Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7388-01A-11R-2016-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

388 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7388-01A-11R-2016-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A4GNT alpha-1,4-N-acetylglucosaminyltransferase
ABCB10 ATP-binding cassette, sub-family B (MDR/TAP), member 10
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
ACOT9 acyl-CoA thioesterase 9
ACTL6A actin-like 6A
ADAM20 ADAM metallopeptidase domain 20
ADAM6 ADAM metallopeptidase domain 6 (pseudogene)
ADGRE3 adhesion G protein-coupled receptor E3
ADPRH ADP-ribosylarginine hydrolase
ADRBK2 adrenergic, beta, receptor kinase 2
AGO4 argonaute RISC catalytic component 4
AKAP9 A kinase (PRKA) anchor protein 9
ANKIB1 ankyrin repeat and IBR domain containing 1
ANKRD11 ankyrin repeat domain 11
ANKRD20A8P ankyrin repeat domain 20 family, member A8, pseudogene
ANP32A-IT1 ANP32A intronic transcript 1
APPL2 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
ARF3 ADP-ribosylation factor 3
ARID2 AT rich interactive domain 2 (ARID, RFX-like)
ARL17B ADP-ribosylation factor-like 17B
ATP11B ATPase, class VI, type 11B
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4
ATXN1 ataxin 1
ATXN3 ataxin 3
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
BAGE B melanoma antigen
BAGE2 B melanoma antigen family, member 2
BTBD9 BTB (POZ) domain containing 9
BTG2 BTG family, member 2
C15ORF54 chromosome 15 open reading frame 54
C22ORF34 chromosome 22 open reading frame 34
C3ORF20 chromosome 3 open reading frame 20
C7ORF43 chromosome 7 open reading frame 43
C7ORF69 chromosome 7 open reading frame 69
CA5B carbonic anhydrase VB, mitochondrial
CACNA1I calcium channel, voltage-dependent, T type, alpha 1I subunit
CACNB3 calcium channel, voltage-dependent, beta 3 subunit
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3
CBX6 chromobox homolog 6
CCDC132 coiled-coil domain containing 132
CCDC38 coiled-coil domain containing 38
CCDC89 coiled-coil domain containing 89
CCNT1 cyclin T1
CCR4 chemokine (C-C motif) receptor 4
CD200R1L CD200 receptor 1-like
CD300E CD300e molecule
CD79A CD79a molecule, immunoglobulin-associated alpha
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH12 cadherin 12, type 2 (N-cadherin 2)
CDRT15 CMT1A duplicated region transcript 15
CDYL2 chromodomain protein, Y-like 2
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CEACAM8 carcinoembryonic antigen-related cell adhesion molecule 8
CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding)
CEP104 centrosomal protein 104kDa
CEP350 centrosomal protein 350kDa
CERK ceramide kinase
CFAP69 cilia and flagella associated protein 69
CHRM3 cholinergic receptor, muscarinic 3
CHRNB4 cholinergic receptor, nicotinic, beta 4 (neuronal)
CHST7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
CLCN5 chloride channel, voltage-sensitive 5
CLDN12 claudin 12
CLDN15 claudin 15
CMTM2 CKLF-like MARVEL transmembrane domain containing 2
CNR1 cannabinoid receptor 1 (brain)
COL15A1 collagen, type XV, alpha 1
COL6A5 collagen, type VI, alpha 5
COL6A6 collagen, type VI, alpha 6
CPA3 carboxypeptidase A3 (mast cell)
CPNE5 copine V
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CRLF2 cytokine receptor-like factor 2
CSF2RB colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
CSF3R colony stimulating factor 3 receptor (granulocyte)
CSMD1 CUB and Sushi multiple domains 1
CSNK1G2-AS1 CSNK1G2 antisense RNA 1
CTAG2 cancer/testis antigen 2
CTCF CCCTC-binding factor (zinc finger protein)
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR2 chemokine (C-X-C motif) receptor 2
CXORF23 chromosome X open reading frame 23
CXORF49B chromosome X open reading frame 49B
CXORF56 chromosome X open reading frame 56
DCLRE1A DNA cross-link repair 1A
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
DEFB109P1B defensin, beta 109, pseudogene 1B
DERL3 derlin 3
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38
DMTF1 cyclin D binding myb-like transcription factor 1
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8
DNAJC27 DnaJ (Hsp40) homolog, subfamily C, member 27
DOCK1 dedicator of cytokinesis 1
DSPP dentin sialophosphoprotein
DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1
EDEM1 ER degradation enhancer, mannosidase alpha-like 1
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
EP300 E1A binding protein p300
ERN1 endoplasmic reticulum to nucleus signaling 1
FAM160B1 family with sequence similarity 160, member B1
FAM218A family with sequence similarity 218, member A
FAM27L family with sequence similarity 27-like
FAM46C family with sequence similarity 46, member C
FAM66E family with sequence similarity 66, member E
FAM9C family with sequence similarity 9, member C
FCAR Fc fragment of IgA receptor
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
FCN1 ficolin (collagen/fibrinogen domain containing) 1
FCRL5 Fc receptor-like 5
FCRLB Fc receptor-like B
FGFR2 fibroblast growth factor receptor 2
FICD FIC domain containing
FIGNL2 fidgetin-like 2
FNIP2 folliculin interacting protein 2
FOXD4L5 forkhead box D4-like 5
FPR1 formyl peptide receptor 1
FPR2 formyl peptide receptor 2
FSHB follicle stimulating hormone, beta polypeptide
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GAGE1 G antigen 1
GAGE10 G antigen 10
GAGE12D G antigen 12D
GAGE2B G antigen 2B
GAGE2D G antigen 2D
GAGE4 G antigen 4
GATAD2B GATA zinc finger domain containing 2B
GCM1 glial cells missing homolog 1 (Drosophila)
GFRA2 GDNF family receptor alpha 2
GLCCI1 glucocorticoid induced 1
GLRA2 glycine receptor, alpha 2
GLT1D1 glycosyltransferase 1 domain containing 1
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4
GPR15 G protein-coupled receptor 15
GPR20 G protein-coupled receptor 20
GPR52 G protein-coupled receptor 52
GRID1 glutamate receptor, ionotropic, delta 1
GSE1 Gse1 coiled-coil protein
GTF2A1 general transcription factor IIA, 1, 19/37kDa
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
HBBP1 hemoglobin, beta pseudogene 1
HCG9 HLA complex group 9 (non-protein coding)
HDAC4 histone deacetylase 4
HDAC7 histone deacetylase 7
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
HNF4G hepatocyte nuclear factor 4, gamma
HOXB4 homeobox B4
HOXD4 homeobox D4
HRG histidine-rich glycoprotein
HTR7P1 5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1
IKZF5 IKAROS family zinc finger 5 (Pegasus)
ILDR2 immunoglobulin-like domain containing receptor 2
INE1 inactivation escape 1 (non-protein coding)
INO80D INO80 complex subunit D
INTS4P1 integrator complex subunit 4 pseudogene 1
IQSEC2 IQ motif and Sec7 domain 2
IRF4 interferon regulatory factor 4
ITGA8 integrin, alpha 8
ITPKB inositol-trisphosphate 3-kinase B
JAKMIP3 Janus kinase and microtubule interacting protein 3
JCHAIN joining chain of multimeric IgA and IgM
KCNA3 potassium channel, voltage gated shaker related subfamily A, member 3
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2
KCNMB3 potassium channel subfamily M regulatory beta subunit 3
KDM5C lysine (K)-specific demethylase 5C
KDM6A lysine (K)-specific demethylase 6A
KIAA0125 KIAA0125
KIAA0754 KIAA0754
KIAA1324L KIAA1324-like
KIAA1598
KIF21B kinesin family member 21B
KIF3A kinesin family member 3A
KLHL3 kelch-like family member 3
KRIT1 KRIT1, ankyrin repeat containing
KRTAP19-1 keratin associated protein 19-1
LAMP3 lysosomal-associated membrane protein 3
LAX1 lymphocyte transmembrane adaptor 1
LCN9 lipocalin 9
LGI3 leucine-rich repeat LGI family, member 3
LGSN lengsin, lens protein with glutamine synthetase domain
LILRA1 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1
LILRA2 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2
LINC00239 long intergenic non-protein coding RNA 239
LOC100132831 A20-binding inhibitor of NF-kappaB activation 2 pseudogene
LOC100133050 glucuronidase, beta pseudogene
LOC100272216 uncharacterized LOC100272216
LOC148696 uncharacterized LOC148696
LOC286238 uncharacterized LOC286238
LOC400927 TPTE and PTEN homologous inositol lipid phosphatase pseudogene
LOC613037 nuclear pore complex interacting protein pseudogene
LOC650293 seven transmembrane helix receptor
LRRK2 leucine-rich repeat kinase 2
MAGEA10 melanoma antigen family A10
MAGEA9B melanoma antigen family A9B
MAN1A2 mannosidase, alpha, class 1A, member 2
MAP10 microtubule-associated protein 10
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
MAP3K12 mitogen-activated protein kinase kinase kinase 12
MAP9 microtubule-associated protein 9
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
MC4R melanocortin 4 receptor
MCF2L MCF.2 cell line derived transforming sequence-like
MCHR2 melanin-concentrating hormone receptor 2
MEX3B mex-3 RNA binding family member B
MFN1 mitofusin 1
MMP21 matrix metallopeptidase 21
MNDA myeloid cell nuclear differentiation antigen
MON1B MON1 secretory trafficking family member B
MS4A2 membrane-spanning 4-domains, subfamily A, member 2
MSL3 male-specific lethal 3 homolog (Drosophila)
MTVR2 mouse mammary tumor virus receptor homolog 2
NAP1L6 nucleosome assembly protein 1-like 6
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
NLRP12 NLR family, pyrin domain containing 12
NUGGC nuclear GTPase, germinal center associated
NXF2 nuclear RNA export factor 2
OPTC opticin
OR2AE1 olfactory receptor, family 2, subfamily AE, member 1
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2
OR4D1 olfactory receptor, family 4, subfamily D, member 1
OR51G1 olfactory receptor, family 51, subfamily G, member 1 (gene/pseudogene)
OR51I2 olfactory receptor, family 51, subfamily I, member 2
OR52K2 olfactory receptor, family 52, subfamily K, member 2
OR52L1 olfactory receptor, family 52, subfamily L, member 1
OR56A1 olfactory receptor, family 56, subfamily A, member 1
OR56A3 olfactory receptor, family 56, subfamily A, member 3
OR56B4 olfactory receptor, family 56, subfamily B, member 4
OR5B21 olfactory receptor, family 5, subfamily B, member 21
OR5P2 olfactory receptor, family 5, subfamily P, member 2
OR6B2 olfactory receptor, family 6, subfamily B, member 2
OR6K6 olfactory receptor, family 6, subfamily K, member 6
OR7C2 olfactory receptor, family 7, subfamily C, member 2
OR8S1 olfactory receptor, family 8, subfamily S, member 1
ORAI2 ORAI calcium release-activated calcium modulator 2
PAGE4 P antigen family, member 4 (prostate associated)
PAPPA pregnancy-associated plasma protein A, pappalysin 1
PAQR3 progestin and adipoQ receptor family member III
PCDH17 protocadherin 17
PCDHB4 protocadherin beta 4
PCDHGA9 protocadherin gamma subfamily A, 9
PCDHGC4 protocadherin gamma subfamily C, 4
PCYT1B phosphate cytidylyltransferase 1, choline, beta
PDZD8 PDZ domain containing 8
PDZD9 PDZ domain containing 9
PEX1 peroxisomal biogenesis factor 1
PGK2 phosphoglycerate kinase 2
PHEX phosphate regulating endopeptidase homolog, X-linked
PI15 peptidase inhibitor 15
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
PIM2 Pim-2 proto-oncogene, serine/threonine kinase
PIR pirin (iron-binding nuclear protein)
PLCXD2 phosphatidylinositol-specific phospholipase C, X domain containing 2
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
PLET1 placenta expressed transcript 1
PNOC prepronociceptin
PNPLA4 patatin-like phospholipase domain containing 4
POTEF POTE ankyrin domain family, member F
POU6F2 POU class 6 homeobox 2
PRICKLE3 prickle homolog 3 (Drosophila)
PROK2 prokineticin 2
PTCHD3 patched domain containing 3
RAB11FIP2 RAB11 family interacting protein 2 (class I)
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RASGRP4 RAS guanyl releasing protein 4
RBMXL2 RNA binding motif protein, X-linked-like 2
RC3H1 ring finger and CCCH-type domains 1
REG1A regenerating islet-derived 1 alpha
RFXAP regulatory factor X-associated protein
RGAG4 retrotransposon gag domain containing 4
RGPD8 RANBP2-like and GRIP domain containing 8
RGS5 regulator of G-protein signaling 5
RPL13AP17 ribosomal protein L13a pseudogene 17
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3
SCAF11 SR-related CTD-associated factor 11
SCARNA9L small Cajal body-specific RNA 9-like
SCN3A sodium channel, voltage gated, type III alpha subunit
SDE2 SDE2 telomere maintenance homolog (S. pombe)
SEL1L sel-1 suppressor of lin-12-like (C. elegans)
SELE selectin E
SELP selectin P (granule membrane protein 140kDa, antigen CD62)
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SENP1 SUMO1/sentrin specific peptidase 1
SERPINA13P serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 13, pseudogene
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
SH3BP5L SH3-binding domain protein 5-like
SHOC2 soc-2 suppressor of clear homolog (C. elegans)
SIAH3 siah E3 ubiquitin protein ligase family member 3
SIGLEC17P sialic acid binding Ig-like lectin 17, pseudogene
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2
SLC30A8 solute carrier family 30 (zinc transporter), member 8
SLC48A1 solute carrier family 48 (heme transporter), member 1
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9
SLC7A13 solute carrier family 7 (anionic amino acid transporter), member 13
SMC1A structural maintenance of chromosomes 1A
SMC3 structural maintenance of chromosomes 3
SMG7 SMG7 nonsense mediated mRNA decay factor
SMYD3 SET and MYND domain containing 3
SNCB synuclein, beta
SNORA29 small nucleolar RNA, H/ACA box 29
SNORA4 small nucleolar RNA, H/ACA box 4
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA74B small nucleolar RNA, H/ACA box 74B
SPATA31A1 SPATA31 subfamily A, member 1
SPATA31A5 SPATA31 subfamily A, member 5
SPATA31A6 SPATA31 subfamily A, member 6
SPDYE1 speedy/RINGO cell cycle regulator family member E1
SPDYE4 speedy/RINGO cell cycle regulator family member E4
SPDYE5 speedy/RINGO cell cycle regulator family member E5
SPDYE6 speedy/RINGO cell cycle regulator family member E6
SPDYE7P speedy/RINGO cell cycle regulator family member E7, pseudogene
SWT1 SWT1 RNA endoribonuclease homolog (S. cerevisiae)
SYAP1 synapse associated protein 1
SYN3 synapsin III
SYNE3 spectrin repeat containing, nuclear envelope family member 3
SYNGAP1 synaptic Ras GTPase activating protein 1
SYT13 synaptotagmin XIII
SYT5 synaptotagmin V
SYTL5 synaptotagmin-like 5
TAS2R3 taste receptor, type 2, member 3
TAS2R4 taste receptor, type 2, member 4
TAS2R40 taste receptor, type 2, member 40
TBL1X transducin (beta)-like 1X-linked
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1
TBX20 T-box 20
TCEANC transcription elongation factor A (SII) N-terminal and central domain containing
TDRD1 tudor domain containing 1
TECPR1 tectonin beta-propeller repeat containing 1
TENM1 teneurin transmembrane protein 1
TFE3 transcription factor binding to IGHM enhancer 3
TFF2 trefoil factor 2
TLR9 toll-like receptor 9
TLX1 T-cell leukemia homeobox 1
TMEM95 transmembrane protein 95
TNFRSF10C tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain
TNFRSF17 tumor necrosis factor receptor superfamily, member 17
TPTE transmembrane phosphatase with tensin homology
TRIM51 tripartite motif-containing 51
TRRAP transformation/transcription domain-associated protein
TRUB1 TruB pseudouridine (psi) synthase family member 1
TSPAN11 tetraspanin 11
TSPYL4 TSPY-like 4
TSPYL5 TSPY-like 5
TTC14 tetratricopeptide repeat domain 14
TXNDC11 thioredoxin domain containing 11
TXNDC5 thioredoxin domain containing 5 (endoplasmic reticulum)
UBE2J1 ubiquitin-conjugating enzyme E2, J1
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
USP9X ubiquitin specific peptidase 9, X-linked
VANGL2 VANGL planar cell polarity protein 2
VTI1A vesicle transport through interaction with t-SNAREs 1A
WDR37 WD repeat domain 37
WDR88 WD repeat domain 88
WNT1 wingless-type MMTV integration site family, member 1
WNT10B wingless-type MMTV integration site family, member 10B
WWP2 WW domain containing E3 ubiquitin protein ligase 2
XAGE1E X antigen family, member 1E
ZBED9 zinc finger, BED-type containing 9
ZBTB40 zinc finger and BTB domain containing 40
ZC3H12D zinc finger CCCH-type containing 12D
ZFHX3 zinc finger homeobox 3
ZFP82 ZFP82 zinc finger protein
ZFP92 ZFP92 zinc finger protein
ZFX zinc finger protein, X-linked
ZKSCAN1 zinc finger with KRAB and SCAN domains 1
ZKSCAN3 zinc finger with KRAB and SCAN domains 3
ZMAT3 zinc finger, matrin-type 3
ZNF100 zinc finger protein 100
ZNF215 zinc finger protein 215
ZNF280A zinc finger protein 280A
ZNF354C zinc finger protein 354C
ZNF397 zinc finger protein 397
ZNF43 zinc finger protein 43
ZNF536 zinc finger protein 536
ZNF573 zinc finger protein 573
ZNF639 zinc finger protein 639
ZNF641 zinc finger protein 641
ZNF669 zinc finger protein 669
ZNF678 zinc finger protein 678
ZNF679 zinc finger protein 679
ZNF701 zinc finger protein 701
ZNF81 zinc finger protein 81
ZNF826P zinc finger protein 826, pseudogene
ZSCAN25 zinc finger and SCAN domain containing 25
ZSCAN5B zinc finger and SCAN domain containing 5B