653
PSMG3-AS1 PSMG3 antisense RNA 1 (head to head) 2.59653
MIR4648 microRNA 4648 2.59653
C7ORF50 chromosome 7 open reading frame 50 2.49065
DBT dihydrolipoamide branched chain transacylase E2 2.49065
SUN1 Sad1 and UNC84 domain containing 1 2.49065
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1 2.49065
MIR339 microRNA 339 2.49065
GPR146 G protein-coupled receptor 146 2.49065
DNAAF5 dynein, axonemal, assembly factor 5 2.49065
ADAP1 ArfGAP with dual PH domains 1 2.49065
GET4 golgi to ER traffic protein 4 homolog (S. cerevisiae) 2.49065
COX19 COX19 cytochrome c oxidase assembly factor 2.49065
ARC activity-regulated cytoskeleton-associated protein 2.44392
ADGRB1 adhesion G protein-coupled receptor B1 2.44392
ZNF707 zinc finger protein 707 2.41451
MIR4664 microRNA 4664 2.41451
PSCA prostate stem cell antigen 2.41451
JRK Jrk homolog (mouse) 2.41451
RHPN1 rhophilin, Rho GTPase binding protein 1 2.41451
MROH6 maestro heat-like repeat family member 6 2.41451
PYCRL pyrroline-5-carboxylate reductase-like 2.41451
MIR4472-1 microRNA 4472-1 2.41451
LOC100505718 2.41451
TIGD5 tigger transposable element derived 5 2.41451
ZC3H3 zinc finger CCCH-type containing 3 2.41451
LY6K lymphocyte antigen 6 complex, locus K 2.41451
MAFA v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A 2.41451
LY6D lymphocyte antigen 6 complex, locus D 2.41451
LOC100288181 uncharacterized LOC100288181 2.41451
CCDC166 coiled-coil domain containing 166 2.41451
THEM6 thioesterase superfamily member 6 2.41451
RHPN1-AS1 RHPN1 antisense RNA 1 (head to head) 2.41451
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 2.41451
GSDMD gasdermin D 2.41451
FAM83H family with sequence similarity 83, member H 2.41451
LOC286189 2.41451
TSNARE1 t-SNARE domain containing 1 2.41451
BREA2 breast cancer estrogen-induced apoptosis 2 2.41451
LYNX1 Ly6/neurotoxin 1 2.41451
LYPD2 LY6/PLAUR domain containing 2 2.41451
SLURP1 secreted LY6/PLAUR domain containing 1 2.41451
TSTA3 tissue specific transplantation antigen P35B 2.41451
LINC00051 long intergenic non-protein coding RNA 51 2.41451
MAPK15 mitogen-activated protein kinase 15 2.41451
SCRIB scribbled planar cell polarity protein 2.39327
CYP11B1 cytochrome P450, family 11, subfamily B, polypeptide 1 2.39327
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 2.39327
PUF60 poly-U binding splicing factor 60KDa 2.39327
TOP1MT topoisomerase (DNA) I, mitochondrial 2.39327
EPPK1 epiplakin 1 2.39327
ZNF696 zinc finger protein 696 2.39327
ZFP41 ZFP41 zinc finger protein 2.39327
PRDM14 PR domain containing 14 2.39327
C8ORF34 chromosome 8 open reading frame 34 2.39327
GLI4 GLI family zinc finger 4 2.39327
MIR937 microRNA 937 2.39327
ZNF623 zinc finger protein 623 2.39327
NRBP2 nuclear receptor binding protein 2 2.39327
GML glycosylphosphatidylinositol anchored molecule like 2.39327
GPT glutamic-pyruvate transaminase (alanine aminotransferase) 2.36889
RECQL4 RecQ protein-like 4 2.36889
COMMD5 COMM domain containing 5 2.36889
LRRC14 leucine rich repeat containing 14 2.36889
ZNF16 zinc finger protein 16 2.36889
LY6E lymphocyte antigen 6 complex, locus E 2.36889
MIR661 microRNA 661 2.36889
MROH5 maestro heat-like repeat family member 5 2.36889
SULF1 sulfatase 1 2.36889
ZNF252P zinc finger protein 252, pseudogene 2.36889
ARHGAP39 Rho GTPase activating protein 39 2.36889
LRRC24 leucine rich repeat containing 24 2.36889
RPL8 ribosomal protein L8 2.36889
SLCO5A1 solute carrier organic anion transporter family, member 5A1 2.36889
MFSD3 major facilitator superfamily domain containing 3 2.36889
ZNF250 zinc finger protein 250 2.36889
ZNF252P-AS1 ZNF252P antisense RNA 1 2.36889
PTP4A3 protein tyrosine phosphatase type IVA, member 3 2.36889
C8ORF31 chromosome 8 open reading frame 31 2.36889
ZNF7 zinc finger protein 7 2.36889
C8ORF82 chromosome 8 open reading frame 82 2.36889
TMED10P1 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1 2.36889
PPP1R16A protein phosphatase 1, regulatory subunit 16A 2.36889
ZNF517 zinc finger protein 517 2.36889
ZNF34 zinc finger protein 34 2.36889
ZNF251 zinc finger protein 251 2.36889
CDC42P3 cell division cycle 42 pseudogene 3 2.36889
LOC100133669 uncharacterized LOC100133669 2.36889
LY6H lymphocyte antigen 6 complex, locus H 2.35236
PLEC plectin 2.35236
LY96 lymphocyte antigen 96 2.35236
PARP10 poly (ADP-ribose) polymerase family, member 10 2.35236
SLC52A2 solute carrier family 52 (riboflavin transporter), member 2 2.35236
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa 2.35236
FBXL6 F-box and leucine-rich repeat protein 6 2.35236
FOXH1 forkhead box H1 2.35236
ADCK5 aarF domain containing kinase 5 2.35236
KIFC2 kinesin family member C2 2.35236
TMEM70 transmembrane protein 70 2.35236
TMEM249 transmembrane protein 249 2.35236
LOC286190 2.35236
CYHR1 cysteine/histidine-rich 1 2.35236
SLC39A4 solute carrier family 39 (zinc transporter), member 4 2.35236
NCOA2 nuclear receptor coactivator 2 2.35236
TRAM1 translocation associated membrane protein 1 2.35236
MIR1234 microRNA 1234 2.35236
TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 2.35236
XKR9 XK, Kell blood group complex subunit-related family, member 9 2.35236
LACTB2 lactamase, beta 2 2.35236
VPS28 vacuolar protein sorting 28 homolog (S. cerevisiae) 2.35236
SCRT1 scratch family zinc finger 1 2.35236
GPR20 G protein-coupled receptor 20 2.35236
TONSL tonsoku-like, DNA repair protein 2.35236
UBE2W ubiquitin-conjugating enzyme E2W (putative) 2.35236
MIR939 microRNA 939 2.35236
CPNE3 copine III 2.3178
STAU2-AS1 STAU2 antisense RNA 1 2.3178
TRPA1 transient receptor potential cation channel, subfamily A, member 1 2.3178
EYA1 EYA transcriptional coactivator and phosphatase 1 2.3178
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 2.3178
STAU2 staufen double-stranded RNA binding protein 2 2.3178
RDH10 retinol dehydrogenase 10 (all-trans) 2.3178
RPL7 ribosomal protein L7 2.3178
SBSPON somatomedin B and thrombospondin, type 1 domain containing 2.3178
LOC392232 transient receptor potential cation channel, subfamily A, member 1 pseudogene 2.3178
MSC musculin 2.3178
PI15 peptidase inhibitor 15 2.3178
HNF4G hepatocyte nuclear factor 4, gamma 2.30944
ZFHX4 zinc finger homeobox 4 2.30944
PEX2 peroxisomal biogenesis factor 2 2.30944
LOC100130301 2.30944
ZFHX4-AS1 ZFHX4 antisense RNA 1 2.30944
MIR2052 microRNA 2052 2.30944
WWP1 WW domain containing E3 ubiquitin protein ligase 1 2.30944
SLC7A13 solute carrier family 7 (anionic amino acid transporter), member 13 2.30944
SLC45A4 solute carrier family 45, member 4 2.30944
CNGB3 cyclic nucleotide gated channel beta 3 2.30944
FLJ39080 2.30944
MIR5681A microRNA 5681a 2.30944
MIR5681B microRNA 5681b 2.30944
ATP6V0D2 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2 2.30944
RMDN1 regulator of microtubule dynamics 1 2.30944
JPH1 junctophilin 1 2.30944
GDAP1 ganglioside induced differentiation associated protein 1 2.30944
KCNB2 potassium channel, voltage gated Shab related subfamily B, member 2 2.30944
PSKH2 protein serine kinase H2 2.30944
REXO1L2P REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 2, pseudogene 2.30944
ZFAND1 zinc finger, AN1-type domain 1 2.25904
CNBD1 cyclic nucleotide binding domain containing 1 2.25904
LOC101241902 chromosome 4 open reading frame 46 pseudogene 2.25904
IL7 interleukin 7 2.25904
PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha 2.25904
CHRAC1 chromatin accessibility complex 1 2.25904
SNX16 sorting nexin 16 2.25904
CHMP4C charged multivesicular body protein 4C 2.25904
DENND3 DENN/MADD domain containing 3 2.25904
SLC10A5 solute carrier family 10, member 5 2.25904
ZC2HC1A zinc finger, C2HC-type containing 1A 2.25904
IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 2.25904
AGO2 argonaute RISC catalytic component 2 2.24845
STMN2 stathmin 2 2.24845
FABP4 fatty acid binding protein 4, adipocyte 2.24845
PMP2 peripheral myelin protein 2 2.24845
FABP9 fatty acid binding protein 9, testis 2.24845
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 2.24845
FABP5 fatty acid binding protein 5 (psoriasis-associated) 2.24845
FABP12 fatty acid binding protein 12 2.24845
MRPS28 mitochondrial ribosomal protein S28 2.24845
ZBTB10 zinc finger and BTB domain containing 10 2.24139
MIR5708 microRNA 5708 2.24139
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 2.24139
TPD52 tumor protein D52 2.24139
KCNK9 potassium channel, two pore domain subfamily K, member 9 2.24139
TRAPPC9 trafficking protein particle complex 9 2.2355
PTK2 protein tyrosine kinase 2 2.23324
ZNF704 zinc finger protein 704 2.23324
COL22A1 collagen, type XXII, alpha 1 2.22917
FAM135B family with sequence similarity 135, member B 2.22633
NCOR2 nuclear receptor corepressor 2 2.15402
CCDC92 coiled-coil domain containing 92 2.15316
DPYSL4 dihydropyrimidinase-like 4 2.15316
ZNF664-FAM101A filamin-interacting protein FAM101A 2.15316
TMEM132C transmembrane protein 132C 2.15316
DNAH10 dynein, axonemal, heavy chain 10 2.15316
MIR620 microRNA 620 2.15316
GLT1D1 glycosyltransferase 1 domain containing 1 2.15316
JAKMIP3 Janus kinase and microtubule interacting protein 3 2.15316
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4 2.15316
SCARB1 scavenger receptor class B, member 1 2.15316
ZNF664 zinc finger protein 664 2.15316
MIR3612 microRNA 3612 2.15316
FAM101A family with sequence similarity 101, member A 2.15316
STK10 serine/threonine kinase 10 2.14116
SPPL3 signal peptide peptidase like 3 2.14116
STK32C serine/threonine kinase 32C 2.14116
FANK1-AS1 FANK1 antisense RNA 1 2.14116
ADAM12 ADAM metallopeptidase domain 12 2.14116
TLX3 T-cell leukemia homeobox 3 2.14116
FANK1 fibronectin type III and ankyrin repeat domains 1 2.14116
RANBP17 RAN binding protein 17 2.14116
FBXW11 F-box and WD repeat domain containing 11 2.14116
DHX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 2.14116
USP6NL USP6 N-terminal like 2.12703
ASB13 ankyrin repeat and SOCS box containing 13 2.12703
CELF2 CUGBP, Elav-like family member 2 2.12703
CARD11 caspase recruitment domain family, member 11 2.10038
LOC442497 uncharacterized LOC442497 2.09431
FAM20C family with sequence similarity 20, member C 2.09431
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta 2.09431
FLJ44511 uncharacterized LOC441307 2.09431
PDGFA platelet-derived growth factor alpha polypeptide 2.09431
DUX4 double homeobox 4 2.09117
RBAK-RBAKDN RBAK-RBAKDN readthrough 2.09073
RNF216P1 ring finger protein 216 pseudogene 1 2.09073
MMD2 monocyte to macrophage differentiation-associated 2 2.09073
AP5Z1 adaptor-related protein complex 5, zeta 1 subunit 2.09073
PAPOLB poly(A) polymerase beta (testis specific) 2.09073
FOXK1 forkhead box K1 2.09073
RADIL Ras association and DIL domains 2.09073
MIR4656 microRNA 4656 2.09073
SDK1 sidekick cell adhesion molecule 1 2.08334
C8ORF33 chromosome 8 open reading frame 33 2.08021
CYP11B2 cytochrome P450, family 11, subfamily B, polypeptide 2 2.08021
SNORA9 small nucleolar RNA, H/ACA box 9 2.07851
GRINA glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) 2.07776
OPLAH 5-oxoprolinase (ATP-hydrolysing) 2.07776
SPATC1 spermatogenesis and centriole associated 1 2.07776
DGAT1 diacylglycerol O-acyltransferase 1 2.07776
KIAA1875 KIAA1875 2.07776
MAF1 MAF1 homolog (S. cerevisiae) 2.07776
HSF1 heat shock transcription factor 1 2.07776
BOP1 block of proliferation 1 2.07776
SHARPIN SHANK-associated RH domain interactor 2.07776
EXOSC4 exosome component 4 2.07776
GPAA1 glycosylphosphatidylinositol anchor attachment 1 2.07776
CYC1 cytochrome c-1 2.07776
MROH1 maestro heat-like repeat family member 1 2.07776
CA2 carbonic anhydrase II 2.0731
LOC100132891 2.0731
E2F5 E2F transcription factor 5, p130-binding 2.0731
C8ORF59 chromosome 8 open reading frame 59 2.0731
CA3 carbonic anhydrase III 2.0731
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 2.0731
IAPP islet amyloid polypeptide 2.07018
GOLT1B golgi transport 1B 2.06989
PYROXD1 pyridine nucleotide-disulphide oxidoreductase domain 1 2.06989
LRRCC1 leucine rich repeat and coiled-coil centrosomal protein 1 2.06989
RECQL RecQ helicase-like 2.06989
CA1 carbonic anhydrase I 2.06989
CA13 carbonic anhydrase XIII 2.06989
SLCO1A2 solute carrier organic anion transporter family, member 1A2 2.06707
LDHB lactate dehydrogenase B 2.06626
AMN1 antagonist of mitotic exit network 1 homolog (S. cerevisiae) 2.06626
GYS2 glycogen synthase 2 (liver) 2.06626
DENND5B-AS1 DENND5B antisense RNA 1 2.06626
METTL20 methyltransferase like 20 2.06626
TSPAN11 tetraspanin 11 2.06473
DENND5B DENN/MADD domain containing 5B 2.06473
DDX11-AS1 DDX11 antisense RNA 1 2.06473
RALYL RALY RNA binding protein-like 2.06473
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 2.06473
TMTC1 transmembrane and tetratricopeptide repeat containing 1 2.06316
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8 2.06316
FAM60A family with sequence similarity 60, member A 2.06316
FLJ13224 uncharacterized LOC79857 2.06316
LINC00941 long intergenic non-protein coding RNA 941 2.06316
OVOS2 ovostatin 2 2.06316
SNORA75 small nucleolar RNA, H/ACA box 75 2.06233
ERGIC2 ERGIC and golgi 2 2.0622
IPO8 importin 8 2.0622
FAR2 fatty acyl CoA reductase 2 2.0622
OVCH1-AS1 OVCH1 antisense RNA 1 2.0622
CAPRIN2 caprin family member 2 2.0622
OVCH1 ovochymase 1 2.0622
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 2.0615
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase 2.06105
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 2.06105
MRPS35 mitochondrial ribosomal protein S35 2.06061
CCDC91 coiled-coil domain containing 91 2.06061
KLHL42 kelch-like family member 42 2.06061
REP15 RAB15 effector protein 2.06061
MANSC4 MANSC domain containing 4 2.06061
ETNK1 ethanolamine kinase 1 2.05973
PTHLH parathyroid hormone-like hormone 2.05965
C2CD5 C2 calcium-dependent domain containing 5 2.05965
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 2.05965
SMCO2 single-pass membrane protein with coiled-coil domains 2 2.05942
FGFR1OP2 FGFR1 oncogene partner 2 2.05864
MED21 mediator complex subunit 21 2.05864
C12ORF71 chromosome 12 open reading frame 71 2.05864
ARNTL2 aryl hydrocarbon receptor nuclear translocator-like 2 2.05864
TM7SF3 transmembrane 7 superfamily member 3 2.05864
BHLHE41 basic helix-loop-helix family, member e41 2.05778
ASUN asunder spermatogenesis regulator 2.05778
STK38L serine/threonine kinase 38 like 2.05778
MIR920 microRNA 920 2.05673
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 2.05661
RASSF8-AS1 RASSF8 atnisense RNA 1 2.05661
MIR4302 microRNA 4302 2.05635
SSPN sarcospan 2.05635
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 2.0557
LINC00477 long intergenic non-protein coding RNA 477 2.05441
SOX5 SRY (sex determining region Y)-box 5 2.05408
BCAT1 branched chain amino-acid transaminase 1, cytosolic 2.05311
C12ORF77 chromosome 12 open reading frame 77 2.05311
LRMP lymphoid-restricted membrane protein 2.05242
LYRM5 LYR motif containing 5 2.0521
CASC1 cancer susceptibility candidate 1 2.0521
KRAS Kirsten rat sarcoma viral oncogene homolog 2.05093

low copy number

Symbol Name Standardized Value
ACTRT1 actin-related protein T1 -3.53061
HMGN5 high mobility group nucleosome binding domain 5 -3.53061
LINC00266-1 long intergenic non-protein coding RNA 266-1 -3.08391
GSTTP1 glutathione S-transferase theta pseudogene 1 -2.86117
HLA-H major histocompatibility complex, class I, H (pseudogene) -2.8504
HLA-J major histocompatibility complex, class I, J (pseudogene) -2.8473
MACROD2 MACRO domain containing 2 -2.81481
MACROD2-AS1 MACROD2 antisense RNA 1 -2.81384
LOC100506422 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -2.79871
TUSC1 tumor suppressor candidate 1 -2.78941
LOC391322 D-dopachrome tautomerase-like -2.78432
GSTT1 glutathione S-transferase theta 1 -2.78432
GSTTP2 glutathione S-transferase theta pseudogene 2 -2.78432
IZUMO3 IZUMO family member 3 -2.77409
HCG4B HLA complex group 4B (non-protein coding) -2.75184
ELAVL2 ELAV like neuron-specific RNA binding protein 2 -2.74526
IFNA8 interferon, alpha 8 -2.73024
IFNA1 interferon, alpha 1 -2.72828
IFNE interferon, epsilon -2.72466