Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-8635-01A-11R-2403-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

379 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-8635-01A-11R-2403-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCB8 ATP-binding cassette, sub-family B (MDR/TAP), member 8
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1
ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2
ACTC1 actin, alpha, cardiac muscle 1
ADAM9 ADAM metallopeptidase domain 9
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1
ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif, 15
ADARB1 adenosine deaminase, RNA-specific, B1
ADCY1 adenylate cyclase 1 (brain)
ADGRG4 adhesion G protein-coupled receptor G4
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
AGRN agrin
AJAP1 adherens junctions associated protein 1
AJUBA ajuba LIM protein
ALG10B ALG10B, alpha-1,2-glucosyltransferase
ANKRD13C ankyrin repeat domain 13C
ANO6 anoctamin 6
APP amyloid beta (A4) precursor protein
ARCN1 archain 1
ARHGAP29 Rho GTPase activating protein 29
ARHGDIA Rho GDP dissociation inhibitor (GDI) alpha
ARRDC4 arrestin domain containing 4
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ASB1 ankyrin repeat and SOCS box containing 1
ASIC5 acid sensing (proton gated) ion channel family member 5
ASIP agouti signaling protein
ATAD3B ATPase family, AAA domain containing 3B
ATL3 atlastin GTPase 3
BASP1 brain abundant, membrane attached signal protein 1
BCAP31 B-cell receptor-associated protein 31
BCL9L B-cell CLL/lymphoma 9-like
BEAN1 brain expressed, associated with NEDD4, 1
BMS1P4 BMS1 ribosome biogenesis factor pseudogene 4
BSDC1 BSD domain containing 1
C10ORF35 chromosome 10 open reading frame 35
C10ORF67 chromosome 10 open reading frame 67
C11ORF45 chromosome 11 open reading frame 45
C11ORF57 chromosome 11 open reading frame 57
C12ORF75 chromosome 12 open reading frame 75
C17ORF62 chromosome 17 open reading frame 62
C1GALT1C1 C1GALT1-specific chaperone 1
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2
CANT1 calcium activated nucleotidase 1
CASKIN2 CASK interacting protein 2
CBLN1 cerebellin 1 precursor
CCDC116 coiled-coil domain containing 116
CCDC137 coiled-coil domain containing 137
CCDC54 coiled-coil domain containing 54
CCNDBP1 cyclin D-type binding-protein 1
CD101 CD101 molecule
CEP104 centrosomal protein 104kDa
CEP164 centrosomal protein 164kDa
CHIA chitinase, acidic
CHM choroideremia (Rab escort protein 1)
CHML choroideremia-like (Rab escort protein 2)
CHPF2 chondroitin polymerizing factor 2
CHRNB3 cholinergic receptor, nicotinic, beta 3 (neuronal)
CLCA2 chloride channel accessory 2
CLMP CXADR-like membrane protein
CLSTN1 calsyntenin 1
CNKSR1 connector enhancer of kinase suppressor of Ras 1
CNTN1 contactin 1
COL16A1 collagen, type XVI, alpha 1
COL17A1 collagen, type XVII, alpha 1
COL4A5 collagen, type IV, alpha 5
CPNE3 copine III
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like)
CRYM-AS1 CRYM antisense RNA 1
CSNK1D casein kinase 1, delta
CUL1 cullin 1
CUL5 cullin 5
CXORF40A chromosome X open reading frame 40A
CXORF40B chromosome X open reading frame 40B
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1
DACH2 dachshund family transcription factor 2
DCPS decapping enzyme, scavenger
DDX11L2 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 2
DERL1 derlin 1
DGAT1 diacylglycerol O-acyltransferase 1
DGCR2 DiGeorge syndrome critical region gene 2
DGKD diacylglycerol kinase, delta 130kDa
DHDDS dehydrodolichyl diphosphate synthase
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11
DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16
DNASE1L1 deoxyribonuclease I-like 1
DPAGT1 dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
EFTUD1 elongation factor Tu GTP binding domain containing 1
ELF4 E74-like factor 4 (ets domain transcription factor)
ELL elongation factor RNA polymerase II
EMC1 ER membrane protein complex subunit 1
EML6 echinoderm microtubule associated protein like 6
ENC1 ectodermal-neural cortex 1 (with BTB domain)
ENOX2 ecto-NOX disulfide-thiol exchanger 2
ERAP1 endoplasmic reticulum aminopeptidase 1
FAM114A2 family with sequence similarity 114, member A2
FAM122B family with sequence similarity 122B
FAM173B family with sequence similarity 173, member B
FAM174A family with sequence similarity 174, member A
FAM73A family with sequence similarity 73, member A
FAM76A family with sequence similarity 76, member A
FBXO42 F-box protein 42
FIGN fidgetin
FLNA filamin A, alpha
FOXK2 forkhead box K2
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1
GALNT10 polypeptide N-acetylgalactosaminyltransferase 10
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6
GBP3 guanylate binding protein 3
GIT2 G protein-coupled receptor kinase interacting ArfGAP 2
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1
GOLT1B golgi transport 1B
GRIN3B glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HGS hepatocyte growth factor-regulated tyrosine kinase substrate
HIST1H1T histone cluster 1, H1t
HIST3H3 histone cluster 3, H3
HOXC13 homeobox C13
HSFX2 heat shock transcription factor family, X linked 2
HSPA13 heat shock protein 70kDa family, member 13
HSPG2 heparan sulfate proteoglycan 2
HTR2C 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled
ICMT isoprenylcysteine carboxyl methyltransferase
IDH3G isocitrate dehydrogenase 3 (NAD+) gamma
IDS iduronate 2-sulfatase
IFNA1 interferon, alpha 1
IGFBP3 insulin-like growth factor binding protein 3
IL17RA interleukin 17 receptor A
IL31RA interleukin 31 receptor A
IMPA1 inositol(myo)-1(or 4)-monophosphatase 1
IPO13 importin 13
IPP intracisternal A particle-promoted polypeptide
IRAK1 interleukin-1 receptor-associated kinase 1
IRX1 iroquois homeobox 1
JAG2 jagged 2
KIAA1429 KIAA1429
KIAA2013 KIAA2013
KIF13A kinesin family member 13A
KIF1B kinesin family member 1B
KLF10 Kruppel-like factor 10
KLHL21 kelch-like family member 21
KLHL4 kelch-like family member 4
KMT2A lysine (K)-specific methyltransferase 2A
KPNA6 karyopherin alpha 6 (importin alpha 7)
KRBA1 KRAB-A domain containing 1
LDB1 LIM domain binding 1
LEPROT leptin receptor overlapping transcript
LOC100128076 protein tyrosine phosphatase pseudogene
LOC100128554 uncharacterized LOC100128554
LOC100133050 glucuronidase, beta pseudogene
LOC100190986 uncharacterized LOC100190986
LOC148413 uncharacterized LOC148413
LOC285696 uncharacterized LOC285696
LOC340017 uncharacterized LOC340017
LOC401010 nucleolar complex associated 2 homolog (S. cerevisiae) pseudogene
LOC441454 prothymosin, alpha pseudogene
LOC613037 nuclear pore complex interacting protein pseudogene
LOC728989 phosphodiesterase 4D interacting protein pseudogene
LOC90834
LPPR5 lipid phosphate phosphatase-related protein type 5
LRP11 low density lipoprotein receptor-related protein 11
LRRC3 leucine rich repeat containing 3
LRRC47 leucine rich repeat containing 47
LRRC66 leucine rich repeat containing 66
LZIC leucine zipper and CTNNBIP1 domain containing
MAGEA10 melanoma antigen family A10
MAGEA4 melanoma antigen family A4
MAGEA5 melanoma antigen family A5
MAN1A2 mannosidase, alpha, class 1A, member 2
MAN2A1 mannosidase, alpha, class 2A, member 1
MAP7D3 MAP7 domain containing 3
MARCH6 membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
MASP2 mannan-binding lectin serine peptidase 2
MATN2 matrilin 2
MECP2 methyl CpG binding protein 2
MFN2 mitofusin 2
MFSD11 major facilitator superfamily domain containing 11
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3
MMGT1 membrane magnesium transporter 1
MOSPD1 motile sperm domain containing 1
MROH1 maestro heat-like repeat family member 1
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MTM1 myotubularin 1
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MUSK muscle, skeletal, receptor tyrosine kinase
MYADM myeloid-associated differentiation marker
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1
MYL10 myosin, light chain 10, regulatory
MYO3B myosin IIIB
NANOS1 nanos homolog 1 (Drosophila)
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NFE2L1 nuclear factor, erythroid 2-like 1
NFRKB nuclear factor related to kappaB binding protein
NIPAL3 NIPA-like domain containing 3
NMNAT1 nicotinamide nucleotide adenylyltransferase 1
NOL9 nucleolar protein 9
NOMO1 NODAL modulator 1
NOMO3 NODAL modulator 3
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae)
NPNT nephronectin
NPY4R neuropeptide Y receptor Y4
NRD1 nardilysin (N-arginine dibasic convertase)
OCRL oculocerebrorenal syndrome of Lowe
OPTC opticin
OR10X1 olfactory receptor, family 10, subfamily X, member 1 (gene/pseudogene)
OR13H1 olfactory receptor, family 13, subfamily H, member 1
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2L13 olfactory receptor, family 2, subfamily L, member 13
OR2L1P olfactory receptor, family 2, subfamily L, member 1 pseudogene
OR2L3 olfactory receptor, family 2, subfamily L, member 3
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR2T8 olfactory receptor, family 2, subfamily T, member 8
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OSTM1 osteopetrosis associated transmembrane protein 1
OTUD3 OTU deubiquitinase 3
P4HB prolyl 4-hydroxylase, beta polypeptide
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1
PANK4 pantothenate kinase 4
PDIA4 protein disulfide isomerase family A, member 4
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1
PDZD8 PDZ domain containing 8
PFN1P2 profilin 1 pseudogene 2
PHF6 PHD finger protein 6
PHLDB1 pleckstrin homology-like domain, family B, member 1
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PIEZO1 piezo-type mechanosensitive ion channel component 1
PINK1 PTEN induced putative kinase 1
PIWIL1 piwi-like RNA-mediated gene silencing 1
PKNOX1 PBX/knotted 1 homeobox 1
PLCD4 phospholipase C, delta 4
PLEC plectin
PLEKHA8P1 pleckstrin homology domain containing, family A member 8 pseudogene 1
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2
PLEKHM2 pleckstrin homology domain containing, family M (with RUN domain) member 2
PLXNB3 plexin B3
POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
PRDM2 PR domain containing 2, with ZNF domain
PRDM7 PR domain containing 7
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
PRUNE2 prune homolog 2 (Drosophila)
PSG4 pregnancy specific beta-1-glycoprotein 4
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
PTGFRN prostaglandin F2 receptor inhibitor
RAP2C RAP2C, member of RAS oncogene family
RASA1 RAS p21 protein activator (GTPase activating protein) 1
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2
RBM12B RNA binding motif protein 12B
RBM7 RNA binding motif protein 7
RDX radixin
RECQL RecQ helicase-like
RER1 retention in endoplasmic reticulum sorting receptor 1
REXO2 RNA exonuclease 2
RGMB repulsive guidance molecule family member b
RGPD1 RANBP2-like and GRIP domain containing 1
RHBDF2 rhomboid 5 homolog 2 (Drosophila)
RMDN1 regulator of microtubule dynamics 1
RNF14 ring finger protein 14
RNF34 ring finger protein 34, E3 ubiquitin protein ligase
RPL23AP64 ribosomal protein L23a pseudogene 64
RPS15AP10 ribosomal protein S15a pseudogene 10
RSG1 REM2 and RAB-like small GTPase 1
RTCA RNA 3'-terminal phosphate cyclase
SCAF11 SR-related CTD-associated factor 11
SDF4 stromal cell derived factor 4
SERINC2 serine incorporator 2
SGK3 serum/glucocorticoid regulated kinase family, member 3
SGSH N-sulfoglucosamine sulfohydrolase
SH3PXD2A SH3 and PX domains 2A
SHC1 SHC (Src homology 2 domain containing) transforming protein 1
SIDT2 SID1 transmembrane family, member 2
SIK2 salt-inducible kinase 2
SIK3 SIK family kinase 3
SIN3B SIN3 transcription regulator family member B
SIRT7 sirtuin 7
SKI SKI proto-oncogene
SLC10A3 solute carrier family 10, member 3
SLC16A2 solute carrier family 16, member 2 (thyroid hormone transporter)
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC25A18 solute carrier family 25 (glutamate carrier), member 18
SLC35E2 solute carrier family 35, member E2
SLC35F2 solute carrier family 35, member F2
SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1
SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4
SLC6A11 solute carrier family 6 (neurotransmitter transporter), member 11
SLC7A6 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
SNORA16A small nucleolar RNA, H/ACA box 16A
SNORA66 small nucleolar RNA, H/ACA box 66
SNORD115-26 small nucleolar RNA, C/D box 115-26
SNORD1C small nucleolar RNA, C/D box 1C
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
SPAG1 sperm associated antigen 1
SPEN spen family transcriptional repressor
SPOPL speckle-type POZ protein-like
SRPR signal recognition particle receptor (docking protein)
ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
STK3 serine/threonine kinase 3
STRIP2 striatin interacting protein 2
SYNPO synaptopodin
SYT5 synaptotagmin V
SZRD1 SUZ RNA binding domain containing 1
SZT2 seizure threshold 2 homolog (mouse)
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
TANGO2 transport and golgi organization 2 homolog (Drosophila)
TAOK2 TAO kinase 2
TAS1R2 taste receptor, type 1, member 2
TAS2R3 taste receptor, type 2, member 3
TBRG1 transforming growth factor beta regulator 1
TCEB3 transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)
TDRD6 tudor domain containing 6
TEX261 testis expressed 261
TMED7-TICAM2 TMED7-TICAM2 readthrough
TMEM104 transmembrane protein 104
TMEM167A transmembrane protein 167A
TMEM63B transmembrane protein 63B
TNNI3 troponin I type 3 (cardiac)
TP53TG5 TP53 target 5
TRAK2 trafficking protein, kinesin binding 2
TRIM58 tripartite motif containing 58
TRIM65 tripartite motif containing 65
TRIO trio Rho guanine nucleotide exchange factor
TRPC5 transient receptor potential cation channel, subfamily C, member 5
TSPAN2 tetraspanin 2
TXLNA taxilin alpha
UBE3C ubiquitin protein ligase E3C
UBE4B ubiquitination factor E4B
UBR1 ubiquitin protein ligase E3 component n-recognin 1
UBR4 ubiquitin protein ligase E3 component n-recognin 4
UBR5 ubiquitin protein ligase E3 component n-recognin 5
ULBP3 UL16 binding protein 3
USP25 ubiquitin specific peptidase 25
USP48 ubiquitin specific peptidase 48
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
VAMP3 vesicle-associated membrane protein 3
VMA21 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
VPS13B vacuolar protein sorting 13 homolog B (yeast)
VSIG1 V-set and immunoglobulin domain containing 1
WDFY3-AS2 WDFY3 antisense RNA 2
WDR3 WD repeat domain 3
WNT10A wingless-type MMTV integration site family, member 10A
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase
XKR9 XK, Kell blood group complex subunit-related family, member 9
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3
ZBTB40 zinc finger and BTB domain containing 40
ZDHHC9 zinc finger, DHHC-type containing 9
ZFP42 ZFP42 zinc finger protein
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZFP92 ZFP92 zinc finger protein
ZMYM6 zinc finger, MYM-type 6
ZNF202 zinc finger protein 202
ZNF275 zinc finger protein 275
ZNF282 zinc finger protein 282
ZNF341 zinc finger protein 341
ZNF398 zinc finger protein 398
ZNF425 zinc finger protein 425
ZNF449 zinc finger protein 449
ZNF623 zinc finger protein 623
ZNF707 zinc finger protein 707
ZNF727 zinc finger protein 727
ZNF75D zinc finger protein 75D
ZNF777 zinc finger protein 777
ZNF786 zinc finger protein 786
ZNHIT6 zinc finger, HIT-type containing 6
ZPR1 ZPR1 zinc finger
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1
ZSCAN20 zinc finger and SCAN domain containing 20
ZSCAN29 zinc finger and SCAN domain containing 29
ZSWIM3 zinc finger, SWIM-type containing 3
ZW10 zw10 kinetochore protein

low expression

Symbol Name
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
LSM12 LSM12 homolog (S. cerevisiae)
MTA3 metastasis associated 1 family, member 3
NKIRAS2 NFKB inhibitor interacting Ras-like 2
PAN3 PAN3 poly(A) specific ribonuclease subunit