Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A61W-01A-11R-A28V-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

364 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A61W-01A-11R-A28V-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A1BG-AS1 A1BG antisense RNA 1
AASDH aminoadipate-semialdehyde dehydrogenase
ACOT11 acyl-CoA thioesterase 11
ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ADAM20 ADAM metallopeptidase domain 20
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide
ADK adenosine kinase
AGO3 argonaute RISC catalytic component 3
AJUBA ajuba LIM protein
AKIRIN1 akirin 1
AKT1S1 AKT1 substrate 1 (proline-rich)
ALG12 ALG12, alpha-1,6-mannosyltransferase
ANAPC4 anaphase promoting complex subunit 4
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APLF aprataxin and PNKP like factor
ARNTL aryl hydrocarbon receptor nuclear translocator-like
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa
ASCC1 activating signal cointegrator 1 complex subunit 1
ATAD3B ATPase family, AAA domain containing 3B
ATF7IP activating transcription factor 7 interacting protein
BASP1 brain abundant, membrane attached signal protein 1
BBS4 Bardet-Biedl syndrome 4
BCAM basal cell adhesion molecule (Lutheran blood group)
BPGM 2,3-bisphosphoglycerate mutase
BRD9 bromodomain containing 9
C10ORF55 chromosome 10 open reading frame 55
C11ORF45 chromosome 11 open reading frame 45
C12ORF65 chromosome 12 open reading frame 65
C16ORF87 chromosome 16 open reading frame 87
C17ORF85 chromosome 17 open reading frame 85
C1ORF109 chromosome 1 open reading frame 109
C1QBP complement component 1, q subcomponent binding protein
C7ORF33 chromosome 7 open reading frame 33
CAMTA2 calmodulin binding transcription activator 2
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast)
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1
CARD10 caspase recruitment domain family, member 10
CBWD5 COBW domain containing 5
CCDC127 coiled-coil domain containing 127
CCDC15 coiled-coil domain containing 15
CCDC163P coiled-coil domain containing 163, pseudogene
CCDC18 coiled-coil domain containing 18
CCDC23 coiled-coil domain containing 23
CCDC3 coiled-coil domain containing 3
CCT5 chaperonin containing TCP1, subunit 5 (epsilon)
CDC123 cell division cycle 123
CDCA8 cell division cycle associated 8
CENPBD1 CENPB DNA-binding domains containing 1
CHD3 chromodomain helicase DNA binding protein 3
CHODL-AS1 CHODL antisense RNA 1
CKAP4 cytoskeleton-associated protein 4
CLMP CXADR-like membrane protein
CNTROB centrobin, centrosomal BRCA2 interacting protein
COMMD8 COMM domain containing 8
CSMD2 CUB and Sushi multiple domains 2
CSPG4 chondroitin sulfate proteoglycan 4
CTBS chitobiase, di-N-acetyl-
CTC1 CTS telomere maintenance complex component 1
CTDNEP1 CTD nuclear envelope phosphatase 1
CTPS1 CTP synthase 1
CTSL3P cathepsin L family member 3, pseudogene
CYB5D1 cytochrome b5 domain containing 1
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1
CYP27C1 cytochrome P450, family 27, subfamily C, polypeptide 1
DAP death-associated protein
DCAF4 DDB1 and CUL4 associated factor 4
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DEC1 deleted in esophageal cancer 1
DEPDC7 DEP domain containing 7
DERL2 derlin 2
DGCR11 DiGeorge syndrome critical region gene 11 (non-protein coding)
DIRC3 disrupted in renal carcinoma 3
DKFZP434K028 uncharacterized LOC26070
DKK3 dickkopf WNT signaling pathway inhibitor 3
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11
DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8
DPAGT1 dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
DSCC1 DNA replication and sister chromatid cohesion 1
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
DXO decapping exoribonuclease
EBNA1BP2 EBNA1 binding protein 2
EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
EIF4A1 eukaryotic translation initiation factor 4A1
EIF5A eukaryotic translation initiation factor 5A
EIF5AL1 eukaryotic translation initiation factor 5A-like 1
ERMAP erythroblast membrane-associated protein (Scianna blood group)
ETAA1 Ewing tumor-associated antigen 1
EXO5 exonuclease 5
EXT1 exostosin glycosyltransferase 1
EXTL2 exostosin-like glycosyltransferase 2
FABP1 fatty acid binding protein 1, liver
FAM101B family with sequence similarity 101, member B
FAM173B family with sequence similarity 173, member B
FAM19A3 family with sequence similarity 19 (chemokine (C-C motif)-like), member A3
FAM58BP cyclin-related protein FAM58B
FAM64A family with sequence similarity 64, member A
FBXL18 F-box and leucine-rich repeat protein 18
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
FDXACB1 ferredoxin-fold anticodon binding domain containing 1
FEZ1 fasciculation and elongation protein zeta 1 (zygin I)
FGF11 fibroblast growth factor 11
FGFR1OP FGFR1 oncogene partner
FGGY FGGY carbohydrate kinase domain containing
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1
FLJ30679 uncharacterized protein FLJ30679
FXR2 fragile X mental retardation, autosomal homolog 2
GALNS galactosamine (N-acetyl)-6-sulfatase
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18
GANC glucosidase, alpha; neutral C
GATA3 GATA binding protein 3
GATB glutamyl-tRNA(Gln) amidotransferase, subunit B
GPR89B G protein-coupled receptor 89B
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
GTF2IP1 general transcription factor IIi pseudogene 1
GTPBP4 GTP binding protein 4
HAT1 histone acetyltransferase 1
HCCAT5 hepatocellular carcinoma associated transcript 5 (non-protein coding)
HECTD3 HECT domain containing E3 ubiquitin protein ligase 3
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4
HIATL2 hippocampus abundant transcript-like 2
HIST1H2AC histone cluster 1, H2ac
HIST1H2BO histone cluster 1, H2bo
HIST1H4F histone cluster 1, H4f
HIST1H4H histone cluster 1, H4h
HIST1H4K histone cluster 1, H4k
HPS6 Hermansky-Pudlak syndrome 6
HTRA1 HtrA serine peptidase 1
HULC hepatocellular carcinoma up-regulated long non-coding RNA
HYI hydroxypyruvate isomerase (putative)
IGFL4 IGF-like family member 4
IMPACT impact RWD domain protein
IPO13 importin 13
IQCA1 IQ motif containing with AAA domain 1
IRX1 iroquois homeobox 1
IVNS1ABP influenza virus NS1A binding protein
KATNA1 katanin p60 (ATPase containing) subunit A 1
KCNF1 potassium channel, voltage gated modifier subfamily F, member 1
KDM4A lysine (K)-specific demethylase 4A
KIAA0753 KIAA0753
KIAA1644 KIAA1644
KIN Kin17 DNA and RNA binding protein
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)
L1TD1 LINE-1 type transposase domain containing 1
LARP7 La ribonucleoprotein domain family, member 7
LDB1 LIM domain binding 1
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
LGALS9B lectin, galactoside-binding, soluble, 9B
LGALS9C lectin, galactoside-binding, soluble, 9C
LINC00174 long intergenic non-protein coding RNA 174
LOC148696 uncharacterized LOC148696
LOC152225 uncharacterized LOC152225
LRRC3 leucine rich repeat containing 3
LRRC42 leucine rich repeat containing 42
LRRC57 leucine rich repeat containing 57
LRRC8D leucine rich repeat containing 8 family, member D
MATN1 matrilin 1, cartilage matrix protein
MEAF6 MYST/Esa1-associated factor 6
MED11 mediator complex subunit 11
MED31 mediator complex subunit 31
MESDC2 mesoderm development candidate 2
METAP2 methionyl aminopeptidase 2
MFAP1 microfibrillar-associated protein 1
MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
MORF4 mortality factor 4 (pseudogene)
MORF4L1 mortality factor 4 like 1
MRPL16 mitochondrial ribosomal protein L16
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MRPS10 mitochondrial ribosomal protein S10
MSL3P1 male-specific lethal 3 homolog (Drosophila) pseudogene 1
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MUTYH mutY homolog
MYBBP1A MYB binding protein (P160) 1a
MYCBP MYC binding protein
NCL nucleolin
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2
NEURL4 neuralized E3 ubiquitin protein ligase 4
NFYC nuclear transcription factor Y, gamma
NGF nerve growth factor (beta polypeptide)
NHEJ1 nonhomologous end-joining factor 1
NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1
NIPA2 non imprinted in Prader-Willi/Angelman syndrome 2
NKAPL NFKB activating protein-like
NLRP1 NLR family, pyrin domain containing 1
NMNAT1 nicotinamide nucleotide adenylyltransferase 1
NOL10 nucleolar protein 10
NOP58 NOP58 ribonucleoprotein
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NPTN neuroplastin
NPY4R neuropeptide Y receptor Y4
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
NT5E 5'-nucleotidase, ecto (CD73)
NTSR1 neurotensin receptor 1 (high affinity)
NUAK1 NUAK family, SNF1-like kinase, 1
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3
NUDT5 nudix (nucleoside diphosphate linked moiety X)-type motif 5
NUTM2G NUT family member 2G
ODC1 ornithine decarboxylase 1
ODF2L outer dense fiber of sperm tails 2-like
OR2T8 olfactory receptor, family 2, subfamily T, member 8
OR2W3 olfactory receptor, family 2, subfamily W, member 3
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form)
PAK1IP1 PAK1 interacting protein 1
PCDHGB5 protocadherin gamma subfamily B, 5
PCSK7 proprotein convertase subtilisin/kexin type 7
PDCD6 programmed cell death 6
PDGFA platelet-derived growth factor alpha polypeptide
PDIA3 protein disulfide isomerase family A, member 3
PDIA3P1 protein disulfide isomerase family A, member 3 pseudogene 1
PFAS phosphoribosylformylglycinamidine synthase
PFN1 profilin 1
PHF23 PHD finger protein 23
PI4K2B phosphatidylinositol 4-kinase type 2 beta
PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta
PITPNB phosphatidylinositol transfer protein, beta
PLAU plasminogen activator, urokinase
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific)
PLEK2 pleckstrin 2
PLSCR3 phospholipid scramblase 3
PNLDC1 poly(A)-specific ribonuclease (PARN)-like domain containing 1
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PORCN porcupine homolog (Drosophila)
POU3F1 POU class 3 homeobox 1
PPIAL4C peptidylprolyl isomerase A (cyclophilin A)-like 4C
PPIE peptidylprolyl isomerase E (cyclophilin E)
PPP2R2D protein phosphatase 2, regulatory subunit B, delta
PRIMPOL primase and polymerase (DNA-directed)
PRKCQ protein kinase C, theta
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PWP1 PWP1 homolog (S. cerevisiae)
PXN paxillin
RABEP1 rabaptin, RAB GTPase binding effector protein 1
RAN RAN, member RAS oncogene family
RBM17 RNA binding motif protein 17
RBPJ recombination signal binding protein for immunoglobulin kappa J region
REXO2 RNA exonuclease 2
RGPD1 RANBP2-like and GRIP domain containing 1
RIC8A RIC8 guanine nucleotide exchange factor A
RNF167 ring finger protein 167
RNF220 ring finger protein 220
RNF34 ring finger protein 34, E3 ubiquitin protein ligase
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2
RUFY1 RUN and FYVE domain containing 1
SCMH1 sex comb on midleg homolog 1 (Drosophila)
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SENP3 SUMO1/sentrin/SMT3 specific peptidase 3
SEPHS2 selenophosphate synthetase 2
SERHL2 serine hydrolase-like 2
SF3A3 splicing factor 3a, subunit 3, 60kDa
SH2D5 SH2 domain containing 5
SIRT4 sirtuin 4
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2
SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
SNAP23 synaptosomal-associated protein, 23kDa
SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa
SNIP1 Smad nuclear interacting protein 1
SNORA40 small nucleolar RNA, H/ACA box 40
SNORA5A small nucleolar RNA, H/ACA box 5A
SNORA5C small nucleolar RNA, H/ACA box 5C
SOX15 SRY (sex determining region Y)-box 15
SP140L SP140 nuclear body protein-like
SPDL1 spindle apparatus coiled-coil protein 1
SSX6 synovial sarcoma, X breakpoint 6 (pseudogene)
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
STIM2 stromal interaction molecule 2
STK25 serine/threonine kinase 25
STOML1 stomatin (EPB72)-like 1
SUMO1P3 SUMO1 pseudogene 3 (functional)
SZRD1 SUZ RNA binding domain containing 1
TAC4 tachykinin 4 (hemokinin)
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
TAF13 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TBC1D19 TBC1 domain family, member 19
TBC1D2B TBC1 domain family, member 2B
TBCK TBC1 domain containing kinase
TCEB3 transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)
TES testin LIM domain protein
THEM4 thioesterase superfamily member 4
TM2D1 TM2 domain containing 1
TMEM107 transmembrane protein 107
TMEM237 transmembrane protein 237
TMEM87A transmembrane protein 87A
TNK1 tyrosine kinase, non-receptor, 1
TOE1 target of EGR1, member 1 (nuclear)
TP53AIP1 tumor protein p53 regulated apoptosis inducing protein 1
TPBG trophoblast glycoprotein
TRAPPC3 trafficking protein particle complex 3
TRIM58 tripartite motif containing 58
TRIT1 tRNA isopentenyltransferase 1
TRNAU1AP tRNA selenocysteine 1 associated protein 1
TTC12 tetratricopeptide repeat domain 12
TTL tubulin tyrosine ligase
TUBB tubulin, beta class I
UBA6 ubiquitin-like modifier activating enzyme 6
UBLCP1 ubiquitin-like domain containing CTD phosphatase 1
UIMC1 ubiquitin interaction motif containing 1
ULBP3 UL16 binding protein 3
ULK2 unc-51 like autophagy activating kinase 2
UROD uroporphyrinogen decarboxylase
USP48 ubiquitin specific peptidase 48
UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein (yeast)
UTS2 urotensin 2
VEGFC vascular endothelial growth factor C
VEZT vezatin, adherens junctions transmembrane protein
VPS26A vacuolar protein sorting 26 homolog A (S. pombe)
WNT10A wingless-type MMTV integration site family, member 10A
WNT3 wingless-type MMTV integration site family, member 3
WNT3A wingless-type MMTV integration site family, member 3A
WNT4 wingless-type MMTV integration site family, member 4
YBX1 Y box binding protein 1
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing
ZCCHC4 zinc finger, CCHC domain containing 4
ZDHHC16 zinc finger, DHHC-type containing 16
ZDHHC6 zinc finger, DHHC-type containing 6
ZFP28 ZFP28 zinc finger protein
ZFP42 ZFP42 zinc finger protein
ZFP82 ZFP82 zinc finger protein
ZMPSTE24 zinc metallopeptidase STE24
ZNF132 zinc finger protein 132
ZNF135 zinc finger protein 135
ZNF229 zinc finger protein 229
ZNF329 zinc finger protein 329
ZNF382 zinc finger protein 382
ZNF415 zinc finger protein 415
ZNF418 zinc finger protein 418
ZNF454 zinc finger protein 454
ZNF487 zinc finger protein 487
ZNF542P zinc finger protein 542, pseudogene
ZNF578 zinc finger protein 578
ZNF582 zinc finger protein 582
ZNF583 zinc finger protein 583
ZNF610 zinc finger protein 610
ZNF649 zinc finger protein 649
ZNF665 zinc finger protein 665
ZNF677 zinc finger protein 677
ZNF684 zinc finger protein 684
ZNF702P zinc finger protein 702, pseudogene
ZNF75A zinc finger protein 75a
ZNF788 zinc finger family member 788
ZNF793 zinc finger protein 793
ZNF880 zinc finger protein 880
ZSCAN18 zinc finger and SCAN domain containing 18
ZSCAN31 zinc finger and SCAN domain containing 31
ZW10 zw10 kinetochore protein

low expression

Symbol Name
ALPK1 alpha-kinase 1
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2
CSRNP2 cysteine-serine-rich nuclear protein 2
DAZAP2 DAZ associated protein 2
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1
GOSR1 golgi SNAP receptor complex member 1
PARD6G par-6 family cell polarity regulator gamma
RABGAP1 RAB GTPase activating protein 1
RUNDC1 RUN domain containing 1
SLC44A2 solute carrier family 44 (choline transporter), member 2
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
UBXN2B UBX domain protein 2B