Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A620-01A-11R-A28V-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

327 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A620-01A-11R-A28V-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1
ABHD16A abhydrolase domain containing 16A
ACE2 angiotensin I converting enzyme 2
ACSL5 acyl-CoA synthetase long-chain family member 5
ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
ADGRF3 adhesion G protein-coupled receptor F3
ADK adenosine kinase
AIM2 absent in melanoma 2
ALMS1P Alstrom syndrome 1 pseudogene
AOX2P aldehyde oxidase 2 pseudogene
APBB3 amyloid beta (A4) precursor protein-binding, family B, member 3
APOL3 apolipoprotein L, 3
APOL4 apolipoprotein L, 4
APOL6 apolipoprotein L, 6
ARHGAP20 Rho GTPase activating protein 20
ASAP1-IT1 ASAP1 intronic transcript 1
ATAD1 ATPase family, AAA domain containing 1
ATP6V0E1 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1
B2M beta-2-microglobulin
BAK1 BCL2-antagonist/killer 1
BATF2 basic leucine zipper transcription factor, ATF-like 2
BBIP1 BBSome interacting protein 1
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
BCCIP BRCA2 and CDKN1A interacting protein
BCL2L14 BCL2-like 14 (apoptosis facilitator)
BCYRN1 brain cytoplasmic RNA 1
BLOC1S2 biogenesis of lysosomal organelles complex-1, subunit 2
BOLA3 bolA family member 3
BST2 bone marrow stromal cell antigen 2
BTN3A1 butyrophilin, subfamily 3, member A1
BTN3A2 butyrophilin, subfamily 3, member A2
BTN3A3 butyrophilin, subfamily 3, member A3
BUB3 BUB3 mitotic checkpoint protein
C10ORF131 chromosome 10 open reading frame 131
C10ORF2 chromosome 10 open reading frame 2
C10ORF54 chromosome 10 open reading frame 54
C10ORF55 chromosome 10 open reading frame 55
C10ORF67 chromosome 10 open reading frame 67
C16ORF52 chromosome 16 open reading frame 52
C1GALT1C1 C1GALT1-specific chaperone 1
C20ORF144 chromosome 20 open reading frame 144
C3ORF79 chromosome 3 open reading frame 79
C5ORF56 chromosome 5 open reading frame 56
C6ORF47 chromosome 6 open reading frame 47
C6ORF62 chromosome 6 open reading frame 62
C7ORF43 chromosome 7 open reading frame 43
C9ORF85 chromosome 9 open reading frame 85
CAMK2N2 calcium/calmodulin-dependent protein kinase II inhibitor 2
CARD17 caspase recruitment domain family, member 17
CASP1 caspase 1, apoptosis-related cysteine peptidase
CASP7 caspase 7, apoptosis-related cysteine peptidase
CATSPER2P1 cation channel, sperm associated 2 pseudogene 1
CD40 CD40 molecule, TNF receptor superfamily member 5
CHCHD1 coiled-coil-helix-coiled-coil-helix domain containing 1
CHMP5 charged multivesicular body protein 5
CIITA class II, major histocompatibility complex, transactivator
CKMT1A creatine kinase, mitochondrial 1A
CLEC2D C-type lectin domain family 2, member D
CMPK2 cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
CMTR1 cap methyltransferase 1
CPA4 carboxypeptidase A4
CTSV cathepsin V
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
CX3CL1 chemokine (C-X3-C motif) ligand 1
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL11 chemokine (C-X-C motif) ligand 11
CXCL9 chemokine (C-X-C motif) ligand 9
CYCS cytochrome c, somatic
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
DEC1 deleted in esophageal cancer 1
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
DEFB119 defensin, beta 119
DESI1 desumoylating isopeptidase 1
DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12
DPY30 dpy-30 homolog (C. elegans)
DUSP5 dual specificity phosphatase 5
DYNLT1 dynein, light chain, Tctex-type 1
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
EIF5A eukaryotic translation initiation factor 5A
EIF5AL1 eukaryotic translation initiation factor 5A-like 1
EMC7 ER membrane protein complex subunit 7
EPSTI1 epithelial stromal interaction 1 (breast)
ERH enhancer of rudimentary homolog (Drosophila)
ETV7 ets variant 7
EXOSC1 exosome component 1
FAM175B family with sequence similarity 175, member B
FAM35BP family with sequence similarity 35, member A pseudogene
FAM35DP family with sequence similarity 35, member A pseudogene
FAM78B family with sequence similarity 78, member B
FAS Fas cell surface death receptor
FBXO6 F-box protein 6
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1
FLJ12825 uncharacterized LOC440101
FOXN2 forkhead box N2
FUOM fucose mutarotase
GBP1 guanylate binding protein 1, interferon-inducible
GBP2 guanylate binding protein 2, interferon-inducible
GBP4 guanylate binding protein 4
GBP5 guanylate binding protein 5
GHITM growth hormone inducible transmembrane protein
GNLY granulysin
GRPEL1 GrpE-like 1, mitochondrial (E. coli)
GSTO1 glutathione S-transferase omega 1
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa
GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
H2AFY H2A histone family, member Y
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HBBP1 hemoglobin, beta pseudogene 1
HCCS holocytochrome c synthase
HCG4B HLA complex group 4B (non-protein coding)
HCP5 HLA complex P5 (non-protein coding)
HIATL2 hippocampus abundant transcript-like 2
HIST1H2AC histone cluster 1, H2ac
HLA-DMA major histocompatibility complex, class II, DM alpha
HLA-DOB major histocompatibility complex, class II, DO beta
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRA major histocompatibility complex, class II, DR alpha
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-F major histocompatibility complex, class I, F
HLA-J major histocompatibility complex, class I, J (pseudogene)
HPS1 Hermansky-Pudlak syndrome 1
HPS6 Hermansky-Pudlak syndrome 6
HSH2D hematopoietic SH2 domain containing
IFI44 interferon-induced protein 44
IFI44L interferon-induced protein 44-like
IFIT1 interferon-induced protein with tetratricopeptide repeats 1
IFIT1B interferon-induced protein with tetratricopeptide repeats 1B
IFIT2 interferon-induced protein with tetratricopeptide repeats 2
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFIT5 interferon-induced protein with tetratricopeptide repeats 5
IFITM1 interferon induced transmembrane protein 1
IFITM3 interferon induced transmembrane protein 3
IFNB1 interferon, beta 1, fibroblast
IFNE interferon, epsilon
IFNL1 interferon, lambda 1
IFNL2 interferon, lambda 2
IFNL3 interferon, lambda 3
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL12RB1 interleukin 12 receptor, beta 1
IL18BP interleukin 18 binding protein
IL18RAP interleukin 18 receptor accessory protein
IL7 interleukin 7
IRF1 interferon regulatory factor 1
IRF9 interferon regulatory factor 9
ISG20 interferon stimulated exonuclease gene 20kDa
ITPRIP inositol 1,4,5-trisphosphate receptor interacting protein
KCTD19 potassium channel tetramerization domain containing 19
KIR2DL4 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 4
KIR3DL3 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3
KLF14 Kruppel-like factor 14
KLK5 kallikrein-related peptidase 5
KLRC1 killer cell lectin-like receptor subfamily C, member 1
KLRC2 killer cell lectin-like receptor subfamily C, member 2
LAP3 leucine aminopeptidase 3
LILRP2 leukocyte immunoglobulin-like receptor pseudogene 2
LINC00520 long intergenic non-protein coding RNA 520
LOC143188 uncharacterized LOC143188
LY6E lymphocyte antigen 6 complex, locus E
MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3
MARCH5 membrane-associated ring finger (C3HC4) 5
MCTS1 malignant T cell amplified sequence 1
METTL10 methyltransferase like 10
MINPP1 multiple inositol-polyphosphate phosphatase 1
MITD1 MIT, microtubule interacting and transport, domain containing 1
MMP25 matrix metallopeptidase 25
MRGPRX2 MAS-related GPR, member X2
MRPL15 mitochondrial ribosomal protein L15
MRPS16 mitochondrial ribosomal protein S16
MRPS22 mitochondrial ribosomal protein S22
MSRB1 methionine sulfoxide reductase B1
MTERF3 mitochondrial transcription termination factor 3
MX1 MX dynamin-like GTPase 1
MX2 MX dynamin-like GTPase 2
NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NBN nibrin
NDST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOL12 nucleolar protein 12
NOLC1 nucleolar and coiled-body phosphoprotein 1
NRBF2 nuclear receptor binding factor 2
NRBP1 nuclear receptor binding protein 1
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae)
NT5C3A 5'-nucleotidase, cytosolic IIIA
NT5E 5'-nucleotidase, ecto (CD73)
NUBP1 nucleotide binding protein 1
NUDCD1 NudC domain containing 1
NUTM2D NUT family member 2D
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa
OASL 2'-5'-oligoadenylate synthetase-like
OR10G2 olfactory receptor, family 10, subfamily G, member 2
OR2J3 olfactory receptor, family 2, subfamily J, member 3
OR2T33 olfactory receptor, family 2, subfamily T, member 33
OR4D6 olfactory receptor, family 4, subfamily D, member 6
OR51M1 olfactory receptor, family 51, subfamily M, member 1
OR52A4P olfactory receptor, family 52, subfamily A, member 4, pseudogene
OR52N5 olfactory receptor, family 52, subfamily N, member 5
OR6K2 olfactory receptor, family 6, subfamily K, member 2
OR7D2 olfactory receptor, family 7, subfamily D, member 2
PARN poly(A)-specific ribonuclease
PARP14 poly (ADP-ribose) polymerase family, member 14
PARP8 poly (ADP-ribose) polymerase family, member 8
PATL2 protein associated with topoisomerase II homolog 2 (yeast)
PCGF5 polycomb group ring finger 5
PDLIM1 PDZ and LIM domain 1
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1
PFDN1 prefoldin subunit 1
PHF11 PHD finger protein 11
PI4K2A phosphatidylinositol 4-kinase type 2 alpha
PLSCR1 phospholipid scramblase 1
PML promyelocytic leukemia
PNLIPRP3 pancreatic lipase-related protein 3
PNPT1 polyribonucleotide nucleotidyltransferase 1
POLL polymerase (DNA directed), lambda
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
POLR3K polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa
POMP proteasome maturation protein
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PPA1 pyrophosphatase (inorganic) 1
PPP2R2D protein phosphatase 2, regulatory subunit B, delta
PRF1 perforin 1 (pore forming protein)
PRR13 proline rich 13
PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2
PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4
PSMA5 proteasome (prosome, macropain) subunit, alpha type, 5
PSMB10 proteasome (prosome, macropain) subunit, beta type, 10
PSMB8 proteasome (prosome, macropain) subunit, beta type, 8
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
PSTK phosphoseryl-tRNA kinase
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
RIPK2 receptor-interacting serine-threonine kinase 2
RNASEH1 ribonuclease H1
RNF114 ring finger protein 114
RNPS1 RNA binding protein S1, serine-rich domain
ROGDI rogdi homolog (Drosophila)
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
RSAD2 radical S-adenosyl methionine domain containing 2
RTP4 receptor (chemosensory) transporter protein 4
S100P S100 calcium binding protein P
SAMD9L sterile alpha motif domain containing 9-like
SAR1A secretion associated, Ras related GTPase 1A
SCO1 SCO1 cytochrome c oxidase assembly protein
SEBOX SEBOX homeobox
SECTM1 secreted and transmembrane 1
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
SFR1 SWI5-dependent recombination repair 1
SH3KBP1 SH3-domain kinase binding protein 1
SLC15A3 solute carrier family 15 (oligopeptide transporter), member 3
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16
SLC25A28 solute carrier family 25 (mitochondrial iron transporter), member 28
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC39A2 solute carrier family 39 (zinc transporter), member 2
SLC4A1AP solute carrier family 4 (anion exchanger), member 1, adaptor protein
SNORA20 small nucleolar RNA, H/ACA box 20
SNORA52 small nucleolar RNA, H/ACA box 52
SNORA5A small nucleolar RNA, H/ACA box 5A
SRP19 signal recognition particle 19kDa
STAMBP STAM binding protein
STAMBPL1 STAM binding protein-like 1
STARD5 StAR-related lipid transfer (START) domain containing 5
STOML1 stomatin (EPB72)-like 1
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae)
SYS1-DBNDD2 SYS1-DBNDD2 readthrough (NMD candidate)
TAC4 tachykinin 4 (hemokinin)
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
TAPBPL TAP binding protein-like
THG1L tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1
TMCC3 transmembrane and coiled-coil domain family 3
TMEM105 transmembrane protein 105
TMEM229B transmembrane protein 229B
TMEM70 transmembrane protein 70
TNFAIP8 tumor necrosis factor, alpha-induced protein 8
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TOP1P2 topoisomerase (DNA) I pseudogene 2
TOR2A torsin family 2, member A
TRAFD1 TRAF-type zinc finger domain containing 1
TRAPPC3L trafficking protein particle complex 3-like
TRIM21 tripartite motif containing 21
TRIM22 tripartite motif containing 22
TRIM38 tripartite motif containing 38
TRIM5 tripartite motif containing 5
TRIM69 tripartite motif containing 69
TRMT44 tRNA methyltransferase 44 homolog (S. cerevisiae)
TTC1 tetratricopeptide repeat domain 1
TTC31 tetratricopeptide repeat domain 31
TXNDC2 thioredoxin domain containing 2 (spermatozoa)
UBE2D1 ubiquitin-conjugating enzyme E2D 1
UBE2I ubiquitin-conjugating enzyme E2I
UBE2L6 ubiquitin-conjugating enzyme E2L 6
UBQLNL ubiquilin-like
USMG5 up-regulated during skeletal muscle growth 5 homolog (mouse)
USP18 ubiquitin specific peptidase 18
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
VDAC2 voltage-dependent anion channel 2
VPS26A vacuolar protein sorting 26 homolog A (S. pombe)
VSNL1 visinin-like 1
VTI1A vesicle transport through interaction with t-SNAREs 1A
WARS tryptophanyl-tRNA synthetase
WBP4 WW domain binding protein 4
WDR11 WD repeat domain 11
XAF1 XIAP associated factor 1
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
ZBP1 Z-DNA binding protein 1
ZDHHC6 zinc finger, DHHC-type containing 6
ZFYVE27 zinc finger, FYVE domain containing 27
ZMAT2 zinc finger, matrin-type 2
ZMYND15 zinc finger, MYND-type containing 15
ZNF311 zinc finger protein 311
ZNF707 zinc finger protein 707
ZNFX1 zinc finger, NFX1-type containing 1
ZUFSP zinc finger with UFM1-specific peptidase domain

low expression

Symbol Name
FAM168B family with sequence similarity 168, member B
GORASP2 golgi reassembly stacking protein 2, 55kDa
RUNDC1 RUN domain containing 1
WDR33 WD repeat domain 33