Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A6V6-01A-12R-A34R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

425 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A6V6-01A-12R-A34R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ADCY6 adenylate cyclase 6
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide
AGBL3 ATP/GTP binding protein-like 3
AGR2 anterior gradient 2
AKAP17A A kinase (PRKA) anchor protein 17A
AKAP5 A kinase (PRKA) anchor protein 5
AKR1A1 aldo-keto reductase family 1, member A1 (aldehyde reductase)
ALDH16A1 aldehyde dehydrogenase 16 family, member A1
ALG6 ALG6, alpha-1,3-glucosyltransferase
ALX3 ALX homeobox 3
ANKRD10 ankyrin repeat domain 10
ANKRD32 ankyrin repeat domain 32
APOC1P1 apolipoprotein C-I pseudogene 1
APOO apolipoprotein O
ARHGAP9 Rho GTPase activating protein 9
ARR3 arrestin 3, retinal (X-arrestin)
ASAP1-IT1 ASAP1 intronic transcript 1
ATF3 activating transcription factor 3
ATF5 activating transcription factor 5
ATF7IP2 activating transcription factor 7 interacting protein 2
ATG4A autophagy related 4A, cysteine peptidase
ATXN7L2 ataxin 7-like 2
B9D2 B9 protein domain 2
BCAS2 breast carcinoma amplified sequence 2
BCL2L14 BCL2-like 14 (apoptosis facilitator)
BCL2L15 BCL2-like 15
BRCC3 BRCA1/BRCA2-containing complex, subunit 3
C11ORF85 chromosome 11 open reading frame 85
C14ORF39 chromosome 14 open reading frame 39
C15ORF48 chromosome 15 open reading frame 48
C19ORF57 chromosome 19 open reading frame 57
C1GALT1C1 C1GALT1-specific chaperone 1
C1ORF185 chromosome 1 open reading frame 185
C5ORF56 chromosome 5 open reading frame 56
C7ORF34 chromosome 7 open reading frame 34
C8ORF4 chromosome 8 open reading frame 4
C8ORF44 chromosome 8 open reading frame 44
C8ORF74 chromosome 8 open reading frame 74
C9ORF139 chromosome 9 open reading frame 139
C9ORF172 chromosome 9 open reading frame 172
CALML4 calmodulin-like 4
CASP9 caspase 9, apoptosis-related cysteine peptidase
CBS cystathionine-beta-synthase
CBX5 chromobox homolog 5
CC2D2B coiled-coil and C2 domain containing 2B
CCDC146 coiled-coil domain containing 146
CCDC150 coiled-coil domain containing 150
CCDC22 coiled-coil domain containing 22
CCDC97 coiled-coil domain containing 97
CD160 CD160 molecule
CD8A CD8a molecule
CDC7 cell division cycle 7
CDK20 cyclin-dependent kinase 20
CDKN2A cyclin-dependent kinase inhibitor 2A
CDKN2A-AS1 CDKN2A antisense RNA 1 (head to head)
CDKN2B-AS1 CDKN2B antisense RNA 1
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
CDY2B chromodomain protein, Y-linked, 2B
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CENPJ centromere protein J
CENPU centromere protein U
CEP162 centrosomal protein 162kDa
CFAP44 cilia and flagella associated protein 44
CHAF1A chromatin assembly factor 1, subunit A (p150)
CHODL-AS1 CHODL antisense RNA 1
CHTOP chromatin target of PRMT1
CIB3 calcium and integrin binding family member 3
CLDN23 claudin 23
CLDN7 claudin 7
CLGN calmegin
CLNK cytokine-dependent hematopoietic cell linker
CLRN1 clarin 1
CLRN2 clarin 2
CNGA2 cyclic nucleotide gated channel alpha 2
COG7 component of oligomeric golgi complex 7
CR1L complement component (3b/4b) receptor 1-like
CRTAM cytotoxic and regulatory T cell molecule
CSAD cysteine sulfinic acid decarboxylase
CSH2 chorionic somatomammotropin hormone 2
CST13P cystatin 13, pseudogene
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CX3CL1 chemokine (C-X3-C motif) ligand 1
CXCR6 chemokine (C-X-C motif) receptor 6
CXORF56 chromosome X open reading frame 56
CYP4Z1 cytochrome P450, family 4, subfamily Z, polypeptide 1
CYTIP cytohesin 1 interacting protein
DAZAP2 DAZ associated protein 2
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase)
DCST2 DC-STAMP domain containing 2
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
DDX26B DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
DDX59 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
DKFZP434J0226 uncharacterized LOC93429
DLG3 discs, large homolog 3 (Drosophila)
DMRTA2 DMRT-like family A2
DNAH1 dynein, axonemal, heavy chain 1
DRD1 dopamine receptor D1
DRICH1 aspartate-rich 1
DYTN dystrotelin
E2F8 E2F transcription factor 8
EAF2 ELL associated factor 2
ECHDC2 enoyl CoA hydratase domain containing 2
EDARADD EDAR-associated death domain
EEF2K eukaryotic elongation factor 2 kinase
EFCAB7 EF-hand calcium binding domain 7
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific )
EP400NL EP400 N-terminal like
ERICH6B glutamate-rich 6B
EYA2 EYA transcriptional coactivator and phosphatase 2
FAF1 Fas (TNFRSF6) associated factor 1
FAM120C family with sequence similarity 120C
FAM151A family with sequence similarity 151, member A
FAM186A family with sequence similarity 186, member A
FAM3B family with sequence similarity 3, member B
FAM83E family with sequence similarity 83, member E
FMO1 flavin containing monooxygenase 1
FMO3 flavin containing monooxygenase 3
FMR1 fragile X mental retardation 1
FUNDC1 FUN14 domain containing 1
FUNDC2P2 FUN14 domain containing 2 pseudogene 2
GAS8 growth arrest-specific 8
GBP1 guanylate binding protein 1, interferon-inducible
GBP2 guanylate binding protein 2, interferon-inducible
GBP4 guanylate binding protein 4
GBX1 gastrulation brain homeobox 1
GCH1 GTP cyclohydrolase 1
GDF15 growth differentiation factor 15
GGA2 golgi-associated, gamma adaptin ear containing, ARF binding protein 2
GJA9 gap junction protein, alpha 9, 59kDa
GLT6D1 glycosyltransferase 6 domain containing 1
GLTSCR1 glioma tumor suppressor candidate region gene 1
GLUL glutamate-ammonia ligase
GNG4 guanine nucleotide binding protein (G protein), gamma 4
GOLGA2P5 golgin A2 pseudogene 5
GOLPH3L golgi phosphoprotein 3-like
GORAB golgin, RAB6-interacting
GPKOW G patch domain and KOW motifs
GPR171 G protein-coupled receptor 171
GPR25 G protein-coupled receptor 25
GPR31 G protein-coupled receptor 31
GPR89B G protein-coupled receptor 89B
GRAP2 GRB2-related adaptor protein 2
GRIPAP1 GRIP1 associated protein 1
GRTP1 growth hormone regulated TBC protein 1
GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa
GTF2IRD2 GTF2I repeat domain containing 2
GTF2IRD2B GTF2I repeat domain containing 2B
GTF2IRD2P1 GTF2I repeat domain containing 2 pseudogene 1
GTSF1L gametocyte specific factor 1-like
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
H3F3A H3 histone, family 3A
HAPLN3 hyaluronan and proteoglycan link protein 3
HCG26 HLA complex group 26 (non-protein coding)
HCG27 HLA complex group 27 (non-protein coding)
HDAC6 histone deacetylase 6
HDAC8 histone deacetylase 8
HENMT1 HEN1 methyltransferase homolog 1 (Arabidopsis)
HIST3H3 histone cluster 3, H3
HMCES 5-hydroxymethylcytosine (hmC) binding, ES cell-specific
HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46
HNRNPU-AS1 HNRNPU antisense RNA 1
HPYR1 Helicobacter pylori responsive 1 (non-protein coding)
HS3ST4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4
HSFY2 heat shock transcription factor, Y linked 2
HSPB11 heat shock protein family B (small), member 11
HTATSF1 HIV-1 Tat specific factor 1
IDO1 indoleamine 2,3-dioxygenase 1
IL18RAP interleukin 18 receptor accessory protein
IL19 interleukin 19
IL26 interleukin 26
IQCB1 IQ motif containing B1
ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)
ITGB3BP integrin beta 3 binding protein (beta3-endonexin)
JAKMIP1 janus kinase and microtubule interacting protein 1
KCNJ10 potassium channel, inwardly rectifying subfamily J, member 10
KDM5D lysine (K)-specific demethylase 5D
KDM8 lysine (K)-specific demethylase 8
KIAA0125 KIAA0125
KIAA1407 KIAA1407
KIR2DL4 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 4
KLKB1 kallikrein B, plasma (Fletcher factor) 1
KLRAP1 killer cell lectin-like receptor subfamily A pseudogene 1
KLRB1 killer cell lectin-like receptor subfamily B, member 1
KLRC2 killer cell lectin-like receptor subfamily C, member 2
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KLRF1 killer cell lectin-like receptor subfamily F, member 1
KLRK1 killer cell lectin-like receptor subfamily K, member 1
KNTC1 kinetochore associated 1
KRT18 keratin 18, type I
KRT8 keratin 8, type II
LDHC lactate dehydrogenase C
LEAP2 liver expressed antimicrobial peptide 2
LHFPL4 lipoma HMGIC fusion partner-like 4
LIG1 ligase I, DNA, ATP-dependent
LILRP2 leukocyte immunoglobulin-like receptor pseudogene 2
LINC00244 long intergenic non-protein coding RNA 244
LINC00323 long intergenic non-protein coding RNA 323
LINC00476 long intergenic non-protein coding RNA 476
LINC00596 long intergenic non-protein coding RNA 596
LOC100129055 cyclin Y-like 1 pseudogene
LOC100129550 uncharacterized LOC100129550
LOC100129935 lectin, galactoside-binding, soluble, 14 pseudogene
LOC100130872 uncharacterized LOC100130872
LOC115110 uncharacterized LOC115110
LOC145845 uncharacterized LOC145845
LOC284009 uncharacterized LOC284009
LOC284661 uncharacterized LOC284661
LOC286094
LOC339568 uncharacterized LOC339568
LOC391322 D-dopachrome tautomerase-like
LOC441454 prothymosin, alpha pseudogene
LOC646813 DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene
LOC647859 occludin pseudogene
LOC728554 THO complex 3 pseudogene
LRIT1 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
LY6G5B lymphocyte antigen 6 complex, locus G5B
MAGOH mago-nashi homolog, proliferation-associated (Drosophila)
MAT2B methionine adenosyltransferase II, beta
MBD4 methyl-CpG binding domain protein 4
MBOAT1 membrane bound O-acyltransferase domain containing 1
MC2R melanocortin 2 receptor (adrenocorticotropic hormone)
MCM2 minichromosome maintenance complex component 2
MDK midkine (neurite growth-promoting factor 2)
MEI1 meiosis inhibitor 1
MEIS1 Meis homeobox 1
MID1IP1 MID1 interacting protein 1
MIDN midnolin
MIR600HG MIR600 host gene
MORC4 MORC family CW-type zinc finger 4
MOV10 Mov10 RISC complex RNA helicase
MOV10L1 Mov10 RISC complex RNA helicase like 1
MROH7 maestro heat-like repeat family member 7
MTERF2 mitochondrial transcription termination factor 2
MTF2 metal response element binding transcription factor 2
MUC20 mucin 20, cell surface associated
MYO7A myosin VIIA
MZF1 myeloid zinc finger 1
N4BP2L1 NEDD4 binding protein 2-like 1
N4BP2L2-IT2 N4BPL2 intronic transcript 2
NASP nuclear autoantigenic sperm protein (histone-binding)
NCF1C neutrophil cytosolic factor 1C pseudogene
NCR1 natural cytotoxicity triggering receptor 1
NDUFB4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa
NEFH neurofilament, heavy polypeptide
NEK11 NIMA-related kinase 11
NEUROG3 neurogenin 3
NFIA nuclear factor I/A
NKX2-3 NK2 homeobox 3
NLGN4Y neuroligin 4, Y-linked
NLRC3 NLR family, CARD domain containing 3
NLRC5 NLR family, CARD domain containing 5
NR2F6 nuclear receptor subfamily 2, group F, member 6
NUP210 nucleoporin 210kDa
NXF4 nuclear RNA export factor 4 pseudogene
OR10A4 olfactory receptor, family 10, subfamily A, member 4
OR10A5 olfactory receptor, family 10, subfamily A, member 5
OR10AG1 olfactory receptor, family 10, subfamily AG, member 1
OR10G8 olfactory receptor, family 10, subfamily G, member 8
OR10T2 olfactory receptor, family 10, subfamily T, member 2
OR13D1 olfactory receptor, family 13, subfamily D, member 1
OR1A2 olfactory receptor, family 1, subfamily A, member 2
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR2A2 olfactory receptor, family 2, subfamily A, member 2
OR2B3 olfactory receptor, family 2, subfamily B, member 3
OR3A1 olfactory receptor, family 3, subfamily A, member 1
OR3A4P olfactory receptor, family 3, subfamily A, member 4 pseudogene
OR4F6 olfactory receptor, family 4, subfamily F, member 6
OR4M1 olfactory receptor, family 4, subfamily M, member 1
OR4S1 olfactory receptor, family 4, subfamily S, member 1
OR51A4 olfactory receptor, family 51, subfamily A, member 4
OR51F1 olfactory receptor, family 51, subfamily F, member 1 (gene/pseudogene)
OR51G1 olfactory receptor, family 51, subfamily G, member 1 (gene/pseudogene)
OR52N4 olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OR5H2 olfactory receptor, family 5, subfamily H, member 2
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OR6C6 olfactory receptor, family 6, subfamily C, member 6
OR6S1 olfactory receptor, family 6, subfamily S, member 1
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OR7E156P olfactory receptor, family 7, subfamily E, member 156 pseudogene
OR9G4 olfactory receptor, family 9, subfamily G, member 4
OR9G9 olfactory receptor, family 9, subfamily G, member 9
OVGP1 oviductal glycoprotein 1, 120kDa
OXGR1 oxoglutarate (alpha-ketoglutarate) receptor 1
PARP4 poly (ADP-ribose) polymerase family, member 4
PATE1 prostate and testis expressed 1
PCNAP1 proliferating cell nuclear antigen pseudogene 1
PDCD1 programmed cell death 1
PDE6H phosphodiesterase 6H, cGMP-specific, cone, gamma
PER4 period circadian clock 3 pseudogene
PGBD2 piggyBac transposable element derived 2
PHTF1 putative homeodomain transcription factor 1
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
PLAC8 placenta-specific 8
POC1B POC1 centriolar protein B
PP2D1 protein phosphatase 2C-like domain containing 1
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPP1R12B protein phosphatase 1, regulatory subunit 12B
PPP1R3F protein phosphatase 1, regulatory subunit 3F
PRKY protein kinase, Y-linked, pseudogene
PROZ protein Z, vitamin K-dependent plasma glycoprotein
PRPS2 phosphoribosyl pyrophosphate synthetase 2
PRSS37 protease, serine, 37
PTTG2 pituitary tumor-transforming 2
RACGAP1P Rac GTPase activating protein 1 pseudogene
RAD9A RAD9 homolog A (S. pombe)
RAD9B RAD9 homolog B (S. pombe)
RASSF6 Ras association (RalGDS/AF-6) domain family member 6
RBM15 RNA binding motif protein 15
RBM6 RNA binding motif protein 6
RBP3 retinol binding protein 3, interstitial
RCC2 regulator of chromosome condensation 2
REG1P regenerating islet-derived 1 pseudogene
REV1 REV1, polymerase (DNA directed)
RFPL1S RFPL1 antisense RNA 1
RGAG4 retrotransposon gag domain containing 4
RGS1 regulator of G-protein signaling 1
RHOXF1 Rhox homeobox family, member 1
RIBC2 RIB43A domain with coiled-coils 2
RIC8B RIC8 guanine nucleotide exchange factor B
RMI2 RecQ mediated genome instability 2
RNASE3 ribonuclease, RNase A family, 3
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
RNF133 ring finger protein 133
RNF212 ring finger protein 212
RNF32 ring finger protein 32
RNPC3 RNA-binding region (RNP1, RRM) containing 3
RPA2 replication protein A2, 32kDa
RPAP3 RNA polymerase II associated protein 3
RPL13AP6 ribosomal protein L13a pseudogene 6
RRAGB Ras-related GTP binding B
RRN3P3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 3
RUFY4 RUN and FYVE domain containing 4
SAA3P serum amyloid A3 pseudogene
SAFB2 scaffold attachment factor B2
SAP18 Sin3A-associated protein, 18kDa
SAP30 Sin3A-associated protein, 30kDa
SART3 squamous cell carcinoma antigen recognized by T cells 3
SCAI suppressor of cancer cell invasion
SCGB1D4 secretoglobin, family 1D, member 4
SCNN1A sodium channel, non voltage gated 1 alpha subunit
SCUBE1 signal peptide, CUB domain, EGF-like 1
SELENBP1 selenium binding protein 1
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2
SHCBP1L SHC SH2-domain binding protein 1-like
SIM2 single-minded family bHLH transcription factor 2
SIRPG signal-regulatory protein gamma
SLA Src-like-adaptor
SLC18B1 solute carrier family 18, subfamily B, member 1
SLC22A7 solute carrier family 22 (organic anion transporter), member 7
SLC25A14 solute carrier family 25 (mitochondrial carrier, brain), member 14
SLC51A solute carrier family 51, alpha subunit
SLC6A16 solute carrier family 6, member 16
SLFN13 schlafen family member 13
SNHG12 small nucleolar RNA host gene 12
SNORA36B small nucleolar RNA, H/ACA box 36B
SNORA45B small nucleolar RNA, H/ACA box 45B
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA71B small nucleolar RNA, H/ACA box 71B
SP9 Sp9 transcription factor
SPATA1 spermatogenesis associated 1
SRRM5 serine/arginine repetitive matrix 5
SRSF4 serine/arginine-rich splicing factor 4
SSBP2 single-stranded DNA binding protein 2
STS steroid sulfatase (microsomal), isozyme S
SUGP2 SURP and G patch domain containing 2
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila)
SYTL4 synaptotagmin-like 4
TAF7L TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
TARP TCR gamma alternate reading frame protein
TAS2R42 taste receptor, type 2, member 42
TAS2R43 taste receptor, type 2, member 43
TAS2R46 taste receptor, type 2, member 46
TBC1D3H TBC1 domain family, member 3H
TCTEX1D2 Tctex1 domain containing 2
TERT telomerase reverse transcriptase
TEX30 testis expressed 30
TIMELESS timeless circadian clock
TJP3 tight junction protein 3
TLX3 T-cell leukemia homeobox 3
TM7SF3 transmembrane 7 superfamily member 3
TMEM80 transmembrane protein 80
TMIGD2 transmembrane and immunoglobulin domain containing 2
TMPO thymopoietin
TRAFD1 TRAF-type zinc finger domain containing 1
TRAPPC2 trafficking protein particle complex 2
TRIM69 tripartite motif containing 69
TSC22D3 TSC22 domain family, member 3
TSPYL2 TSPY-like 2
TSSK3 testis-specific serine kinase 3
TTC24 tetratricopeptide repeat domain 24
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
TXLNGY taxilin gamma pseudogene, Y-linked
TXNIP thioredoxin interacting protein
UBA7 ubiquitin-like modifier activating enzyme 7
UBD ubiquitin D
UBXN11 UBX domain protein 11
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast)
USP31 ubiquitin specific peptidase 31
USP33 ubiquitin specific peptidase 33
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
VRK3 vaccinia related kinase 3
WDR6 WD repeat domain 6
WDR87 WD repeat domain 87
WDR90 WD repeat domain 90
WDTC1 WD and tetratricopeptide repeats 1
WEE1 WEE1 G2 checkpoint kinase
WFDC11 WAP four-disulfide core domain 11
XCL2 chemokine (C motif) ligand 2
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
ZCCHC8 zinc finger, CCHC domain containing 8
ZDHHC23 zinc finger, DHHC-type containing 23
ZFR2 zinc finger RNA binding protein 2
ZMAT1 zinc finger, matrin-type 1
ZNF326 zinc finger protein 326
ZNF541 zinc finger protein 541
ZNF554 zinc finger protein 554
ZNF683 zinc finger protein 683
ZNF763 zinc finger protein 763
ZNF80 zinc finger protein 80
ZYG11A zyg-11 family member A, cell cycle regulator