KATO III Gene Set

Dataset Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles
Category genomics
Type cell line
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Genes

213 genes mutated in the KATO III cell line from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.

Symbol Name
ABCD4 ATP-binding cassette, sub-family D (ALD), member 4
ACP1 acid phosphatase 1, soluble
ADA adenosine deaminase
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
AMIGO2 adhesion molecule with Ig-like domain 2
ANKEF1 ankyrin repeat and EF-hand domain containing 1
ANKHD1 ankyrin repeat and KH domain containing 1
ANKHD1-EIF4EBP3 ANKHD1-EIF4EBP3 readthrough
ANKRD16 ankyrin repeat domain 16
ARHGAP44 Rho GTPase activating protein 44
ARHGEF1 Rho guanine nucleotide exchange factor (GEF) 1
ATG2B autophagy related 2B
ATM ATM serine/threonine kinase
ATR ATR serine/threonine kinase
ATXN3 ataxin 3
B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
BAG6 BCL2-associated athanogene 6
BAZ2A bromodomain adjacent to zinc finger domain, 2A
BLM Bloom syndrome, RecQ helicase-like
BRI3BP BRI3 binding protein
BTNL9 butyrophilin-like 9
C6ORF47 chromosome 6 open reading frame 47
CALCOCO2 calcium binding and coiled-coil domain 2
CCDC154 coiled-coil domain containing 154
CCNL2 cyclin L2
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like)
CDC42BPB CDC42 binding protein kinase beta (DMPK-like)
CDC42EP1 CDC42 effector protein (Rho GTPase binding) 1
CDCA2 cell division cycle associated 2
CDCA3 cell division cycle associated 3
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CEACAM7 carcinoembryonic antigen-related cell adhesion molecule 7
CEP250 centrosomal protein 250kDa
CLASP1 cytoplasmic linker associated protein 1
CLDN3 claudin 3
CNTRL centriolin
COL27A1 collagen, type XXVII, alpha 1
CSAD cysteine sulfinic acid decarboxylase
CSPP1 centrosome and spindle pole associated protein 1
CTBP1 C-terminal binding protein 1
CYSTM1 cysteine-rich transmembrane module containing 1
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1
DECR2 2,4-dienoyl CoA reductase 2, peroxisomal
DENND4B DENN/MADD domain containing 4B
DIS3L DIS3 like exosome 3'-5' exoribonuclease
DNMBP dynamin binding protein
DOT1L DOT1-like histone H3K79 methyltransferase
DPP7 dipeptidyl-peptidase 7
DTX3L deltex 3 like, E3 ubiquitin ligase
EHBP1L1 EH domain binding protein 1-like 1
ELF2 E74-like factor 2 (ets domain transcription factor)
EMC10 ER membrane protein complex subunit 10
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)
EP400 E1A binding protein p400
ESAM endothelial cell adhesion molecule
ETNK1 ethanolamine kinase 1
FAM188B family with sequence similarity 188, member B
FAM89B family with sequence similarity 89, member B
FANCF Fanconi anemia, complementation group F
FBXO33 F-box protein 33
FHOD1 formin homology 2 domain containing 1
GABRR1 gamma-aminobutyric acid (GABA) A receptor, rho 1
GATA6 GATA binding protein 6
GFER growth factor, augmenter of liver regeneration
GIGYF2 GRB10 interacting GYF protein 2
GNPAT glyceronephosphate O-acyltransferase
GOLGA3 golgin A3
GPD1L glycerol-3-phosphate dehydrogenase 1-like
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein
GSDMD gasdermin D
GSG2 germ cell associated 2 (haspin)
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HLA-DRB4 major histocompatibility complex, class II, DR beta 4
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B
HPS1 Hermansky-Pudlak syndrome 1
HSPBP1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
ICAM1 intercellular adhesion molecule 1
IFNAR1 interferon (alpha, beta and omega) receptor 1
IGF2R insulin-like growth factor 2 receptor
INCENP inner centromere protein antigens 135/155kDa
INSIG1 insulin induced gene 1
INTS1 integrator complex subunit 1
IRF5 interferon regulatory factor 5
ITPA inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
JMJD1C jumonji domain containing 1C
KANK2 KN motif and ankyrin repeat domains 2
KCTD5 potassium channel tetramerization domain containing 5
KIAA0355 KIAA0355
KIAA1551 KIAA1551
KIAA2026 KIAA2026
KIF18A kinesin family member 18A
KIF4B kinesin family member 4B
KLK11 kallikrein-related peptidase 11
KMT2A lysine (K)-specific methyltransferase 2A
KMT2B lysine (K)-specific methyltransferase 2B
KRT75 keratin 75, type II
KRT78 keratin 78, type II
LBR lamin B receptor
LCA5 Leber congenital amaurosis 5
LPCAT2 lysophosphatidylcholine acyltransferase 2
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
LRWD1 leucine-rich repeats and WD repeat domain containing 1
MAGEC1 melanoma antigen family C1
MAP4 microtubule-associated protein 4
MCM5 minichromosome maintenance complex component 5
MEGF6 multiple EGF-like-domains 6
MOCOS molybdenum cofactor sulfurase
MON2 MON2 homolog (S. cerevisiae)
MRPL11 mitochondrial ribosomal protein L11
MSANTD3 Myb/SANT-like DNA-binding domain containing 3
MSANTD3-TMEFF1 MSANTD3-TMEFF1 readthrough
MSH3 mutS homolog 3
MTUS1 microtubule associated tumor suppressor 1
MUC17 mucin 17, cell surface associated
MX1 MX dynamin-like GTPase 1
MYH9 myosin, heavy chain 9, non-muscle
MYO18A myosin XVIIIA
NABP2 nucleic acid binding protein 2
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NDUFAF3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
NFIX nuclear factor I/X (CCAAT-binding transcription factor)
NPR2 natriuretic peptide receptor 2
OSBPL10 oxysterol binding protein-like 10
PADI1 peptidyl arginine deiminase, type I
PCIF1 PDX1 C-terminal inhibiting factor 1
PCNXL3 pecanex-like 3 (Drosophila)
PCYOX1L prenylcysteine oxidase 1 like
PDCD6IP programmed cell death 6 interacting protein
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1
PDZD7 PDZ domain containing 7
PDZD8 PDZ domain containing 8
PELP1 proline, glutamate and leucine rich protein 1
PES1 pescadillo ribosomal biogenesis factor 1
PGRMC2 progesterone receptor membrane component 2
POLD1 polymerase (DNA directed), delta 1, catalytic subunit
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
PRDM15 PR domain containing 15
PRSS41 protease, serine, 41
PSCA prostate stem cell antigen
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2
PSMD9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
PUS7 pseudouridylate synthase 7 (putative)
RAB11FIP5 RAB11 family interacting protein 5 (class I)
RAD23A RAD23 homolog A (S. cerevisiae)
RAET1G retinoic acid early transcript 1G
RBM47 RNA binding motif protein 47
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit
RFC3 replication factor C (activator 1) 3, 38kDa
RFX1 regulatory factor X, 1 (influences HLA class II expression)
RILP Rab interacting lysosomal protein
RPAP1 RNA polymerase II associated protein 1
RTCB RNA 2',3'-cyclic phosphate and 5'-OH ligase
RTKN2 rhotekin 2
SART1 squamous cell carcinoma antigen recognized by T cells
SCML1 sex comb on midleg-like 1 (Drosophila)
SCPEP1 serine carboxypeptidase 1
SEC24A SEC24 family member A
SHROOM3 shroom family member 3
SLC30A9 solute carrier family 30 (zinc transporter), member 9
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6
SMIM12 small integral membrane protein 12
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1
SPIRE2 spire-type actin nucleation factor 2
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SYNE2 spectrin repeat containing, nuclear envelope 2
SYNJ1 synaptojanin 1
SYT8 synaptotagmin VIII
SYVN1 synovial apoptosis inhibitor 1, synoviolin
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2
TAF1L TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like
TBC1D16 TBC1 domain family, member 16
TBC1D8 TBC1 domain family, member 8 (with GRAM domain)
TBC1D9 TBC1 domain family, member 9 (with GRAM domain)
TBCD tubulin folding cofactor D
TEP1 telomerase-associated protein 1
TMC6 transmembrane channel-like 6
TMEM132A transmembrane protein 132A
TMEM168 transmembrane protein 168
TMEM43 transmembrane protein 43
TNK2 tyrosine kinase, non-receptor, 2
TRMT5 tRNA methyltransferase 5
TSPAN15 tetraspanin 15
TTLL11 tubulin tyrosine ligase-like family member 11
UBR2 ubiquitin protein ligase E3 component n-recognin 2
UNKL unkempt family zinc finger-like
URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
USP36 ubiquitin specific peptidase 36
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
UTRN utrophin
VILL villin-like
VPS13B vacuolar protein sorting 13 homolog B (yeast)
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae)
WDR36 WD repeat domain 36
WDR81 WD repeat domain 81
XAF1 XIAP associated factor 1
ZADH2 zinc binding alcohol dehydrogenase domain containing 2
ZBED4 zinc finger, BED-type containing 4
ZBED6 zinc finger, BED-type containing 6
ZBTB43 zinc finger and BTB domain containing 43
ZC2HC1A zinc finger, C2HC-type containing 1A
ZC3H18 zinc finger CCCH-type containing 18
ZC3H4 zinc finger CCCH-type containing 4
ZFAT zinc finger and AT hook domain containing
ZMIZ2 zinc finger, MIZ-type containing 2
ZNF219 zinc finger protein 219
ZNF362 zinc finger protein 362
ZNF445 zinc finger protein 445
ZNF548 zinc finger protein 548
ZNF557 zinc finger protein 557
ZNF584 zinc finger protein 584