Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7243-01A-11R-2016-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

338 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7243-01A-11R-2016-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD6 abhydrolase domain containing 6
ACTB actin, beta
ADCK1 aarF domain containing kinase 1
AHNAK2 AHNAK nucleoprotein 2
AK5 adenylate kinase 5
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit
ALK anaplastic lymphoma receptor tyrosine kinase
AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
APCDD1 adenomatosis polyposis coli down-regulated 1
ARHGAP28 Rho GTPase activating protein 28
ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head)
ARMCX1 armadillo repeat containing, X-linked 1
ARMCX6 armadillo repeat containing, X-linked 6
ARSA arylsulfatase A
ATF6B activating transcription factor 6 beta
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide
B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
BEND6 BEN domain containing 6
BGN biglycan
BPHL biphenyl hydrolase-like (serine hydrolase)
BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
BTBD2 BTB (POZ) domain containing 2
C11ORF45 chromosome 11 open reading frame 45
C14ORF1 chromosome 14 open reading frame 1
C14ORF169 chromosome 14 open reading frame 169
C14ORF178 chromosome 14 open reading frame 178
C16ORF58 chromosome 16 open reading frame 58
C16ORF62 chromosome 16 open reading frame 62
C1ORF185 chromosome 1 open reading frame 185
C4ORF45 chromosome 4 open reading frame 45
C6ORF10 chromosome 6 open reading frame 10
C6ORF47 chromosome 6 open reading frame 47
C6ORF62 chromosome 6 open reading frame 62
C7ORF31 chromosome 7 open reading frame 31
C8ORF48 chromosome 8 open reading frame 48
CASKIN2 CASK interacting protein 2
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CCDC3 coiled-coil domain containing 3
CCDC8 coiled-coil domain containing 8
CCDC92 coiled-coil domain containing 92
CCL27 chemokine (C-C motif) ligand 27
CCNJL cyclin J-like
CDH13 cadherin 13
CDH22 cadherin 22, type 2
CDK2AP1 cyclin-dependent kinase 2 associated protein 1
CETN2 centrin, EF-hand protein, 2
CFL1 cofilin 1 (non-muscle)
CHMP1B charged multivesicular body protein 1B
CHMP3 charged multivesicular body protein 3
CHODL-AS1 CHODL antisense RNA 1
CHPF2 chondroitin polymerizing factor 2
CIC capicua transcriptional repressor
CKAP4 cytoskeleton-associated protein 4
CLP1 cleavage and polyadenylation factor I subunit 1
CNOT3 CCR4-NOT transcription complex, subunit 3
COG6 component of oligomeric golgi complex 6
COL4A5 collagen, type IV, alpha 5
COL4A6 collagen, type IV, alpha 6
CORO1B coronin, actin binding protein, 1B
CPNE2 copine II
CRIP2 cysteine-rich protein 2
CSPG4 chondroitin sulfate proteoglycan 4
CTBP1-AS2 CTBP1 antisense RNA 2 (head to head)
CUL7 cullin 7
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1
CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1
DAXX death-domain associated protein
DCTN1 dynactin 1
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
DEGS1 delta(4)-desaturase, sphingolipid 1
DEPDC7 DEP domain containing 7
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta
DPP3 dipeptidyl-peptidase 3
DSP desmoplakin
DST dystonin
DUSP6 dual specificity phosphatase 6
EDNRA endothelin receptor type A
EEF2K eukaryotic elongation factor 2 kinase
EFNB1 ephrin-B1
EHD2 EH-domain containing 2
EHMT2 euchromatic histone-lysine N-methyltransferase 2
EML1 echinoderm microtubule associated protein like 1
EML5 echinoderm microtubule associated protein like 5
ENOX2 ecto-NOX disulfide-thiol exchanger 2
EPHB6 EPH receptor B6
ERF Ets2 repressor factor
ESM1 endothelial cell-specific molecule 1
F2RL2 coagulation factor II (thrombin) receptor-like 2
FAM183B acyloxyacyl hydrolase (neutrophil)
FAM210B family with sequence similarity 210, member B
FAM3A family with sequence similarity 3, member A
FAM57A family with sequence similarity 57, member A
FAM89B family with sequence similarity 89, member B
FBLIM1 filamin binding LIM protein 1
FBXL19 F-box and leucine-rich repeat protein 19
FIZ1 FLT3-interacting zinc finger 1
FKRP fukutin related protein
FLNA filamin A, alpha
FLRT2 fibronectin leucine rich transmembrane protein 2
FLRT3 fibronectin leucine rich transmembrane protein 3
FLVCR1-AS1 FLVCR1 antisense RNA 1 (head to head)
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GALNS galactosamine (N-acetyl)-6-sulfatase
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6
GJA1 gap junction protein, alpha 1, 43kDa
GJA3 gap junction protein, alpha 3, 46kDa
GJB2 gap junction protein, beta 2, 26kDa
GJB6 gap junction protein, beta 6, 30kDa
GLI3 GLI family zinc finger 3
GOLGA5 golgin A5
GPNMB glycoprotein (transmembrane) nmb
GPR153 G protein-coupled receptor 153
GPR68 G protein-coupled receptor 68
GRM4 glutamate receptor, metabotropic 4
GUSBP4 glucuronidase, beta pseudogene 4
HCG11 HLA complex group 11 (non-protein coding)
HDAC8 histone deacetylase 8
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H')
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2
HOXC11 homeobox C11
HOXC5 homeobox C5
HS6ST1 heparan sulfate 6-O-sulfotransferase 1
HSPA12A heat shock 70kDa protein 12A
HSPA13 heat shock protein 70kDa family, member 13
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2
ITGB5 integrin, beta 5
ITGB6 integrin, beta 6
JAG1 jagged 1
JAG2 jagged 2
JDP2 Jun dimerization protein 2
KANK4 KN motif and ankyrin repeat domains 4
KCNJ5 potassium channel, inwardly rectifying subfamily J, member 5
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
KIAA1210 KIAA1210
KIAA1644 KIAA1644
KIR3DP1 killer cell immunoglobulin-like receptor, three domains, pseudogene 1
KRT14 keratin 14, type I
KRT5 keratin 5, type II
LAMP2 lysosomal-associated membrane protein 2
LAMP5 lysosomal-associated membrane protein family, member 5
LECT2 leukocyte cell-derived chemotaxin 2
LINC00652 long intergenic non-protein coding RNA 652
LMO1 LIM domain only 1 (rhombotin 1)
LOC285629 uncharacterized LOC285629
LPAR5 lysophosphatidic acid receptor 5
LPXN leupaxin
LRP5 low density lipoprotein receptor-related protein 5
LTBP1 latent transforming growth factor beta binding protein 1
LYST lysosomal trafficking regulator
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAGEE1 melanoma antigen family E1
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MARK4 MAP/microtubule affinity-regulating kinase 4
MBTPS1 membrane-bound transcription factor peptidase, site 1
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MED12 mediator complex subunit 12
MED20 mediator complex subunit 20
METAP2 methionyl aminopeptidase 2
MFAP2 microfibrillar-associated protein 2
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MMP1 matrix metallopeptidase 1
MORF4L2 mortality factor 4 like 2
MOSPD1 motile sperm domain containing 1
MPPE1 metallophosphoesterase 1
MPV17 MpV17 mitochondrial inner membrane protein
MSN moesin
MTCL1 microtubule crosslinking factor 1
MTSS1L metastasis suppressor 1-like
MYO7B myosin VIIB
NAP1L2 nucleosome assembly protein 1-like 2
NCK2 NCK adaptor protein 2
NCKAP5 NCK-associated protein 5
NCKAP5L NCK-associated protein 5-like
NELL2 NEL-like 2 (chicken)
NFIB nuclear factor I/B
NFYA nuclear transcription factor Y, alpha
NINJ2 ninjurin 2
NKAP NFKB activating protein
NKPD1 NTPase, KAP family P-loop domain containing 1
NONO non-POU domain containing, octamer-binding
NRIP1 nuclear receptor interacting protein 1
NSFL1C NSFL1 (p97) cofactor (p47)
NUAK1 NUAK family, SNF1-like kinase, 1
OLFM2 olfactomedin 2
OPN3 opsin 3
OR10Q1 olfactory receptor, family 10, subfamily Q, member 1
PBX2 pre-B-cell leukemia homeobox 2
PCBP1 poly(rC) binding protein 1
PCDHA4 protocadherin alpha 4
PCDHB16 protocadherin beta 16
PCIF1 PDX1 C-terminal inhibiting factor 1
PDGFA platelet-derived growth factor alpha polypeptide
PDIA6 protein disulfide isomerase family A, member 6
PGBD1 piggyBac transposable element derived 1
PGRMC1 progesterone receptor membrane component 1
PHLDB1 pleckstrin homology-like domain, family B, member 1
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
PLAG1 pleiomorphic adenoma gene 1
PLBD2 phospholipase B domain containing 2
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific)
PLSCR5 phospholipid scramblase family, member 5
PPP1R10 protein phosphatase 1, regulatory subunit 10
PPP1R11 protein phosphatase 1, regulatory (inhibitor) subunit 11
PPP1R18 protein phosphatase 1, regulatory subunit 18
PPP2R1A protein phosphatase 2, regulatory subunit A, alpha
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PRRC2A proline-rich coiled-coil 2A
PRSS16 protease, serine, 16 (thymus)
PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
PUS10 pseudouridylate synthase 10
PXDC1 PX domain containing 1
RAB40C RAB40C, member RAS oncogene family
RAP2B RAP2B, member of RAS oncogene family
RARA retinoic acid receptor, alpha
RBM45 RNA binding motif protein 45
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
RGL2 ral guanine nucleotide dissociation stimulator-like 2
RHOB ras homolog family member B
RING1 ring finger protein 1
RNF122 ring finger protein 122
RNF128 ring finger protein 128, E3 ubiquitin protein ligase
RXRB retinoid X receptor, beta
SAYSD1 SAYSVFN motif domain containing 1
SDK2 sidekick cell adhesion molecule 2
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
SFRP2 secreted frizzled-related protein 2
SH3BGRL SH3 domain binding glutamate-rich protein like
SIAH1 siah E3 ubiquitin protein ligase 1
SIRPA signal-regulatory protein alpha
SIX5 SIX homeobox 5
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae)
SLC10A3 solute carrier family 10, member 3
SLC22A18AS solute carrier family 22 (organic cation transporter), member 18 antisense
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1
SLC2A4RG SLC2A4 regulator
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
SLC35F6 solute carrier family 35, member F6
SLC39A7 solute carrier family 39 (zinc transporter), member 7
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2
SLC7A8 solute carrier family 7 (amino acid transporter light chain, L system), member 8
SLITRK6 SLIT and NTRK-like family, member 6
SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
SNAI2 snail family zinc finger 2
SNORA14B small nucleolar RNA, H/ACA box 14B
SNORA79 small nucleolar RNA, H/ACA box 79
SNPH syntaphilin
SOX4 SRY (sex determining region Y)-box 4
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1
SPON2 spondin 2, extracellular matrix protein
SPPL3 signal peptide peptidase like 3
SPTLC3 serine palmitoyltransferase, long chain base subunit 3
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SRSF8 serine/arginine-rich splicing factor 8
STAG2 stromal antigen 2
STK32A serine/threonine kinase 32A
STON2 stonin 2
SULF2 sulfatase 2
SYT7 synaptotagmin VII
TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3
TBC1D8B TBC1 domain family, member 8B (with GRAM domain)
TBCK TBC1 domain containing kinase
TEAD2 TEA domain family member 2
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
TFCP2 transcription factor CP2
TGFBI transforming growth factor, beta-induced, 68kDa
TGIF1 TGFB-induced factor homeobox 1
THNSL2 threonine synthase-like 2 (S. cerevisiae)
THOC6 THO complex 6
TLDC1 TBC/LysM-associated domain containing 1
TLL1 tolloid-like 1
TMCC2 transmembrane and coiled-coil domain family 2
TMED10 transmembrane emp24-like trafficking protein 10 (yeast)
TMED10P1 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1
TMEM105 transmembrane protein 105
TMEM185A transmembrane protein 185A
TMEM214 transmembrane protein 214
TMEM216 transmembrane protein 216
TMEM63B transmembrane protein 63B
TMEM64 transmembrane protein 64
TMEM8A transmembrane protein 8A
TNFRSF21 tumor necrosis factor receptor superfamily, member 21
TNKS1BP1 tankyrase 1 binding protein 1, 182kDa
TRIM26 tripartite motif containing 26
TRIP11 thyroid hormone receptor interactor 11
TSHZ3 teashirt zinc finger homeobox 3
TSLP thymic stromal lymphopoietin
TTC8 tetratricopeptide repeat domain 8
TTTY15 testis-specific transcript, Y-linked 15 (non-protein coding)
TTYH3 tweety family member 3
TUBB3 tubulin, beta 3 class III
TWSG1 twisted gastrulation BMP signaling modulator 1
TXLNGY taxilin gamma pseudogene, Y-linked
U2AF2 U2 small nuclear RNA auxiliary factor 2
ULK1 unc-51 like autophagy activating kinase 1
ULK2 unc-51 like autophagy activating kinase 2
USB1 U6 snRNA biogenesis 1
USP25 ubiquitin specific peptidase 25
VANGL2 VANGL planar cell polarity protein 2
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VASP vasodilator-stimulated phosphoprotein
VIPR1 vasoactive intestinal peptide receptor 1
VPS37C vacuolar protein sorting 37 homolog C (S. cerevisiae)
VPS52 vacuolar protein sorting 52 homolog (S. cerevisiae)
VSIG1 V-set and immunoglobulin domain containing 1
WASF3 WAS protein family, member 3
WNT5B wingless-type MMTV integration site family, member 5B
YIPF2 Yip1 domain family, member 2
YIPF3 Yip1 domain family, member 3
YY1 YY1 transcription factor
ZBED9 zinc finger, BED-type containing 9
ZBTB22 zinc finger and BTB domain containing 22
ZBTB45 zinc finger and BTB domain containing 45
ZBTB9 zinc finger and BTB domain containing 9
ZC3H4 zinc finger CCCH-type containing 4
ZC4H2 zinc finger, C4H2 domain containing
ZDHHC5 zinc finger, DHHC-type containing 5
ZDHHC9 zinc finger, DHHC-type containing 9
ZFAND3 zinc finger, AN1-type domain 3
ZFY zinc finger protein, Y-linked
ZKSCAN3 zinc finger with KRAB and SCAN domains 3
ZNF213 zinc finger protein 213
ZNF311 zinc finger protein 311
ZNF319 zinc finger protein 319
ZNF480 zinc finger protein 480
ZNF574 zinc finger protein 574
ZNF71 zinc finger protein 71
ZNF720 zinc finger protein 720
ZNF765 zinc finger protein 765
ZNF815P zinc finger protein 815, pseudogene
ZNRF2 zinc and ring finger 2, E3 ubiquitin protein ligase
ZSCAN26 zinc finger and SCAN domain containing 26
ZSCAN9 zinc finger and SCAN domain containing 9

low expression

Symbol Name
NDUFV3 NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa
RAB14 RAB14, member RAS oncogene family
REV1 REV1, polymerase (DNA directed)
ZFYVE27 zinc finger, FYVE domain containing 27