Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6941-01A-11R-1915-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

393 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6941-01A-11R-1915-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A4GALT alpha 1,4-galactosyltransferase
AASS aminoadipate-semialdehyde synthase
AATK apoptosis-associated tyrosine kinase
ABHD15 abhydrolase domain containing 15
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain
ACR acrosin
ACTL9 actin-like 9
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary)
ADD3 adducin 3 (gamma)
AEBP2 AE binding protein 2
AFF2 AF4/FMR2 family, member 2
AGO1 argonaute RISC catalytic component 1
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5
AHDC1 AT hook, DNA binding motif, containing 1
AIPL1 aryl hydrocarbon receptor interacting protein-like 1
AKR1C2 aldo-keto reductase family 1, member C2
AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1
ALDH3A2 aldehyde dehydrogenase 3 family, member A2
ALKBH5 AlkB family member 5, RNA demethylase
ALOX12P2 arachidonate 12-lipoxygenase pseudogene 2
ALS2CR11 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11
ANKLE1 ankyrin repeat and LEM domain containing 1
ANKRD13B ankyrin repeat domain 13B
ANKRD50 ankyrin repeat domain 50
AP1B1 adaptor-related protein complex 1, beta 1 subunit
APC adenomatous polyposis coli
ARHGAP28 Rho GTPase activating protein 28
ARL13B ADP-ribosylation factor-like 13B
ASCC2 activating signal cointegrator 1 complex subunit 2
ASPDH aspartate dehydrogenase domain containing
ASPHD1 aspartate beta-hydroxylase domain containing 1
ASTL astacin-like metallo-endopeptidase (M12 family)
ATAD2B ATPase family, AAA domain containing 2B
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1
ATP6V1E2 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2
ATP7A ATPase, Cu++ transporting, alpha polypeptide
ATP8B3 ATPase, aminophospholipid transporter, class I, type 8B, member 3
ATXN2L ataxin 2-like
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3
BAHCC1 BAH domain and coiled-coil containing 1
BAZ1B bromodomain adjacent to zinc finger domain, 1B
BCKDK branched chain ketoacid dehydrogenase kinase
BCO2 beta-carotene oxygenase 2
BDNF brain-derived neurotrophic factor
BLK BLK proto-oncogene, Src family tyrosine kinase
BRD1 bromodomain containing 1
BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3
C10ORF91 chromosome 10 open reading frame 91
C17ORF100 chromosome 17 open reading frame 100
C17ORF85 chromosome 17 open reading frame 85
C1QTNF8 C1q and tumor necrosis factor related protein 8
C2ORF27B chromosome 2 open reading frame 27B
C8ORF74 chromosome 8 open reading frame 74
C9ORF173 chromosome 9 open reading frame 173
CACNA1I calcium channel, voltage-dependent, T type, alpha 1I subunit
CALML5 calmodulin-like 5
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family)
CASKIN1 CASK interacting protein 1
CATSPER2P1 cation channel, sperm associated 2 pseudogene 1
CBLN3 cerebellin 3 precursor
CCDC136 coiled-coil domain containing 136
CCDC144A coiled-coil domain containing 144A
CCND2 cyclin D2
CCR10 chemokine (C-C motif) receptor 10
CD2BP2 CD2 (cytoplasmic tail) binding protein 2
CDH12 cadherin 12, type 2 (N-cadherin 2)
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35)
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3
CEP170P1 centrosomal protein 170kDa pseudogene 1
CER1 cerberus 1, DAN family BMP antagonist
CERK ceramide kinase
CHAT choline O-acetyltransferase
CHD4 chromodomain helicase DNA binding protein 4
CLDN25 claudin 25
CNTNAP1 contactin associated protein 1
CPED1 cadherin-like and PC-esterase domain containing 1
CPOX coproporphyrinogen oxidase
CREBBP CREB binding protein
CRHR1-IT1 CRHR1 intronic transcript 1
CT83 cancer/testis antigen 83
CTC1 CTS telomere maintenance complex component 1
CTCFL CCCTC-binding factor (zinc finger protein)-like
CTF1 cardiotrophin 1
CXADR coxsackie virus and adenovirus receptor
CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2
CXORF57 chromosome X open reading frame 57
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1
CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1
CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2
CYTH3 cytohesin 3
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DDHD1 DDHD domain containing 1
DEGS2 delta(4)-desaturase, sphingolipid 2
DHX33 DEAH (Asp-Glu-Ala-His) box polypeptide 33
DISC1 disrupted in schizophrenia 1
DLG4 discs, large homolog 4 (Drosophila)
DNAH2 dynein, axonemal, heavy chain 2
DNASE1L2 deoxyribonuclease I-like 2
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DOC2A double C2-like domains, alpha
DPPA4 developmental pluripotency associated 4
DPPA5 developmental pluripotency associated 5
DPRXP4 divergent-paired related homeobox pseudogene 4
DUXA double homeobox A
DVL2 dishevelled segment polarity protein 2
EDIL3 EGF-like repeats and discoidin I-like domains 3
EFCAB3 EF-hand calcium binding domain 3
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
EIF3C eukaryotic translation initiation factor 3, subunit C
EIF3CL eukaryotic translation initiation factor 3, subunit C-like
EMILIN3 elastin microfibril interfacer 3
EPN2 epsin 2
EPO erythropoietin
ESR2 estrogen receptor 2 (ER beta)
EVPLL envoplakin-like
EWSR1 EWS RNA-binding protein 1
FAM186B family with sequence similarity 186, member B
FAM208B family with sequence similarity 208, member B
FAM222A family with sequence similarity 222, member A
FAM47A family with sequence similarity 47, member A
FAM69C family with sequence similarity 69, member C
FAM71E2 family with sequence similarity 71, member E2
FAM83D family with sequence similarity 83, member D
FAM92A1P2 family with sequence similarity 92, member A3
FBRS fibrosin
FBXL19 F-box and leucine-rich repeat protein 19
FBXO17 F-box protein 17
FBXO18 F-box protein, helicase, 18
FGF22 fibroblast growth factor 22
FKBP10 FK506 binding protein 10, 65 kDa
FLJ34503 uncharacterized FLJ34503
FOXH1 forkhead box H1
FSCN2 fascin actin-bundling protein 2, retinal
GALNT9 polypeptide N-acetylgalactosaminyltransferase 9
GALP galanin-like peptide
GALR3 galanin receptor 3
GAS2L1 growth arrest-specific 2 like 1
GATA1 GATA binding protein 1 (globin transcription factor 1)
GATA4 GATA binding protein 4
GCC1 GRIP and coiled-coil domain containing 1
GOLIM4 golgi integral membrane protein 4
GPR37L1 G protein-coupled receptor 37 like 1
GRIK2 glutamate receptor, ionotropic, kainate 2
GRXCR2 glutaredoxin, cysteine rich 2
GSTA3 glutathione S-transferase alpha 3
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa
GTSE1-AS1 GTSE1 antisense RNA 1 (head to head)
GUCA2A guanylate cyclase activator 2A (guanylin)
GUCA2B guanylate cyclase activator 2B (uroguanylin)
H1FOO H1 histone family, member O, oocyte-specific
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HEATR4 HEAT repeat containing 4
HHLA1 HERV-H LTR-associating 1
HILPDA hypoxia inducible lipid droplet-associated
HIP1 huntingtin interacting protein 1
HIRIP3 HIRA interacting protein 3
HIST3H3 histone cluster 3, H3
HLA-G major histocompatibility complex, class I, G
HOXD8 homeobox D8
HS3ST6 heparan sulfate (glucosamine) 3-O-sulfotransferase 6
HSP90B3P heat shock protein 90kDa beta (Grp94), member 3, pseudogene
HTR1B 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled
HTR3D 5-hydroxytryptamine (serotonin) receptor 3D, ionotropic
IFT140 intraflagellar transport 140
IL23R interleukin 23 receptor
IL36B interleukin 36, beta
INTS2 integrator complex subunit 2
INTS4P2 integrator complex subunit 4 pseudogene 2
IRF5 interferon regulatory factor 5
ITPKA inositol-trisphosphate 3-kinase A
KANSL1 KAT8 regulatory NSL complex subunit 1
KAT2A K(lysine) acetyltransferase 2A
KAT8 K(lysine) acetyltransferase 8
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1
KCP kielin/chordin-like protein
KCTD16 potassium channel tetramerization domain containing 16
KDM5A lysine (K)-specific demethylase 5A
KIAA0319 KIAA0319
KIAA1671 KIAA1671
KIF3C kinesin family member 3C
KIR3DL3 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3
KISS1R KISS1 receptor
KLHL13 kelch-like family member 13
KLHL29 kelch-like family member 29
KREMEN1 kringle containing transmembrane protein 1
KRTCAP3 keratinocyte associated protein 3
LARP4B La ribonucleoprotein domain family, member 4B
LENEP lens epithelial protein
LGALS4 lectin, galactoside-binding, soluble, 4
LINC00482 long intergenic non-protein coding RNA 482
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LOC100190986 uncharacterized LOC100190986
LOC143666 uncharacterized LOC143666
LOC340074 uncharacterized LOC340074
LOC613037 nuclear pore complex interacting protein pseudogene
LOC643486
LOC646813 DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene
LRIT1 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
LRRC37A leucine rich repeat containing 37A
LRRC4 leucine rich repeat containing 4
MAZ MYC-associated zinc finger protein (purine-binding transcription factor)
MED29 mediator complex subunit 29
MFHAS1 malignant fibrous histiocytoma amplified sequence 1
MGC27382 uncharacterized MGC27382
MGC57346 ADP-ribosylation factor pseudogene
MKL2 MKL/myocardin-like 2
MKLN1 muskelin 1, intracellular mediator containing kelch motifs
MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1
MPI mannose phosphate isomerase
MS4A2 membrane-spanning 4-domains, subfamily A, member 2
MTMR3 myotubularin related protein 3
MUC17 mucin 17, cell surface associated
MYBBP1A MYB binding protein (P160) 1a
MYBPC3 myosin binding protein C, cardiac
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
MYT1 myelin transcription factor 1
NCAN neurocan
NCKAP1 NCK-associated protein 1
NEK8 NIMA-related kinase 8
NF2 neurofibromin 2 (merlin)
NFATC2IP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
NFE2L2 nuclear factor, erythroid 2-like 2
NFRKB nuclear factor related to kappaB binding protein
NIPSNAP1 nipsnap homolog 1 (C. elegans)
NLRX1 NLR family member X1
NOS3 nitric oxide synthase 3 (endothelial cell)
NPBWR2 neuropeptides B/W receptor 2
NPC1 Niemann-Pick disease, type C1
NPR1 natriuretic peptide receptor 1
NR5A1 nuclear receptor subfamily 5, group A, member 1
NRCAM neuronal cell adhesion molecule
NTS neurotensin
NXNL1 nucleoredoxin-like 1
NYAP1 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1
ODC1 ornithine decarboxylase 1
ONECUT1 one cut homeobox 1
ONECUT3 one cut homeobox 3
OPN1LW opsin 1 (cone pigments), long-wave-sensitive
OR10J1 olfactory receptor, family 10, subfamily J, member 1
OR1F1 olfactory receptor, family 1, subfamily F, member 1
OR1L4 olfactory receptor, family 1, subfamily L, member 4
OR2A2 olfactory receptor, family 2, subfamily A, member 2
OR52K2 olfactory receptor, family 52, subfamily K, member 2
OR8B2 olfactory receptor, family 8, subfamily B, member 2
OR8S1 olfactory receptor, family 8, subfamily S, member 1
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
P3H4 prolyl 3-hydroxylase family member 4 (non-enzymatic)
PAGE2 P antigen family, member 2 (prostate associated)
PAK4 p21 protein (Cdc42/Rac)-activated kinase 4
PALM paralemmin
PAPOLG poly(A) polymerase gamma
PAX3 paired box 3
PCDH19 protocadherin 19
PCSK9 proprotein convertase subtilisin/kexin type 9
PGLYRP2 peptidoglycan recognition protein 2
PHACTR3 phosphatase and actin regulator 3
PHTF2 putative homeodomain transcription factor 2
PIWIL2 piwi-like RNA-mediated gene silencing 2
PLAG1 pleiomorphic adenoma gene 1
PLB1 phospholipase B1
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2
PNCK pregnancy up-regulated nonubiquitous CaM kinase
PNPT1 polyribonucleotide nucleotidyltransferase 1
POLR1A polymerase (RNA) I polypeptide A, 194kDa
POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J2
POTEE POTE ankyrin domain family, member E
POTEF POTE ankyrin domain family, member F
POU1F1 POU class 1 homeobox 1
PPP1R3D protein phosphatase 1, regulatory subunit 3D
PPP1R3G protein phosphatase 1, regulatory subunit 3G
PRDM13 PR domain containing 13
PRM3 protamine 3
PRPF8 pre-mRNA processing factor 8
PRPH peripherin
PRSS36 protease, serine, 36
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1
PUS7 pseudouridylate synthase 7 (putative)
PYY2 peptide YY, 2 (pseudogene)
R3HDM1 R3H domain containing 1
RAB3B RAB3B, member RAS oncogene family
RAB40B RAB40B, member RAS oncogene family
RAB40C RAB40C, member RAS oncogene family
RABEP1 rabaptin, RAB GTPase binding effector protein 1
RABGGTB Rab geranylgeranyltransferase, beta subunit
RAI1 retinoic acid induced 1
RASSF9 Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
RAX2 retina and anterior neural fold homeobox 2
RBM28 RNA binding motif protein 28
RBM41 RNA binding motif protein 41
RBMY1A3P RNA binding motif protein, Y-linked, family 1, member A3 pseudogene
RCC1 regulator of chromosome condensation 1
RCOR2 REST corepressor 2
RD3 retinal degeneration 3
RFPL1 ret finger protein-like 1
RGMA repulsive guidance molecule family member a
RGS17 regulator of G-protein signaling 17
RHBDD3 rhomboid domain containing 3
RHOBTB3 Rho-related BTB domain containing 3
RNF144A ring finger protein 144A
RNF215 ring finger protein 215
RNF40 ring finger protein 40, E3 ubiquitin protein ligase
ROBO3 roundabout, axon guidance receptor, homolog 3 (Drosophila)
RPL23AP53 ribosomal protein L23a pseudogene 53
RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6
RSBN1L round spermatid basic protein 1-like
RTN4RL2 reticulon 4 receptor-like 2
SAMD4B sterile alpha motif domain containing 4B
SARS2 seryl-tRNA synthetase 2, mitochondrial
SELO selenoprotein O
SEMA4F sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F
SEMG1 semenogelin I
SETD1A SET domain containing 1A
SF3A1 splicing factor 3a, subunit 1, 120kDa
SHANK3 SH3 and multiple ankyrin repeat domains 3
SHOX2 short stature homeobox 2
SIPA1L3 signal-induced proliferation-associated 1 like 3
SLC13A4 solute carrier family 13 (sodium/sulfate symporter), member 4
SLC29A4 solute carrier family 29 (equilibrative nucleoside transporter), member 4
SLC38A8 solute carrier family 38, member 8
SLC47A1 solute carrier family 47 (multidrug and toxin extrusion), member 1
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8
SMCP sperm mitochondria-associated cysteine-rich protein
SMG6 SMG6 nonsense mediated mRNA decay factor
SNORA72 small nucleolar RNA, H/ACA box 72
SPATA31A1 SPATA31 subfamily A, member 1
SPATA31A3 SPATA31 subfamily A, member 3
SPDYC speedy/RINGO cell cycle regulator family member C
SPDYE2 speedy/RINGO cell cycle regulator family member E2
SRCAP Snf2-related CREBBP activator protein
SRRM3 serine/arginine repetitive matrix 3
SSFA2 sperm specific antigen 2
STK32B serine/threonine kinase 32B
STPG1 sperm-tail PG-rich repeat containing 1
SULT1E1 sulfotransferase family 1E, estrogen-preferring, member 1
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
SUPT20HL2 suppressor of Ty 20 homolog (S. cerevisiae)-like 2
SYCE3 synaptonemal complex central element protein 3
TAAR8 trace amine associated receptor 8
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TAL1 T-cell acute lymphocytic leukemia 1
TAOK2 TAO kinase 2
TBC1D10A TBC1 domain family, member 10A
TBC1D10B TBC1 domain family, member 10B
TBC1D28 TBC1 domain family, member 28
TBL1X transducin (beta)-like 1X-linked
TBX6 T-box 6
TFAP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)
THOC5 THO complex 5
THSD7B thrombospondin, type I, domain containing 7B
TNFRSF18 tumor necrosis factor receptor superfamily, member 18
TNNI3 troponin I type 3 (cardiac)
TPBG trophoblast glycoprotein
TPPP tubulin polymerization promoting protein
TRIT1 tRNA isopentenyltransferase 1
TRPS1 trichorhinophalangeal syndrome I
TRPV4 transient receptor potential cation channel, subfamily V, member 4
TSPAN18 tetraspanin 18
TTLL12 tubulin tyrosine ligase-like family member 12
TUBAL3 tubulin, alpha-like 3
TUFM Tu translation elongation factor, mitochondrial
TULP3 tubby like protein 3
UBE2H ubiquitin-conjugating enzyme E2H
UBE2O ubiquitin-conjugating enzyme E2O
UGT1A7 UDP glucuronosyltransferase 1 family, polypeptide A7
ULK2 unc-51 like autophagy activating kinase 2
UROC1 urocanate hydratase 1
USP42 ubiquitin specific peptidase 42
VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1
VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae)
WASL Wiskott-Aldrich syndrome-like
WDR45B WD repeat domain 45B
ZAN zonadhesin (gene/pseudogene)
ZBED4 zinc finger, BED-type containing 4
ZFP30 ZFP30 zinc finger protein
ZNF174 zinc finger protein 174
ZNF273 zinc finger protein 273
ZNF318 zinc finger protein 318
ZNF573 zinc finger protein 573
ZNF607 zinc finger protein 607
ZNF609 zinc finger protein 609
ZNF646 zinc finger protein 646
ZNF652 zinc finger protein 652
ZNF679 zinc finger protein 679
ZNF689 zinc finger protein 689
ZNF764 zinc finger protein 764
ZRANB3 zinc finger, RAN-binding domain containing 3

low expression

Symbol Name
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1
RAB4A RAB4A, member RAS oncogene family