Hippocampal atrophy Gene Set

Dataset GWAS Catalog SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description Atrophy of the hippocampus as a result of some external stress or disease (Experimental Factor Ontology, EFO_0005039)
External Link https://www.ebi.ac.uk/gwas/search?query=Hippocampal atrophy
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Genes

17 genes associated with the Hippocampal atrophy phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
F5 coagulation factor V (proaccelerin, labile factor) 0.522843
LHFP lipoma HMGIC fusion partner 0.405958
GCFC2 GC-rich sequence DNA-binding factor 2 0.369252
EFNA5 ephrin-A5 0.314454
PRUNE2 prune homolog 2 (Drosophila) 0.246511
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.220915
LOC101927502 uncharacterized LOC101927502 0.220915
SLC1A7 solute carrier family 1 (glutamate transporter), member 7 0.220915
LOC101927598 uncharacterized LOC101927598 0.220915
ZBP1 Z-DNA binding protein 1 0.165905
MROH8 maestro heat-like repeat family member 8 0.165905
TTC27 tetratricopeptide repeat domain 27 0.165905
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.129504
ARSB arylsulfatase B 0.057619
CHD6 chromodomain helicase DNA binding protein 6 0.048624
LOC285696 uncharacterized LOC285696 0.048624
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.042592