Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-8568-01A-11R-2403-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

338 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-8568-01A-11R-2403-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ABCA10 ATP-binding cassette, sub-family A (ABC1), member 10
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase
ACD adrenocortical dysplasia homolog (mouse)
ACTRT3 actin-related protein T3
ADAM15 ADAM metallopeptidase domain 15
ADAM9 ADAM metallopeptidase domain 9
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1
ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4
ADCY7 adenylate cyclase 7
ADGRE3 adhesion G protein-coupled receptor E3
ADRB2 adrenoceptor beta 2, surface
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
AMELY amelogenin, Y-linked
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
ANKUB1 ankyrin repeat and ubiquitin domain containing 1
ATF3 activating transcription factor 3
ATXN1L ataxin 1-like
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1
BBS2 Bardet-Biedl syndrome 2
BCL6B B-cell CLL/lymphoma 6, member B
BMP1 bone morphogenetic protein 1
BMP2 bone morphogenetic protein 2
BOP1 block of proliferation 1
BRD7P3 bromodomain containing 7 pseudogene 3
BRIX1 BRX1, biogenesis of ribosomes
BTNL3 butyrophilin-like 3
C15ORF54 chromosome 15 open reading frame 54
C5AR1 complement component 5a receptor 1
C5ORF28 chromosome 5 open reading frame 28
CAV1 caveolin 1, caveolae protein, 22kDa
CBFB core-binding factor, beta subunit
CCL3L3 chemokine (C-C motif) ligand 3-like 3
CCNL1 cyclin L1
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae)
CCT5 chaperonin containing TCP1, subunit 5 (epsilon)
CD300E CD300e molecule
CD300LD CD300 molecule-like family member d
CD320 CD320 molecule
CDC14A cell division cycle 14A
CDCA2 cell division cycle associated 2
CDH13 cadherin 13
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CENPE centromere protein E, 312kDa
CENPI centromere protein I
CENPN centromere protein N
CFAP20 cilia and flagella associated protein 20
CHD9 chromodomain helicase DNA binding protein 9
CHRDL2 chordin-like 2
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CIAPIN1 cytokine induced apoptosis inhibitor 1
CIRH1A cirrhosis, autosomal recessive 1A (cirhin)
CIZ1 CDKN1A interacting zinc finger protein 1
CKLF chemokine-like factor
CLCF1 cardiotrophin-like cytokine factor 1
CLEC17A C-type lectin domain family 17, member A
CLEC4G C-type lectin domain family 4, member G
CLPTM1L CLPTM1-like
CMTM1 CKLF-like MARVEL transmembrane domain containing 1
CMTM2 CKLF-like MARVEL transmembrane domain containing 2
CMTM4 CKLF-like MARVEL transmembrane domain containing 4
CMTR2 cap methyltransferase 2
CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1
CNGB1 cyclic nucleotide gated channel beta 1
COL13A1 collagen, type XIII, alpha 1
COL15A1 collagen, type XV, alpha 1
COL4A5 collagen, type IV, alpha 5
COL4A6 collagen, type IV, alpha 6
COLGALT1 collagen beta(1-O)galactosyltransferase 1
COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
CPNE2 copine II
CSDC2 cold shock domain containing C2, RNA binding
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CSF3R colony stimulating factor 3 receptor (granulocyte)
CSMD3 CUB and Sushi multiple domains 3
CSNK1G2-AS1 CSNK1G2 antisense RNA 1
CSNK2A2 casein kinase 2, alpha prime polypeptide
CSPG4 chondroitin sulfate proteoglycan 4
CTRL chymotrypsin-like
CXCL2 chemokine (C-X-C motif) ligand 2
CXCL3 chemokine (C-X-C motif) ligand 3
CXCR1 chemokine (C-X-C motif) receptor 1
DCLK3 doublecortin-like kinase 3
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B
DEFB109P1 defensin, beta 109, pseudogene 1
DENND4B DENN/MADD domain containing 4B
DGKK diacylglycerol kinase, kappa
DHODH dihydroorotate dehydrogenase (quinone)
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38
DKC1 dyskeratosis congenita 1, dyskerin
DLL1 delta-like 1 (Drosophila)
DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2
DROSHA drosha, ribonuclease type III
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2
DYRK3 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
E2F4 E2F transcription factor 4, p107/p130-binding
EDC4 enhancer of mRNA decapping 4
EDN1 endothelin 1
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1
EGR3 early growth response 3
EGR4 early growth response 4
ELMO1 engulfment and cell motility 1
EMC1 ER membrane protein complex subunit 1
ERF Ets2 repressor factor
EXOSC6 exosome component 6
EXTL3 exostosin-like glycosyltransferase 3
F3 coagulation factor III (thromboplastin, tissue factor)
FAM105A family with sequence similarity 105, member A
FAM53C family with sequence similarity 53, member C
FAM92A1P2 family with sequence similarity 92, member A3
FAT1 FAT atypical cadherin 1
FBXL6 F-box and leucine-rich repeat protein 6
FCAR Fc fragment of IgA receptor
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
FCN1 ficolin (collagen/fibrinogen domain containing) 1
FGFBP1 fibroblast growth factor binding protein 1
FHOD1 formin homology 2 domain containing 1
FIGN fidgetin
FLJ30679 uncharacterized protein FLJ30679
FLJ34503 uncharacterized FLJ34503
FLNA filamin A, alpha
FOSB FBJ murine osteosarcoma viral oncogene homolog B
FOSL1 FOS-like antigen 1
FPR1 formyl peptide receptor 1
FST follistatin
GABRA6 gamma-aminobutyric acid (GABA) A receptor, alpha 6
GAL galanin/GMAP prepropeptide
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14
GINS3 GINS complex subunit 3 (Psf3 homolog)
GLA galactosidase, alpha
GLG1 golgi glycoprotein 1
GPR142 G protein-coupled receptor 142
GPR89B G protein-coupled receptor 89B
GRM2 glutamate receptor, metabotropic 2
HBEGF heparin-binding EGF-like growth factor
HCAR3 hydroxycarboxylic acid receptor 3
HEATR3 HEAT repeat containing 3
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
HSPA8 heat shock 70kDa protein 8
HUS1B HUS1 checkpoint homolog b (S. pombe)
HYOU1 hypoxia up-regulated 1
ICE1 interactor of little elongation complex ELL subunit 1
IL11 interleukin 11
IL4 interleukin 4
IL6 interleukin 6
IL7R interleukin 7 receptor
INHBA inhibin, beta A
IRX4 iroquois homeobox 4
ITFG1 integrin alpha FG-GAP repeat containing 1
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
JUN jun proto-oncogene
JUND jun D proto-oncogene
KATNB1 katanin p80 (WD repeat containing) subunit B 1
KDM6B lysine (K)-specific demethylase 6B
KIF14 kinesin family member 14
KIFC3 kinesin family member C3
KIRREL kin of IRRE like (Drosophila)
KLF2 Kruppel-like factor 2
KLF4 Kruppel-like factor 4 (gut)
KLF6 Kruppel-like factor 6
KLHL15 kelch-like family member 15
LIF leukemia inhibitory factor
LILRA2 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2
LINC00235 long intergenic non-protein coding RNA 235
LOC283922 pyruvate dehydrogenase phosphatase regulatory subunit pseudogene
LOC399815 chromosome 10 open reading frame 88 pseudogene
LOC400940 uncharacterized LOC400940
LOC494141 solute carrier family 25, member 51 pseudogene
LPCAT2 lysophosphatidylcholine acyltransferase 2
LRRC70 leucine rich repeat containing 70
LYAR Ly1 antibody reactive
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
MARCH6 membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
MARVELD3 MARVEL domain containing 3
MB21D1 Mab-21 domain containing 1
MBTPS1 membrane-bound transcription factor peptidase, site 1
MCL1 myeloid cell leukemia 1
MEDAG mesenteric estrogen-dependent adipogenesis
MESDC1 mesoderm development candidate 1
MGC45800
MIDN midnolin
MOGS mannosyl-oligosaccharide glucosidase
MON1B MON1 secretory trafficking family member B
MORF4L2 mortality factor 4 like 2
MRPS30 mitochondrial ribosomal protein S30
MS4A6E membrane-spanning 4-domains, subfamily A, member 6E
MT1E metallothionein 1E
MTBP MDM2 binding protein
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MTVR2 mouse mammary tumor virus receptor homolog 2
MYADM myeloid-associated differentiation marker
N4BP1 NEDD4 binding protein 1
NAE1 NEDD8 activating enzyme E1 subunit 1
NCLN nicalin
NEDD9 neural precursor cell expressed, developmentally down-regulated 9
NEFL neurofilament, light polypeptide
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
NHLH2 nescient helix loop helix 2
NIP7 NIP7, nucleolar pre-rRNA processing protein
NLRC5 NLR family, CARD domain containing 5
NLRP12 NLR family, pyrin domain containing 12
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
NPHP3-AS1 NPHP3 antisense RNA 1
NPTN neuroplastin
NR4A1 nuclear receptor subfamily 4, group A, member 1
NR4A3 nuclear receptor subfamily 4, group A, member 3
NRARP NOTCH-regulated ankyrin repeat protein
NRG1 neuregulin 1
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
NUP155 nucleoporin 155kDa
NUP62CL nucleoporin 62kDa C-terminal like
NUP93 nucleoporin 93kDa
OAF OAF homolog (Drosophila)
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OR2B11 olfactory receptor, family 2, subfamily B, member 11
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OR5K2 olfactory receptor, family 5, subfamily K, member 2
OR6T1 olfactory receptor, family 6, subfamily T, member 1
ORC6 origin recognition complex, subunit 6
OSMR oncostatin M receptor
OSR2 odd-skipped related transciption factor 2
OTUD1 OTU deubiquitinase 1
P3H2 prolyl 3-hydroxylase 2
PADI4 peptidyl arginine deiminase, type IV
PAPD5 PAP associated domain containing 5
PAPD7 PAP associated domain containing 7
PCDHB4 protocadherin beta 4
PCSK1 proprotein convertase subtilisin/kexin type 1
PGLYRP1 peptidoglycan recognition protein 1
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2
PHOSPHO1 phosphatase, orphan 1
PI15 peptidase inhibitor 15
PIEZO1 piezo-type mechanosensitive ion channel component 1
PIGZ phosphatidylinositol glycan anchor biosynthesis, class Z
PKMYT1 protein kinase, membrane associated tyrosine/threonine 1
PKN3 protein kinase N3
PLK3 polo-like kinase 3
PLS3 plastin 3
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
POLR3D polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
POU1F1 POU class 1 homeobox 1
PP2D1 protein phosphatase 2C-like domain containing 1
PPP1R15A protein phosphatase 1, regulatory subunit 15A
PPP1R15B protein phosphatase 1, regulatory subunit 15B
PROK1 prokineticin 1
PROK2 prokineticin 2
PSKH1 protein serine kinase H1
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
PTGER4 prostaglandin E receptor 4 (subtype EP4)
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PVALB parvalbumin
QSOX2 quiescin Q6 sulfhydryl oxidase 2
RAP2B RAP2B, member of RAS oncogene family
RASA4 RAS p21 protein activator 4
RASGRP4 RAS guanyl releasing protein 4
RBM12B-AS1 RBM12B antisense RNA 1
RELT RELT tumor necrosis factor receptor
RND3 Rho family GTPase 3
RPE65 retinal pigment epithelium-specific protein 65kDa
RSPRY1 ring finger and SPRY domain containing 1
SARAF store-operated calcium entry-associated regulatory factor
SCARNA21 small Cajal body-specific RNA 21
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SELE selectin E
SELP selectin P (granule membrane protein 140kDa, antigen CD62)
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
SETD6 SET domain containing 6
SF3B3 splicing factor 3b, subunit 3, 130kDa
SHANK3 SH3 and multiple ankyrin repeat domains 3
SHCBP1 SHC SH2-domain binding protein 1
SIAH1 siah E3 ubiquitin protein ligase 1
SIGLECL1 SIGLEC family like 1
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SLC19A1 solute carrier family 19 (folate transporter), member 1
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1
SLC52A2 solute carrier family 52 (riboflavin transporter), member 2
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLC7A5P2 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2
SLC7A6 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
SNAI1 snail family zinc finger 1
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA2B small nucleolar RNA, H/ACA box 2B
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA34 small nucleolar RNA, H/ACA box 34
SNORA4 small nucleolar RNA, H/ACA box 4
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TARS threonyl-tRNA synthetase
TAS2R30 taste receptor, type 2, member 30
TBX20 T-box 20
TCF21 transcription factor 21
TCF23 transcription factor 23
TEPP testis, prostate and placenta expressed
TINAG tubulointerstitial nephritis antigen
TIPARP TCDD-inducible poly(ADP-ribose) polymerase
TM4SF1 transmembrane 4 L six family member 1
TMEM170A transmembrane protein 170A
TMEM200B transmembrane protein 200B
TMEM208 transmembrane protein 208
TMEM244 transmembrane protein 244
TNC tenascin C
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFRSF10C tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFSF9 tumor necrosis factor (ligand) superfamily, member 9
TPPP tubulin polymerization promoting protein
TRIB1 tribbles pseudokinase 1
TRIO trio Rho guanine nucleotide exchange factor
TRIP13 thyroid hormone receptor interactor 13
TSPAN2 tetraspanin 2
TTLL8 tubulin tyrosine ligase-like family member 8
USB1 U6 snRNA biogenesis 1
VEGFC vascular endothelial growth factor C
VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae)
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae)
WDR59 WD repeat domain 59
WFDC8 WAP four-disulfide core domain 8
WRN Werner syndrome, RecQ helicase-like
WWP2 WW domain containing E3 ubiquitin protein ligase 2
ZDHHC9 zinc finger, DHHC-type containing 9
ZNF131 zinc finger protein 131
ZNF23 zinc finger protein 23

low expression

Symbol Name
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1