Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4C7-01A-11R-A24Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

278 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4C7-01A-11R-A24Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
ADAM19 ADAM metallopeptidase domain 19
ADRA1B adrenoceptor alpha 1B
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
ALK anaplastic lymphoma receptor tyrosine kinase
AMIGO2 adhesion molecule with Ig-like domain 2
ANKLE2 ankyrin repeat and LEM domain containing 2
ANXA8L1 annexin A8-like 1
APCDD1L adenomatosis polyposis coli down-regulated 1-like
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ARNTL aryl hydrocarbon receptor nuclear translocator-like
ARTN artemin
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
BCAR3 breast cancer anti-estrogen resistance 3
BMF Bcl2 modifying factor
BMP1 bone morphogenetic protein 1
BMS1 BMS1 ribosome biogenesis factor
BUB3 BUB3 mitotic checkpoint protein
C10ORF2 chromosome 10 open reading frame 2
C10ORF88 chromosome 10 open reading frame 88
C11ORF95 chromosome 11 open reading frame 95
C2ORF27A chromosome 2 open reading frame 27A
C2ORF66 chromosome 2 open reading frame 66
C3ORF36 chromosome 3 open reading frame 36
C9ORF47 chromosome 9 open reading frame 47
C9ORF85 chromosome 9 open reading frame 85
CACNG4 calcium channel, voltage-dependent, gamma subunit 4
CACUL1 CDK2-associated, cullin domain 1
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CCBE1 collagen and calcium binding EGF domains 1
CCDC63 coiled-coil domain containing 63
CCNJL cyclin J-like
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3
CDH2 cadherin 2, type 1, N-cadherin (neuronal)
CDK11A cyclin-dependent kinase 11A
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35)
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CGB7 chorionic gonadotropin, beta polypeptide 7
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
CHST3 carbohydrate (chondroitin 6) sulfotransferase 3
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2
CNTNAP3 contactin associated protein-like 3
COA7 cytochrome c oxidase assembly factor 7 (putative)
COL13A1 collagen, type XIII, alpha 1
COL22A1 collagen, type XXII, alpha 1
COL27A1 collagen, type XXVII, alpha 1
COL4A1 collagen, type IV, alpha 1
COL4A2 collagen, type IV, alpha 2
COPS8 COP9 signalosome subunit 8
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
CPZ carboxypeptidase Z
CTSZ cathepsin Z
CYB561A3 cytochrome b561 family, member A3
CYP27C1 cytochrome P450, family 27, subfamily C, polypeptide 1
CYTH1 cytohesin 1
DCLK3 doublecortin-like kinase 3
DDX31 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DHX37 DEAH (Asp-Glu-Ala-His) box polypeptide 37
DKFZP434J0226 uncharacterized LOC93429
DKK3 dickkopf WNT signaling pathway inhibitor 3
DNAH17 dynein, axonemal, heavy chain 17
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DPH2 DPH2 homolog (S. cerevisiae)
DPP9 dipeptidyl-peptidase 9
DPYSL3 dihydropyrimidinase-like 3
DSCAM Down syndrome cell adhesion molecule
EFNB2 ephrin-B2
ELAVL2 ELAV like neuron-specific RNA binding protein 2
EML3 echinoderm microtubule associated protein like 3
ENPEP glutamyl aminopeptidase (aminopeptidase A)
EPHB2 EPH receptor B2
EPO erythropoietin
EVA1A eva-1 homolog A (C. elegans)
FAM159A family with sequence similarity 159, member A
FAM201A family with sequence similarity 201, member A
FAM21A family with sequence similarity 21, member A
FAM222B family with sequence similarity 222, member B
FAM27C family with sequence similarity 27, member C
FAM35DP family with sequence similarity 35, member A pseudogene
FAP fibroblast activation protein, alpha
FHOD3 formin homology 2 domain containing 3
FKBP5 FK506 binding protein 5
FLRT3 fibronectin leucine rich transmembrane protein 3
FN1 fibronectin 1
FOXC2 forkhead box C2
FOXL1 forkhead box L1
FOXO3 forkhead box O3
FSTL3 follistatin-like 3 (secreted glycoprotein)
GALNT10 polypeptide N-acetylgalactosaminyltransferase 10
GAS6 growth arrest-specific 6
GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2
GJC1 gap junction protein, gamma 1, 45kDa
GPAM glycerol-3-phosphate acyltransferase, mitochondrial
GPC4 glypican 4
GPR39 G protein-coupled receptor 39
GPR68 G protein-coupled receptor 68
GPSM2 G-protein signaling modulator 2
GRAMD2 GRAM domain containing 2
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa
HES7 hes family bHLH transcription factor 7
HEYL hes-related family bHLH transcription factor with YRPW motif-like
HMGXB3 HMG box domain containing 3
HMHB1 histocompatibility (minor) HB-1
HS3ST3B1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
HS6ST1 heparan sulfate 6-O-sulfotransferase 1
HTR5A 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled
HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled
IBSP integrin-binding sialoprotein
IFNA1 interferon, alpha 1
IFNA13 interferon, alpha 13
IFNE interferon, epsilon
IKZF5 IKAROS family zinc finger 5 (Pegasus)
INPP5B inositol polyphosphate-5-phosphatase, 75kDa
IRX1 iroquois homeobox 1
ITGB6 integrin, beta 6
IVNS1ABP influenza virus NS1A binding protein
KANK4 KN motif and ankyrin repeat domains 4
KCNE4 potassium channel, voltage gated subfamily E regulatory beta subunit 4
KCNF1 potassium channel, voltage gated modifier subfamily F, member 1
KCNG2 potassium channel, voltage gated modifier subfamily G, member 2
KDM4A lysine (K)-specific demethylase 4A
KIAA1755 KIAA1755
KIF3C kinesin family member 3C
KLF9 Kruppel-like factor 9
LAMB1 laminin, beta 1
LDHAL6B lactate dehydrogenase A-like 6B
LHB luteinizing hormone beta polypeptide
LHX6 LIM homeobox 6
LINC00242 long intergenic non-protein coding RNA 242
LINC00319 long intergenic non-protein coding RNA 319
LINC00575 long intergenic non-protein coding RNA 575
LOC285593 uncharacterized LOC285593
LOC285692 uncharacterized LOC285692
LOC285696 uncharacterized LOC285696
LOC388692 uncharacterized LOC388692
LRIG3 leucine-rich repeats and immunoglobulin-like domains 3
LRRN4 leucine rich repeat neuronal 4
LTBP2 latent transforming growth factor beta binding protein 2
MAP3K12 mitogen-activated protein kinase kinase kinase 12
MARVELD1 MARVEL domain containing 1
MED22 mediator complex subunit 22
MEF2BNB-MEF2B MEF2BNB-MEF2B readthrough
MEN1 multiple endocrine neoplasia I
MGAT5B mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
MGC12916 uncharacterized protein MGC12916
MGEA5 meningioma expressed antigen 5 (hyaluronidase)
MIR22HG MIR22 host gene
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae)
MOB3B MOB kinase activator 3B
MTSS1 metastasis suppressor 1
MYC v-myc avian myelocytomatosis viral oncogene homolog
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NANOS1 nanos homolog 1 (Drosophila)
NAPB N-ethylmaleimide-sensitive factor attachment protein, beta
NCKAP5L NCK-associated protein 5-like
NHLH1 nescient helix loop helix 1
NOL8 nucleolar protein 8
NR2C1 nuclear receptor subfamily 2, group C, member 1
NTNG1 netrin G1
OR2B3 olfactory receptor, family 2, subfamily B, member 3
OR2H1 olfactory receptor, family 2, subfamily H, member 1
OR2J3 olfactory receptor, family 2, subfamily J, member 3
OR51E1 olfactory receptor, family 51, subfamily E, member 1
OR5P2 olfactory receptor, family 5, subfamily P, member 2
PCDHGA10 protocadherin gamma subfamily A, 10
PCNXL3 pecanex-like 3 (Drosophila)
PDDC1 Parkinson disease 7 domain containing 1
PER1 period circadian clock 1
PGBD3 piggyBac transposable element derived 3
PGM2L1 phosphoglucomutase 2-like 1
PHLDB1 pleckstrin homology-like domain, family B, member 1
PIGG phosphatidylinositol glycan anchor biosynthesis, class G
PLA2G12B phospholipase A2, group XIIB
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2
PMEPA1 prostate transmembrane protein, androgen induced 1
PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1
PRICKLE2 prickle homolog 2 (Drosophila)
PRO0628 uncharacterized LOC29053
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PTCHD2 patched domain containing 2
PTGDR prostaglandin D2 receptor (DP)
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa
PTK7 protein tyrosine kinase 7 (inactive)
PXDN peroxidasin
PYGB phosphorylase, glycogen; brain
RDH16 retinol dehydrogenase 16 (all-trans)
RFK riboflavin kinase
RNF220 ring finger protein 220
S1PR3 sphingosine-1-phosphate receptor 3
SAMD4A sterile alpha motif domain containing 4A
SEC14L2 SEC14-like 2 (S. cerevisiae)
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SF3A3 splicing factor 3a, subunit 3, 60kDa
SFR1 SWI5-dependent recombination repair 1
SFXN3 sideroflexin 3
SH3GL3 SH3-domain GRB2-like 3
SH3RF3 SH3 domain containing ring finger 3
SHC3 SHC (Src homology 2 domain containing) transforming protein 3
SHOX short stature homeobox
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4
SLC25A27 solute carrier family 25, member 27
SLC2A6 solute carrier family 2 (facilitated glucose transporter), member 6
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
SLC35E2 solute carrier family 35, member E2
SLC35F2 solute carrier family 35, member F2
SLC38A4 solute carrier family 38, member 4
SLCO1B1 solute carrier organic anion transporter family, member 1B1
SLCO1B7 solute carrier organic anion transporter family, member 1B7 (non-functional)
SLCO2A1 solute carrier organic anion transporter family, member 2A1
SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
SMC5 structural maintenance of chromosomes 5
SMIM3 small integral membrane protein 3
SNAI2 snail family zinc finger 2
SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa
SNORA16A small nucleolar RNA, H/ACA box 16A
SNORA5A small nucleolar RNA, H/ACA box 5A
SORCS2 sortilin-related VPS10 domain containing receptor 2
SOX12 SRY (sex determining region Y)-box 12
SP110 SP110 nuclear body protein
SPATA25 spermatogenesis associated 25
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1
SPON2 spondin 2, extracellular matrix protein
ST5 suppression of tumorigenicity 5
STAG3L2 stromal antigen 3-like 2 (pseudogene)
STX2 syntaxin 2
SULF2 sulfatase 2
SUSD6 sushi domain containing 6
SYS1-DBNDD2 SYS1-DBNDD2 readthrough (NMD candidate)
TAS2R50 taste receptor, type 2, member 50
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TCTN3 tectonic family member 3
TDO2 tryptophan 2,3-dioxygenase
TFCP2L1 transcription factor CP2-like 1
TGFBI transforming growth factor, beta-induced, 68kDa
TGM2 transglutaminase 2
TLL1 tolloid-like 1
TLL2 tolloid-like 2
TMEM132A transmembrane protein 132A
TMEM2 transmembrane protein 2
TMEM200A transmembrane protein 200A
TMEM245 transmembrane protein 245
TMEM63C transmembrane protein 63C
TOX2 TOX high mobility group box family member 2
TRERF1 transcriptional regulating factor 1
TRHDE thyrotropin-releasing hormone degrading enzyme
TRIM32 tripartite motif containing 32
TRIM36 tripartite motif containing 36
TRIM46 tripartite motif containing 46
TRIM66 tripartite motif containing 66
TSC22D3 TSC22 domain family, member 3
TTPAL tocopherol (alpha) transfer protein-like
TUT1 terminal uridylyl transferase 1, U6 snRNA-specific
UBTD1 ubiquitin domain containing 1
VAV2 vav 2 guanine nucleotide exchange factor
VMP1 vacuole membrane protein 1
VTI1A vesicle transport through interaction with t-SNAREs 1A
WDR11 WD repeat domain 11
WDR81 WD repeat domain 81
WNT5B wingless-type MMTV integration site family, member 5B
XYLT1 xylosyltransferase I
ZBTB3 zinc finger and BTB domain containing 3
ZCCHC11 zinc finger, CCHC domain containing 11
ZDHHC16 zinc finger, DHHC-type containing 16
ZFYVE27 zinc finger, FYVE domain containing 27
ZNF114 zinc finger protein 114
ZNF251 zinc finger protein 251
ZNF404 zinc finger protein 404
ZNF485 zinc finger protein 485
ZNF696 zinc finger protein 696
ZNF699 zinc finger protein 699
ZNF707 zinc finger protein 707
ZNF793 zinc finger protein 793

low expression

Symbol Name
ATF6 activating transcription factor 6