Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A71B-01A-12R-A34R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

308 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A71B-01A-12R-A34R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group)
ACTRT1 actin-related protein T1
ADRBK1 adrenergic, beta, receptor kinase 1
ADSS adenylosuccinate synthase
AFF2 AF4/FMR2 family, member 2
AFP alpha-fetoprotein
AKR1C2 aldo-keto reductase family 1, member C2
AKR1C8P aldo-keto reductase family 1, member C8, pseudogene
ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit
AMZ2 archaelysin family metallopeptidase 2
AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1
ANO3 anoctamin 3
ARF1 ADP-ribosylation factor 1
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16
ARV1 ARV1 homolog (S. cerevisiae)
ASIC5 acid sensing (proton gated) ion channel family member 5
B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2
BANF1 barrier to autointegration factor 1
BCAP31 B-cell receptor-associated protein 31
BCL2L13 BCL2-like 13 (apoptosis facilitator)
BCR breakpoint cluster region
BID BH3 interacting domain death agonist
BRCC3 BRCA1/BRCA2-containing complex, subunit 3
C11ORF80 chromosome 11 open reading frame 80
C11ORF87 chromosome 11 open reading frame 87
C15ORF54 chromosome 15 open reading frame 54
C18ORF8 chromosome 18 open reading frame 8
C1ORF131 chromosome 1 open reading frame 131
C1ORF35 chromosome 1 open reading frame 35
C1ORF64 chromosome 1 open reading frame 64
C20ORF144 chromosome 20 open reading frame 144
C4ORF17 chromosome 4 open reading frame 17
C4ORF51 chromosome 4 open reading frame 51
CABYR calcium binding tyrosine-(Y)-phosphorylation regulated
CAGE1 cancer antigen 1
CAPN2 calpain 2, (m/II) large subunit
CCDC185 coiled-coil domain containing 185
CCDC87 coiled-coil domain containing 87
CD101 CD101 molecule
CDC45 cell division cycle 45
CDC73 cell division cycle 73
CECR5 cat eye syndrome chromosome region, candidate 5
CLCC1 chloride channel CLIC-like 1
CLEC12A C-type lectin domain family 12, member A
CLEC12B C-type lectin domain family 12, member B
CNIH4 cornichon family AMPA receptor auxiliary protein 4
COA4 cytochrome c oxidase assembly factor 4 homolog (S. cerevisiae)
COA6 cytochrome c oxidase assembly factor 6
COG2 component of oligomeric golgi complex 2
COPS7A COP9 signalosome subunit 7A
COPS7B COP9 signalosome subunit 7B
CORO1B coronin, actin binding protein, 1B
CPLX4 complexin 4
CRYBA1 crystallin, beta A1
CRYGB crystallin, gamma B
CRYGC crystallin, gamma C
CSAG1 chondrosarcoma associated gene 1
CSAG3 CSAG family, member 3
CTRL chymotrypsin-like
CXORF40A chromosome X open reading frame 40A
CXORF40B chromosome X open reading frame 40B
CXORF57 chromosome X open reading frame 57
CYP4F30P cytochrome P450, family 4, subfamily F, polypeptide 30, pseudogene
DESI2 desumoylating isopeptidase 2
DGCR8 DGCR8 microprocessor complex subunit
DHX34 DEAH (Asp-Glu-Ala-His) box polypeptide 34
DISP1 dispatched homolog 1 (Drosophila)
DKC1 dyskeratosis congenita 1, dyskerin
DNM1P46 dynamin 1 pseudogene 46
DOCK11 dedicator of cytokinesis 11
DPP3 dipeptidyl-peptidase 3
DSCC1 DNA replication and sister chromatid cohesion 1
EIF3D eukaryotic translation initiation factor 3, subunit D
EMD emerin
EN1 engrailed homeobox 1
ENAH enabled homolog (Drosophila)
ENOX2 ecto-NOX disulfide-thiol exchanger 2
EPRS glutamyl-prolyl-tRNA synthetase
EXO1 exonuclease 1
F13B coagulation factor XIII, B polypeptide
FAM122B family with sequence similarity 122B
FAM223B family with sequence similarity 223, member B (non-protein coding)
FAM47A family with sequence similarity 47, member A
FAM58A family with sequence similarity 58, member A
FAM71C family with sequence similarity 71, member C
FARSB phenylalanyl-tRNA synthetase, beta subunit
FBXO28 F-box protein 28
FBXW10 F-box and WD repeat domain containing 10
FGF21 fibroblast growth factor 21
FH fumarate hydratase
FLJ33360 FLJ33360 protein
FOPNL FGFR1OP N-terminal like
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GABRG1 gamma-aminobutyric acid (GABA) A receptor, gamma 1
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11
GDI1 GDP dissociation inhibitor 1
GGPS1 geranylgeranyl diphosphate synthase 1
GLRA1 glycine receptor, alpha 1
GNPAT glyceronephosphate O-acyltransferase
GNPDA2 glucosamine-6-phosphate deaminase 2
GPC5 glypican 5
GRAMD4 GRAM domain containing 4
GSTM1 glutathione S-transferase mu 1
GSTM2 glutathione S-transferase mu 2 (muscle)
GSTM2P1 glutathione S-transferase mu 2 (muscle) pseudogene 1
GTDC1 glycosyltransferase-like domain containing 1
GUSBP1 glucuronidase, beta pseudogene 1
HDAC10 histone deacetylase 10
HIRA histone cell cycle regulator
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
HOXA9 homeobox A9
HPRT1 hypoxanthine phosphoribosyltransferase 1
HRASLS HRAS-like suppressor
HSPE1 heat shock 10kDa protein 1
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IMPACT impact RWD domain protein
ING5 inhibitor of growth family, member 5
INTS7 integrator complex subunit 7
IRAK1 interleukin-1 receptor-associated kinase 1
JOSD1 Josephin domain containing 1
KAT5 K(lysine) acetyltransferase 5
KCNIP4-IT1 KCNIP4 intronic transcript 1
KCNK1 potassium channel, two pore domain subfamily K, member 1
KLHL12 kelch-like family member 12
KRTAP20-2 keratin associated protein 20-2
KRTAP27-1 keratin associated protein 27-1
L3MBTL2 l(3)mbt-like 2 (Drosophila)
LAMP2 lysosomal-associated membrane protein 2
LGTN ligatin
LIAS lipoic acid synthetase
LIME1 Lck interacting transmembrane adaptor 1
LINC00173 long intergenic non-protein coding RNA 173
LINC00264 long intergenic non-protein coding RNA 264
LOC100271832 uncharacterized LOC100271832
LOC200726 hCG1657980
LOC256880 uncharacterized LOC256880
LOC285692 uncharacterized LOC285692
LOC401127 WD repeat domain 5 pseudogene
LOC494141 solute carrier family 25, member 51 pseudogene
LOC728024 chromosome X open reading frame 56 pseudogene
LOC729609 uncharacterized LOC729609
LRP5 low density lipoprotein receptor-related protein 5
MAGEA1 melanoma antigen family A1
MAGEA11 melanoma antigen family A11
MAGEA12 melanoma antigen family A12
MAGEA2 melanoma antigen family A2
MAGEA3 melanoma antigen family A3
MAGEA4 melanoma antigen family A4
MAGEA6 melanoma antigen family A6
MAGOHB mago-nashi homolog B (Drosophila)
MAP10 microtubule-associated protein 10
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MARK1 MAP/microtubule affinity-regulating kinase 1
MC4R melanocortin 4 receptor
MED30 mediator complex subunit 30
METAP1D methionyl aminopeptidase type 1D (mitochondrial)
MIR600HG MIR600 host gene
MKNK1 MAP kinase interacting serine/threonine kinase 1
MMP26 matrix metallopeptidase 26
MROH7 maestro heat-like repeat family member 7
MRPL48 mitochondrial ribosomal protein L48
MSL3P1 male-specific lethal 3 homolog (Drosophila) pseudogene 1
MTCP1 mature T-cell proliferation 1
MTMR1 myotubularin related protein 1
MUM1 melanoma associated antigen (mutated) 1
MUS81 MUS81 structure-specific endonuclease subunit
NAIF1 nuclear apoptosis inducing factor 1
NCAPH2 non-SMC condensin II complex, subunit H2
NEFL neurofilament, light polypeptide
NEFM neurofilament, medium polypeptide
NEUROG1 neurogenin 1
NF2 neurofibromin 2 (merlin)
NKRF NFKB repressing factor
NKX1-2 NK1 homeobox 2
NOL12 nucleolar protein 12
NPC1 Niemann-Pick disease, type C1
NRXN1 neurexin 1
NTPCR nucleoside-triphosphatase, cancer-related
NUP133 nucleoporin 133kDa
NVL nuclear VCP-like
OR10G2 olfactory receptor, family 10, subfamily G, member 2
OR12D2 olfactory receptor, family 12, subfamily D, member 2 (gene/pseudogene)
OR13H1 olfactory receptor, family 13, subfamily H, member 1
OR14I1 olfactory receptor, family 14, subfamily I, member 1
OR14J1 olfactory receptor, family 14, subfamily J, member 1
OR2A2 olfactory receptor, family 2, subfamily A, member 2
OR2A25 olfactory receptor, family 2, subfamily A, member 25
OR2A5 olfactory receptor, family 2, subfamily A, member 5
OR51I2 olfactory receptor, family 51, subfamily I, member 2
OR5D18 olfactory receptor, family 5, subfamily D, member 18
OR5T3 olfactory receptor, family 5, subfamily T, member 3
OR7E156P olfactory receptor, family 7, subfamily E, member 156 pseudogene
OSBPL1A oxysterol binding protein-like 1A
P2RX6P purinergic receptor P2X, ligand gated ion channel, 6 pseudogene
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PARP1 poly (ADP-ribose) polymerase 1
PC pyruvate carboxylase
PDE6H phosphodiesterase 6H, cGMP-specific, cone, gamma
PDZD9 PDZ domain containing 9
PER4 period circadian clock 3 pseudogene
PGAM5 phosphoglycerate mutase family member 5
PID1 phosphotyrosine interaction domain containing 1
PITPNB phosphatidylinositol transfer protein, beta
PKD1L2 polycystic kidney disease 1-like 2 (gene/pseudogene)
PLSCR2 phospholipid scramblase 2
POLDIP3 polymerase (DNA-directed), delta interacting protein 3
POLR3H polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PPID peptidylprolyl isomerase D
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme
PPP6R3 protein phosphatase 6, regulatory subunit 3
PRDX1 peroxiredoxin 1
PRPS1 phosphoribosyl pyrophosphate synthetase 1
PRSS42 protease, serine, 42
PSAT1 phosphoserine aminotransferase 1
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
PYCR2 pyrroline-5-carboxylate reductase family, member 2
QRFPR pyroglutamylated RFamide peptide receptor
RAB1B RAB1B, member RAS oncogene family
RAB4A RAB4A, member RAS oncogene family
RBBP8 retinoblastoma binding protein 8
RBM34 RNA binding motif protein 34
RCC1 regulator of chromosome condensation 1
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RFC1 replication factor C (activator 1) 1, 145kDa
RFXAP regulatory factor X-associated protein
RIOK3 RIO kinase 3
RNF217-AS1 RNF217 antisense RNA 1 (head to head)
RPL13P5 ribosomal protein L13 pseudogene 5
RPL36A ribosomal protein L36a
RPS10P7 ribosomal protein S10 pseudogene 7
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae)
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
SART1 squamous cell carcinoma antigen recognized by T cells
SCYL1 SCY1-like 1 (S. cerevisiae)
SDCCAG8 serologically defined colon cancer antigen 8
SF3B2 splicing factor 3b, subunit 2, 145kDa
SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene)
SLC10A3 solute carrier family 10, member 3
SLC35F3 solute carrier family 35, member F3
SLC45A4 solute carrier family 45, member 4
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMCO2 single-pass membrane protein with coiled-coil domains 2
SMO smoothened, frizzled class receptor
SNAP47 synaptosomal-associated protein, 47kDa
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNORA36B small nucleolar RNA, H/ACA box 36B
SNORA40 small nucleolar RNA, H/ACA box 40
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA45B small nucleolar RNA, H/ACA box 45B
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA62 small nucleolar RNA, H/ACA box 62
SNORA67 small nucleolar RNA, H/ACA box 67
SNORA71A small nucleolar RNA, H/ACA box 71A
SNORA71B small nucleolar RNA, H/ACA box 71B
SNORA71C small nucleolar RNA, H/ACA box 71C
SNORA84 small nucleolar RNA, H/ACA box 84
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SPDYE4 speedy/RINGO cell cycle regulator family member E4
SRP9 signal recognition particle 9kDa
SRPRB signal recognition particle receptor, B subunit
SRSF2 serine/arginine-rich splicing factor 2
SSMEM1 serine-rich single-pass membrane protein 1
TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TARBP1 TAR (HIV-1) RNA binding protein 1
TARS threonyl-tRNA synthetase
TAS2R4 taste receptor, type 2, member 4
TAS2R9 taste receptor, type 2, member 9
TBC1D22A TBC1 domain family, member 22A
TBCE tubulin folding cofactor E
TCP10 t-complex 10
THNSL1 threonine synthase-like 1 (S. cerevisiae)
TKTL2 transketolase-like 2
TLK1 tousled-like kinase 1
TMED6 transmembrane emp24 protein transport domain containing 6
TMEM241 transmembrane protein 241
TMEM81 transmembrane protein 81
TNNI3K TNNI3 interacting kinase
TRABD TraB domain containing
TRIM16L tripartite motif containing 16-like
TTC13 tetratricopeptide repeat domain 13
TTC38 tetratricopeptide repeat domain 38
TTC39C tetratricopeptide repeat domain 39C
TTC4 tetratricopeptide repeat domain 4
TTLL1 tubulin tyrosine ligase-like family member 1
TUBE1 tubulin, epsilon 1
UBE2K ubiquitin-conjugating enzyme E2K
UBE2L3 ubiquitin-conjugating enzyme E2L 3
UBL4A ubiquitin-like 4A
UFM1 ubiquitin-fold modifier 1
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6
UPP2 uridine phosphorylase 2
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
VBP1 von Hippel-Lindau binding protein 1
VMA21 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
ZC3H7B zinc finger CCCH-type containing 7B
ZDHHC8 zinc finger, DHHC-type containing 8
ZFP57 ZFP57 zinc finger protein
ZNF275 zinc finger protein 275
ZNF670 zinc finger protein 670
ZNF695 zinc finger protein 695

low expression

Symbol Name
ARF3 ADP-ribosylation factor 3