Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5444-01A-02R-1514-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

429 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5444-01A-02R-1514-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6
ABCB8 ATP-binding cassette, sub-family B (MDR/TAP), member 8
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACTN3 actinin, alpha 3 (gene/pseudogene)
ADAM22 ADAM metallopeptidase domain 22
ADAMDEC1 ADAM-like, decysin 1
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12
ADAMTSL2 ADAMTS-like 2
ADAR adenosine deaminase, RNA-specific
AEBP1 AE binding protein 1
ALG2 ALG2, alpha-1,3/1,6-mannosyltransferase
ALMS1P Alstrom syndrome 1 pseudogene
ALPL alkaline phosphatase, liver/bone/kidney
AMPH amphiphysin
ANAPC13 anaphase promoting complex subunit 13
ANAPC2 anaphase promoting complex subunit 2
ANOS1 anosmin 1
ANTXR1 anthrax toxin receptor 1
APLNR apelin receptor
AQP10 aquaporin 10
ARF4 ADP-ribosylation factor 4
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ARL15 ADP-ribosylation factor-like 15
ARMC9 armadillo repeat containing 9
ARSE arylsulfatase E (chondrodysplasia punctata 1)
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ASB6 ankyrin repeat and SOCS box containing 6
ASIC2 acid sensing (proton gated) ion channel 2
ATP10A ATPase, class V, type 10A
BACE1 beta-site APP-cleaving enzyme 1
BCO2 beta-carotene oxygenase 2
BDKRB2 bradykinin receptor B2
BNC2 basonuclin 2
BTN3A1 butyrophilin, subfamily 3, member A1
BTN3A2 butyrophilin, subfamily 3, member A2
BTN3A3 butyrophilin, subfamily 3, member A3
C14ORF37 chromosome 14 open reading frame 37
C16ORF58 chromosome 16 open reading frame 58
C1QB complement component 1, q subcomponent, B chain
C1QC complement component 1, q subcomponent, C chain
C2 complement component 2
C5ORF47 chromosome 5 open reading frame 47
C9ORF153 chromosome 9 open reading frame 153
C9ORF43 chromosome 9 open reading frame 43
C9ORF69 chromosome 9 open reading frame 69
C9ORF89 chromosome 9 open reading frame 89
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CADM3 cell adhesion molecule 3
CALHM2 calcium homeostasis modulator 2
CASQ2 calsequestrin 2 (cardiac muscle)
CCDC36 coiled-coil domain containing 36
CCIN calicin
CD80 CD80 molecule
CDC26 cell division cycle 26
CDK15 cyclin-dependent kinase 15
CDK9 cyclin-dependent kinase 9
CGGBP1 CGG triplet repeat binding protein 1
CHPF2 chondroitin polymerizing factor 2
CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle)
CHRNB3 cholinergic receptor, nicotinic, beta 3 (neuronal)
CHRND cholinergic receptor, nicotinic, delta (muscle)
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CIZ1 CDKN1A interacting zinc finger protein 1
CLEC11A C-type lectin domain family 11, member A
CLIP2 CAP-GLY domain containing linker protein 2
CNTN4 contactin 4
COL10A1 collagen, type X, alpha 1
COL11A1 collagen, type XI, alpha 1
COL16A1 collagen, type XVI, alpha 1
COL18A1 collagen, type XVIII, alpha 1
COL1A2 collagen, type I, alpha 2
COL24A1 collagen, type XXIV, alpha 1
COL3A1 collagen, type III, alpha 1
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)
COL5A1 collagen, type V, alpha 1
COL6A1 collagen, type VI, alpha 1
COL6A2 collagen, type VI, alpha 2
COL8A1 collagen, type VIII, alpha 1
COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
COMP cartilage oligomeric matrix protein
COPG1 coatomer protein complex, subunit gamma 1
CPNE9 copine family member IX
CRISPLD2 cysteine-rich secretory protein LCCL domain containing 2
CROT carnitine O-octanoyltransferase
CRYBB1 crystallin, beta B1
CSF1R colony stimulating factor 1 receptor
CTHRC1 collagen triple helix repeat containing 1
CTSA cathepsin A
CTSK cathepsin K
CUX1 cut-like homeobox 1
CXCL13 chemokine (C-X-C motif) ligand 13
CXCR2P1 chemokine (C-X-C motif) receptor 2 pseudogene 1
CXXC5 CXXC finger protein 5
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1
CYS1 cystin 1
DAAM2 dishevelled associated activator of morphogenesis 2
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
DAB2IP DAB2 interacting protein
DACT1 dishevelled-binding antagonist of beta-catenin 1
DAGLB diacylglycerol lipase, beta
DCHS1 dachsous cadherin-related 1
DDIT4L DNA-damage-inducible transcript 4-like
DDR2 discoidin domain receptor tyrosine kinase 2
DDX31 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31
DEGS1 delta(4)-desaturase, sphingolipid 1
DFNB31 deafness, autosomal recessive 31
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNASE1L1 deoxyribonuclease I-like 1
DOLK dolichol kinase
DOLPP1 dolichyldiphosphatase 1
DTX1 deltex 1, E3 ubiquitin ligase
EDA2R ectodysplasin A2 receptor
EDNRA endothelin receptor type A
ELAVL4 ELAV like neuron-specific RNA binding protein 4
ELMO2 engulfment and cell motility 2
EMX2OS EMX2 opposite strand/antisense RNA
ENPEP glutamyl aminopeptidase (aminopeptidase A)
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2
ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1
ERCC6L2 excision repair cross-complementation group 6-like 2
EVC Ellis van Creveld protein
EVI5L ecotropic viral integration site 5-like
EYA4 EYA transcriptional coactivator and phosphatase 4
FAM105A family with sequence similarity 105, member A
FAM138F family with sequence similarity 138, member F
FAM155A family with sequence similarity 155, member A
FAM196B family with sequence similarity 196, member B
FAM198B family with sequence similarity 198, member B
FAM58BP cyclin-related protein FAM58B
FBLN2 fibulin 2
FBLN5 fibulin 5
FBN1 fibrillin 1
FBXL7 F-box and leucine-rich repeat protein 7
FBXO39 F-box protein 39
FBXW2 F-box and WD repeat domain containing 2
FKBP15 FK506 binding protein 15, 133kDa
FLJ25758 MAP/microtubule affinity-regulating kinase 1 pseudogene
FNDC1 fibronectin type III domain containing 1
FTX FTX transcript, XIST regulator (non-protein coding)
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1
GAL3ST4 galactose-3-O-sulfotransferase 4
GALNT10 polypeptide N-acetylgalactosaminyltransferase 10
GALNT15 polypeptide N-acetylgalactosaminyltransferase 15
GBP3 guanylate binding protein 3
GFPT2 glutamine-fructose-6-phosphate transaminase 2
GGT5 gamma-glutamyltransferase 5
GIF gastric intrinsic factor (vitamin B synthesis)
GLI3 GLI family zinc finger 3
GLIS3 GLIS family zinc finger 3
GLT8D2 glycosyltransferase 8 domain containing 2
GNLY granulysin
GOLGA1 golgin A1
GOLGA2 golgin A2
GP5 glycoprotein V (platelet)
GPR107 G protein-coupled receptor 107
GPR173 G protein-coupled receptor 173
GPX5 glutathione peroxidase 5
GRID1 glutamate receptor, ionotropic, delta 1
GRP gastrin-releasing peptide
GXYLT2 glucoside xylosyltransferase 2
HAR1A highly accelerated region 1A (non-protein coding)
HAR1B highly accelerated region 1B (non-protein coding)
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HEPH hephaestin
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HEYL hes-related family bHLH transcription factor with YRPW motif-like
HIST1H1T histone cluster 1, H1t
HIST1H2BC histone cluster 1, H2bc
HIST1H4H histone cluster 1, H4h
HIST2H2BA histone cluster 2, H2ba (pseudogene)
HIST2H2BF histone cluster 2, H2bf
HIST2H3C histone cluster 2, H3c
HIST2H3D histone cluster 2, H3d
HIST2H4A histone cluster 2, H4a
HIST3H2BB histone cluster 3, H2bb
HIST3H3 histone cluster 3, H3
HLA-L major histocompatibility complex, class I, L (pseudogene)
HMCN1 hemicentin 1
HSFX2 heat shock transcription factor family, X linked 2
HTRA1 HtrA serine peptidase 1
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
IFI44L interferon-induced protein 44-like
IFIT2 interferon-induced protein with tetratricopeptide repeats 2
IGSF21 immunoglobin superfamily, member 21
INVS inversin
IRF9 interferon regulatory factor 9
ITGA10 integrin, alpha 10
ITGA11 integrin, alpha 11
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains)
JAG2 jagged 2
KANK2 KN motif and ankyrin repeat domains 2
KANK4 KN motif and ankyrin repeat domains 4
KCTD16 potassium channel tetramerization domain containing 16
KIAA0087 KIAA0087
KIAA1462 KIAA1462
KIAA1755 KIAA1755
KIF26B kinesin family member 26B
KIFAP3 kinesin-associated protein 3
LAMA4 laminin, alpha 4
LAMB2 laminin, beta 2 (laminin S)
LAMP5 lysosomal-associated membrane protein family, member 5
LHFP lipoma HMGIC fusion partner
LINC00476 long intergenic non-protein coding RNA 476
LINC00574 long intergenic non-protein coding RNA 574
LOC100129034 uncharacterized LOC100129034
LOC100130264 uncharacterized LOC100130264
LOC152225 uncharacterized LOC152225
LOC285629 uncharacterized LOC285629
LOC441204 uncharacterized LOC441204
LOC90246 uncharacterized LOC90246
LONRF3 LON peptidase N-terminal domain and ring finger 3
LOXL3 lysyl oxidase-like 3
LPAR4 lysophosphatidic acid receptor 4
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LRP1 low density lipoprotein receptor-related protein 1
LRRC10 leucine rich repeat containing 10
LRRC15 leucine rich repeat containing 15
LRRC17 leucine rich repeat containing 17
LRRC8D leucine rich repeat containing 8 family, member D
LRSAM1 leucine rich repeat and sterile alpha motif containing 1
MAN1B1 mannosidase, alpha, class 1B, member 1
MAP3K12 mitogen-activated protein kinase kinase kinase 12
MAP3K3 mitogen-activated protein kinase kinase kinase 3
MARCH1 membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
MBD5 methyl-CpG binding domain protein 5
MEGF10 multiple EGF-like-domains 10
MGC16275 uncharacterized protein MGC16275
MID1 midline 1
MMP2 matrix metallopeptidase 2
MOSPD2 motile sperm domain containing 2
MRAS muscle RAS oncogene homolog
MRC2 mannose receptor, C type 2
MRRF mitochondrial ribosome recycling factor
MS4A7 membrane-spanning 4-domains, subfamily A, member 7
MSR1 macrophage scavenger receptor 1
MSX2 msh homeobox 2
MUSK muscle, skeletal, receptor tyrosine kinase
MXRA5 matrix-remodelling associated 5
NBL1 neuroblastoma 1, DAN family BMP antagonist
NCAM1 neural cell adhesion molecule 1
NCDN neurochondrin
NCR2 natural cytotoxicity triggering receptor 2
NCS1 neuronal calcium sensor 1
NEK6 NIMA-related kinase 6
NFASC neurofascin
NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
NFE2L1 nuclear factor, erythroid 2-like 1
NKX3-2 NK3 homeobox 2
NLGN4X neuroligin 4, X-linked
NOL6 nucleolar protein 6 (RNA-associated)
NOX4 NADPH oxidase 4
NTNG2 netrin G2
NUP214 nucleoporin 214kDa
OGN osteoglycin
OLFML1 olfactomedin-like 1
OLFML2A olfactomedin-like 2A
OLFML2B olfactomedin-like 2B
OLFML3 olfactomedin-like 3
OR1Q1 olfactory receptor, family 1, subfamily Q, member 1
OR3A1 olfactory receptor, family 3, subfamily A, member 1
OR4K17 olfactory receptor, family 4, subfamily K, member 17
OR52K1 olfactory receptor, family 52, subfamily K, member 1
OR5AR1 olfactory receptor, family 5, subfamily AR, member 1 (gene/pseudogene)
OR7C2 olfactory receptor, family 7, subfamily C, member 2
OR9K2 olfactory receptor, family 9, subfamily K, member 2
OSBPL5 oxysterol binding protein-like 5
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
P4HA3 prolyl 4-hydroxylase, alpha polypeptide III
PAX7 paired box 7
PCDHGA12 protocadherin gamma subfamily A, 12
PCDHGA5 protocadherin gamma subfamily A, 5
PCDHGB1 protocadherin gamma subfamily B, 1
PCOLCE procollagen C-endopeptidase enhancer
PDE3A phosphodiesterase 3A, cGMP-inhibited
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PDGFRL platelet-derived growth factor receptor-like
PDZRN3 PDZ domain containing ring finger 3
PEAK1 pseudopodium-enriched atypical kinase 1
PHLDB1 pleckstrin homology-like domain, family B, member 1
PIP5K1C phosphatidylinositol-4-phosphate 5-kinase, type I, gamma
PKD2 polycystic kidney disease 2 (autosomal dominant)
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
PLXNC1 plexin C1
PLXND1 plexin D1
POLE3 polymerase (DNA directed), epsilon 3, accessory subunit
POM121L4P POM121 transmembrane nucleoporin-like 4 pseudogene
POSTN periostin, osteoblast specific factor
PPAPDC1A phosphatidic acid phosphatase type 2 domain containing 1A
PPEF1 protein phosphatase, EF-hand calcium binding domain 1
PRDM6 PR domain containing 6
PREPL prolyl endopeptidase-like
PRKD1 protein kinase D1
PROX2 prospero homeobox 2
PRRC2B proline-rich coiled-coil 2B
PRRX1 paired related homeobox 1
PRRX2 paired related homeobox 2
PRSS3 protease, serine, 3
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTH1R parathyroid hormone 1 receptor
PTPDC1 protein tyrosine phosphatase domain containing 1
PTPRM protein tyrosine phosphatase, receptor type, M
QRFP pyroglutamylated RFamide peptide
RAB3IL1 RAB3A interacting protein (rabin3)-like 1
RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1
RASA3 RAS p21 protein activator 3
RASA4 RAS p21 protein activator 4
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2
RBM18 RNA binding motif protein 18
RDH5 retinol dehydrogenase 5 (11-cis/9-cis)
RFPL2 ret finger protein-like 2
RFPL3 ret finger protein-like 3
RFTN2 raftlin family member 2
RGS3 regulator of G-protein signaling 3
RHOBTB1 Rho-related BTB domain containing 1
RIMBP3 RIMS binding protein 3
RIMBP3C RIMS binding protein 3C
RNF152 ring finger protein 152
RNF20 ring finger protein 20, E3 ubiquitin protein ligase
RP1L1 retinitis pigmentosa 1-like 1
RRNAD1 ribosomal RNA adenine dimethylase domain containing 1
RSAD2 radical S-adenosyl methionine domain containing 2
RXRA retinoid X receptor, alpha
SALL4 spalt-like transcription factor 4
SAMD9 sterile alpha motif domain containing 9
SAMD9L sterile alpha motif domain containing 9-like
SCN3B sodium channel, voltage gated, type III beta subunit
SCN5A sodium channel, voltage gated, type V alpha subunit
SEC16A SEC16 homolog A (S. cerevisiae)
SEL1L2 sel-1 suppressor of lin-12-like 2 (C. elegans)
SEPT4 septin 4
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SERPING1 serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
SETX senataxin
SFRP2 secreted frizzled-related protein 2
SFRP4 secreted frizzled-related protein 4
SFXN3 sideroflexin 3
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1
SH2D3C SH2 domain containing 3C
SHANK1 SH3 and multiple ankyrin repeat domains 1
SIGLEC1 sialic acid binding Ig-like lectin 1, sialoadhesin
SIGLEC12 sialic acid binding Ig-like lectin 12 (gene/pseudogene)
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8
SLC39A13 solute carrier family 39 (zinc transporter), member 13
SLC44A1 solute carrier family 44 (choline transporter), member 1
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLCO2B1 solute carrier organic anion transporter family, member 2B1
SLITRK4 SLIT and NTRK-like family, member 4
SMAD9 SMAD family member 9
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal
SNAI1 snail family zinc finger 1
SNX30 sorting nexin family member 30
SP110 SP110 nuclear body protein
SP7 Sp7 transcription factor
SPATA9 spermatogenesis associated 9
SPON1 spondin 1, extracellular matrix protein
SPTAN1 spectrin, alpha, non-erythrocytic 1
SRGAP2 SLIT-ROBO Rho GTPase activating protein 2
SSC5D scavenger receptor cysteine rich family, 5 domains
SSPO SCO-spondin
SSUH2 ssu-2 homolog (C. elegans)
STAB1 stabilin 1
STARD13 StAR-related lipid transfer (START) domain containing 13
STARD8 StAR-related lipid transfer (START) domain containing 8
STKLD1 serine/threonine kinase-like domain containing 1
STON1 stonin 1
STX17 syntaxin 17
STXBP1 syntaxin binding protein 1
SULF1 sulfatase 1
SURF4 surfeit 4
SWI5 SWI5 recombination repair homolog (yeast)
SYT11 synaptotagmin XI
TBC1D13 TBC1 domain family, member 13
TCF12 transcription factor 12
TDRD7 tudor domain containing 7
TEP1 telomerase-associated protein 1
TGFB3 transforming growth factor, beta 3
TIAM2 T-cell lymphoma invasion and metastasis 2
TLR4 toll-like receptor 4
TLR7 toll-like receptor 7
TMED7-TICAM2 TMED7-TICAM2 readthrough
TMEFF1 transmembrane protein with EGF-like and two follistatin-like domains 1
TMEM119 transmembrane protein 119
TMEM132B transmembrane protein 132B
TMEM132D transmembrane protein 132D
TMEM140 transmembrane protein 140
TMEM204 transmembrane protein 204
TMEM245 transmembrane protein 245
TNS3 tensin 3
TOR1B torsin family 1, member B (torsin B)
TOR2A torsin family 2, member A
TOX thymocyte selection-associated high mobility group box
TPP1 tripeptidyl peptidase I
TRIM36 tripartite motif containing 36
TRIM6-TRIM34 TRIM6-TRIM34 readthrough
TRIM61 tripartite motif containing 61
TSHZ3 teashirt zinc finger homeobox 3
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
TTYH2 tweety family member 2
TXNIP thioredoxin interacting protein
UBTD1 ubiquitin domain containing 1
UNC5B unc-5 homolog B (C. elegans)
USP20 ubiquitin specific peptidase 20
VAV2 vav 2 guanine nucleotide exchange factor
VCAN versican
ZBTB43 zinc finger and BTB domain containing 43
ZC3H12B zinc finger CCCH-type containing 12B
ZCCHC5 zinc finger, CCHC domain containing 5
ZDHHC12 zinc finger, DHHC-type containing 12
ZER1 zyg-11 related, cell cycle regulator
ZNF275 zinc finger protein 275
ZNF34 zinc finger protein 34
ZNF423 zinc finger protein 423
ZNF454 zinc finger protein 454
ZNF469 zinc finger protein 469
ZNF484 zinc finger protein 484
ZNF490 zinc finger protein 490
ZNF510 zinc finger protein 510
ZNF521 zinc finger protein 521
ZNF646 zinc finger protein 646
ZNF746 zinc finger protein 746
ZNF79 zinc finger protein 79
ZNFX1 zinc finger, NFX1-type containing 1
ZSCAN23 zinc finger and SCAN domain containing 23

low expression

Symbol Name
SRSF2 serine/arginine-rich splicing factor 2